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Properties
Property Name | Value |
TranscriptId | 165640 |
Track | FilteredModels2 |
ProteinId | 165554 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_21 | supercontig | scaffold_21:26567..29700 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7668 ID=mRNA_7668|Name=jgi.p|Nanoce1779_2|165554|organism=Nannochloropsis oceanica|type=mRNA|length=2289bp ATGTGCCTGCCTGTTGAGATGTAAGCGGTCTTTGATGAGAGCCACATTTC GCGAATCTCAAGTCAGGAAGCACATCCTTGACGACAACGACAAGCATGAG CAGCAGCGGAAAGGGCAAAGGGCGTTCGTCCATGGGAAGCTCTGCTGCGG GCAGCAGCGACGCCGAGCGCAGCTCCCCTTTAAAGGCCCACAACAGGAAA GCGCAAGAGGACGACGCTGAGTACTACGGCCTAACAAGCGTGGGCACCTT GATTGTCCGGATCGTAGCCGCTCGGGGCTTGCCGGCTGCGATTGCGGGAG GATTCTTCTCGAGCGGATCTTCGAATCCCTATGCCTTGTTGGAGTTTGAG GGGAGCACGCAAGGCTCGTCGGTGGTCCCCAATACACTTGATCCGGTCTG GTCTCGGGAGCAATATTTCTTTCAGGTCAAGATGCCGGTGATGCATGCGG AGGATGGGGAATGTGGATGGGACGGTGGAGGGGGAGGGGCATGCAGCAGC CGGCTCAAGAGAGAATTAAAAAGCGAAGGAAGGGAAGGAAGAAGAGGAGG AGGAGGAGGAGGAGGAGGAGGAGGACAGGTGTGGAAGGATGATGCGGGCG ATTTCAAAAAGATGCCTAAGGGTGAGGGAGAAGATAGAATGACCATGTTC AGTAGCTCGGAGCCGCACTTGTACATAAGACTGGTGCATCGCAGTGGGGA GGGTGCAGCCGTGTCTACTCCCTCCGTCACTCCTACTGTTGGCACTTCCG CTCCTGCTGCTTCTTCGTCAAGAGGGGCCACGTCAAGCTTCCCCCCCGGG GGCCGAGGCAGCAGCCGTCAGGTGCAACAGCAGCATCAGCGGCGAGATGC TGTCAAGGATCCCACCGTTTTCACCAAGCCCGGCAAAGGTCCGAAACGCA GCAGCAGCAGCAGCAGCAGCAGCCACAGCAGTAGTATTCCCGCAGGCGAT AAGCTCCTAGGAGAGGCCTTCGTCAACATTGTCGACCTCACCACCGCCCG TGCGAAGACTCTCGACGAGTGGTTCCCTCTCAGCGAGGGCGGAGCTGTGA GGTTGGCTGTTGAGTATGACGTGCTGGAACCCCCGCCGGCCATCGGCGAG ACCGTCCGCCTCATCGGTTTCGGTGCCGCGGAGGACCTGTGGCCCCTCCC TCTCAAGGACGAGATGGTTGTCGAGCAATACGTGGATGCCAACATGGACC GCCTGATGGTCTCGTACATTACCTCCGAGGGATGGAAGTGCATGGCTGAA GTTCATCGCTTCCACGTGTTGTCTGCGGGGAGGCACAAGACCGTCGTGCA CGAATACCAAAATAAAGCCCTTGACCTTGCCTTGGCTCTGCAGGAGATGC CGGCCGCACAGGCCGTGGGCGACGTGCTGGATAAACTGTGTGATGGGGCC CCGGCGATGGATGTCATGAACGAGGTGATTGAGAGGATGGGGGGATTGCA GGAGCGGTGGTGGGAGGGAGGGTTGGGCTTGGCGTTGTCTGATGTGGCCA GGGCGTTTCAATTGCCCGATATGCCAACTTATGGAGCGGGGGAAGGTGGA GTAGGGAAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGAGGGAACAGCG TGTGGTGTACGGGCAGGAGAAAGGGAGGGAGGTGGATGTGTATGAGGAGG AAGACGAGGGAGGGGCGTATCAGTTTGAGTTCTTGCCCAGAGAAATGTTG GCAAGAATTTCATGTCCTATCACGAGCTTGCCGATGCGAGATCCAGTGAG TGCGGCGGACGGACATACGTATGAAAGAAATGCGATTCTGAGGTGGTTTG CTTCTTGCAGGGAACAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG GGGGACGGAGGGCGGAAAAGAGGGGAGGAGGAGGAAGGAGGGCAGAAACG AGGGAAGGGAAATAAGTTTAGGAGTCCTGTGACGGGGGTGGTATTGGAGA CCATTCAAGTGTTTGATTGTCGGGCCATGCGGGAGACGATTGAAGAGATG AAGGTGAAGAATGAGGAGTTAAGACGGGCGGCAGAAAGAGGAGGAGGAGA AAAAGGAGGATGGATGAAGATGTAGAACAGGCGCCAGGACCGTCGCTGGT GACGCCTGTGCTCGCTGAAGCAGGAGGAAATCATGAATCAGGAAAAAGCA AGCAAGGCCCCATTCCCACCCTTACTGCTCCTGCGTCCCCACCTCACTCA AATCTTGCCCTCCCTCCCTCCTCTCCCGCGCCCTCGCCTATTCTACCCGT CGGTGCTGCCATTGCTGCTAATGCCCTTCCTCCCTCGAT back to topprotein sequence of jgi.p|Nanoce1779_2|165554 >mRNA_7668-protein ID=mRNA_7668-protein|Name=jgi.p|Nanoce1779_2|165554|organism=Nannochloropsis oceanica|type=polypeptide|length=660bp MSSSGKGKGRSSMGSSAAGSSDAERSSPLKAHNRKAQEDDAEYYGLTSVG TLIVRIVAARGLPAAIAGGFFSSGSSNPYALLEFEGSTQGSSVVPNTLDP VWSREQYFFQVKMPVMHAEDGECGWDGGGGGACSSRLKRELKSEGREGRR GGGGGGGGGGQVWKDDAGDFKKMPKGEGEDRMTMFSSSEPHLYIRLVHRS GEGAAVSTPSVTPTVGTSAPAASSSRGATSSFPPGGRGSSRQVQQQHQRR DAVKDPTVFTKPGKGPKRSSSSSSSSHSSSIPAGDKLLGEAFVNIVDLTT ARAKTLDEWFPLSEGGAVRLAVEYDVLEPPPAIGETVRLIGFGAAEDLWP LPLKDEMVVEQYVDANMDRLMVSYITSEGWKCMAEVHRFHVLSAGRHKTV VHEYQNKALDLALALQEMPAAQAVGDVLDKLCDGAPAMDVMNEVIERMGG LQERWWEGGLGLALSDVARAFQLPDMPTYGAGEGGVGKEEEEEEEEEERE QRVVYGQEKGREVDVYEEEDEGGAYQFEFLPREMLARISCPITSLPMRDP VSAADGHTYERNAILRWFASCREQEEEEEEEEEEEGDGGRKRGEEEEGGQ KRGKGNKFRSPVTGVVLETIQVFDCRAMRETIEEMKVKNEELRRAAERGG GEKGGWMKM* back to topmRNA from alignment at scaffold_21:26567..29700- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7668 ID=mRNA_7668|Name=jgi.p|Nanoce1779_2|165554|organism=Nannochloropsis oceanica|type=mRNA|length=3134bp|location=Sequence derived from alignment at scaffold_21:26567..29700- (Nannochloropsis oceanica) ATGTGCCTGCCTGTTGAGATGTAAGCGGTCTTTGATGAGAGCCACATTTC
GCGAATCTCAAGTCAGGTAAGTTACGAATGTCCTCCTCGATGCTTCTTCT
TATAGTGCCTGGACTGTAGTGTGGTCTACGGTGTGAATTTTGAGGGACGG
AGTAGCCCGACAAATGAGGAGACCGACCATCGCCGAAAGGGAGTGGCGTT
TTGCGAGCGACGGGGCAGCGCCTTCTTTGCTTGTCACAAGCAGAAGCACA
AAGCCGCCGCGGCGCCACCCTTTTAGTGTTCACACGGAGGACTGTGCGTG
CTTCCGGGTGATGTCGATAATGGTTTACAGGCTTTGGATGGTGATCCCTT
CATTTCACAACCCGCCGGCCTTTACTATCGGAGGCACACCCTGTCTTGAT
ACAGCGCTTCGATTCTCACCCTTTCCTTTCCCGTGCCACATTCACAGGAA
GCACATCCTTGACGACAACGACAAGCATGAGCAGCAGCGGAAAGGGCAAA
GGGCGTTCGTCCATGGGAAGCTCTGCTGCGGGCAGCAGCGACGCCGAGCG
CAGCTCCCCTTTAAAGGCCCACAACAGGAAAGCGCAAGAGGACGACGCTG
AGTACTACGGCCTAACAAGCGTGGGCACCTTGATTGTCCGGATCGTAGCC
GCTCGGGGCTTGCCGGCTGCGATTGCGGGAGGATTCTTCTCGAGCGGATC
TTCGAATCCCTATGCCTTGTTGGAGTTTGAGGGGAGCACGCAAGGCTCGT
CGGTGGTCCCCAATACACTTGATCCGGTCTGGTCTCGGGAGCAATATTTC
TTTCAGGTCAAGATGCCGGTGATGCATGCGGAGGATGGGGAATGTGGATG
GGACGGTGGAGGGGGAGGGGCATGCAGCAGCCGGCTCAAGAGAGAATTAA
AAAGCGAAGGAAGGGAAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGACAGGTGTGGAAGGATGATGCGGGCGATTTCAAAAAGATGCCTAA
GGGTGAGGGAGAAGATAGAATGACCATGTTCAGTAGCTCGGAGCCGCACT
TGTACATAAGACTGGTGCATCGCAGTGGGGAGGGTGCAGCCGTGTCTACT
CCCTCCGTCACTCCTACTGTTGGCACTTCCGCTCCTGCTGCTTCTTCGTC
AAGAGGGGCCACGTCAAGCTTCCCCCCCGGGGGCCGAGGCAGCAGCCGTC
AGGTGCAACAGCAGCATCAGCGGCGAGATGCTGTCAAGGATCCCACCGTT
TTCACCAAGCCCGGCAAAGGTCCGAAACGCAGCAGCAGCAGCAGCAGCAG
CAGCCACAGCAGTAGTATTCCCGCAGGCGATAAGCTCCTAGGAGAGGCCT
TCGTCAACATTGTCGACCTCACCACCGCCCGTGCGAAGACTCTCGACGAG
TGGTTCCCTCTCAGCGAGGGCGGAGCTGTGAGGTTGGCTGTTGAGTATGA
CGTGCTGGAACCCCCGCCGGCCATCGGCGAGACCGTCCGCCTCATCGGTT
TCGGTGCCGCGGAGGACCTGTGGCCCCTCCCTCTCAAGGACGAGATGGTT
GTCGAGCAATACGTGGATGCCAACATGGACCGCCTGATGGTCTCGTACAT
TACCTCCGAGGGATGGAAGTGCATGGCTGAAGTTCATCGCTTCCACGTGT
TGTCTGCGGGGAGGCACAAGACCGTCGTGCACGAATACCAAAATAAAGCC
CTTGACCTTGCCTTGGCTCTGCAGGAGATGCCGGCCGCACAGGCCGTGGG
CGACGTGCTGGATAAACTGTGTGATGGGGCCCCGGCGATGGATGTCATGA
ACGAGGTGATTGAGAGGATGGGGGGATTGCAGGAGCGGTGGTGGGAGGGA
GGGTTGGGCTTGGCGTTGTCTGATGTGGCCAGGGCGTTTCAATTGCCCGA
TATGCCAACTTATGGAGCGGGGGAAGGTGGAGTAGGGAAGGAGGAAGAGG
AGGAGGAGGAGGAGGAGGAGAGGGAACAGCGTGTGGTGTACGGGCAGGAG
AAAGGGAGGGAGGTGGATGTGTATGAGGAGGAAGACGAGGGAGGGGCGTA
TCAGTTTGAGTTCTTGCCCAGAGAAATGTTGGCAAGAATTTCATGTCCTA
TCACGAGCTTGCCGATGCGAGATCCAGTGAGTGCGGCGGACGGACATACG
TATGAAAGAAATGCGATTCTGAGGTGGTTTGCTTCTTGCAGGGAACAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGACGGAGGGCGGAAAA
GAGGGGAGGAGGAGGAAGGAGGGCAGAAACGAGGGAAGGGAAATAAGTTT
AGGAGTCCTGTGACGGGGGTGGTATTGGAGACCATTCAAGTGTTTGATTG
TCGGGCCATGCGGGAGACGATTGAAGAGATGAAGGTGAAGAATGAGGAGT
TAAGACGGGCGGCAGAAAGAGGAGGAGGAGAAAAAGGAGGATGGAGTGGA
GGATTGACGAGGAGGTTGATGGAGGAGGAGGAAGAGAGGGAGGAGGAGAA
GGAGGAGGAGGAGGAAGGGGAGGAGGAGGAGGCGGTGAAGGAGGAGGAGG
AAGAGGATGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAAGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGGGGAGTCGAACAAAGGAGAAGTGAAAGG
AAAACGCAGAAGGTGGAGGTTGAAGGGAGGAGGAGGAGGAGGAGGAGGCG
GAAGAAGAGATGGAGGAGGAGGAGGAGGTGGTGGAGGAGGATGAGGAGAT
GAAGGGGATGGAGGAGGAGAAGGAGGAGGAGGGGGAGGAAGAGTTGGAGG
AGGATATGGAGGAGGAGGATGAAAATGGGCAACGACGACAAGAGGACTGG
GGAGGGGAGTGAAGATGTAGAACAGGCGCCAGGACCGTCGCTGGTGACGC
CTGTGCTCGCTGAAGCAGGAGGAAATCATGAATCAGGAAAAAGCAAGCAA
GGCCCCATTCCCACCCTTACTGCTCCTGCGTCCCCACCTCACTCAAATCT
TGCCCTCCCTCCCTCCTCTCCCGCGCCCTCGCCTATTCTACCCGTCGGTG
CTGCCATTGCTGCTAATGCCCTTCCTCCCTCGAT back to topCoding sequence (CDS) from alignment at scaffold_21:26567..29700- >mRNA_7668 ID=mRNA_7668|Name=jgi.p|Nanoce1779_2|165554|organism=Nannochloropsis oceanica|type=CDS|length=3960bp|location=Sequence derived from alignment at scaffold_21:26567..29700- (Nannochloropsis oceanica) TGAAGATGTAGATGAGCAGCAGCGGAAAGGGCAAAGGGCGTTCGTCCATG GGAAGCTCTGCTGCGGGCAGCAGCGACGCCGAGCGCAGCTCCCCTTTAAA GGCCCACAACAGGAAAGCGCAAGAGGACGACGCTGAGTACTACGGCCTAA CAAGCGTGGGCACCTTGATTGTCCGGATCGTAGCCGCTCGGGGCTTGCCG GCTGCGATTGCGGGAGGATTCTTCTCGAGCGGATCTTCGAATCCCTATGC CTTGTTGGAGTTTGAGGGGAGCACGCAAGGCTCGTCGGTGGTCCCCAATA CACTTGATCCGGTCTGGTCTCGGGAGCAATATTTCTTTCAGGTCAAGATG CCGGTGATGCATGCGGAGGATGGGGAATGTGGATGGGACGGTGGAGGGGG AGGGGCATGCAGCAGCCGGCTCAAGAGAGAATTAAAAAGCGAAGGAAGGG AAGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACAGGTGTGG AAGGATGATGCGGGCGATTTCAAAAAGATGCCTAAGGGTGAGGGAGAAGA TAGAATGACCATGTTCAGTAGCTCGGAGCCGCACTTGTACATAAGACTGG TGCATCGCAGTGGGGAGGGTGCAGCCGTGTCTACTCCCTCCGTCACTCCT ACTGTTGGCACTTCCGCTCCTGCTGCTTCTTCGTCAAGAGGGGCCACGTC AAGCTTCCCCCCCGGGGGCCGAGGCAGCAGCCGTCAGGTGCAACAGCAGC ATCAGCGGCGAGATGCTGTCAAGGATCCCACCGTTTTCACCAAGCCCGGC AAAGGTCCGAAACGCAGCAGCAGCAGCAGCAGCAGCAGCCACAGCAGTAG TATTCCCGCAGGCGATAAGCTCCTAGGAGAGGCCTTCGTCAACATTGTCG ACCTCACCACCGCCCGTGCGAAGACTCTCGACGAGTGGTTCCCTCTCAGC GAGGGCGGAGCTGTGAGGTTGGCTGTTGAGTATGACGTGCTGGAACCCCC GCCGGCCATCGGCGAGACCGTCCGCCTCATCGGTTTCGGTGCCGCGGAGG ACCTGTGGCCCCTCCCTCTCAAGGACGAGATGGTTGTCGAGCAATACGTG GATGCCAACATGGACCGCCTGATGGTCTCGTACATTACCTCCGAGGGATG GAAGTGCATGGCTGAAGTTCATCGCTTCCACGTGTTGTCTGCGGGGAGGC ACAAGACCGTCGTGCACGAATACCAAAATAAAGCCCTTGACCTTGCCTTG GCTCTGCAGGAGATGCCGGCCGCACAGGCCGTGGGCGACGTGCTGGATAA ACTGTGTGATGGGGCCCCGGCGATGGATGTCATGAACGAGGTGATTGAGA GGATGGGGGGATTGCAGGAGCGGTGGTGGGAGGGAGGGTTGGGCTTGGCG TTGTCTGATGTGGCCAGGGCGTTTCAATTGCCCGATATGCCAACTTATGG AGCGGGGGAAGGTGGAGTAGGGAAGGAGGAAGAGGAGGAGGAGGAGGAGG AGGAGAGGGAACAGCGTGTGGTGTACGGGCAGGAGAAAGGGAGGGAGGTG GATGTGTATGAGGAGGAAGACGAGGGAGGGGCGTATCAGTTTGAGTTCTT GCCCAGAGAAATGTTGGCAAGAATTTCATGTCCTATCACGAGCTTGCCGA TGCGAGATCCAGTGAGTGCGGCGGACGGACATACGTATGAAAGAAATGCG ATTCTGAGGTGGTTTGCTTCTTGCAGGGAACAGGAGGAGGAGGAGGAGGA GGAGGAGGAGGAGGAGGGGGACGGAGGGCGGAAAAGAGGGGAGGAGGAGG AAGGAGGGCAGAAACGAGGGAAGGGAAATAAGTTTAGGAGTCCTGTGACG GGGGTGGTATTGGAGACCATTCAAGTGTTTGATTGTCGGGCCATGCGGGA GACGATTGAAGAGATGAAGGTGAAGAATGAGGAGTTAAGACGGGCGGCAG AAAGAGGAGGAGGAGAAAAAGGAGGATGGATGAAGATGTAGATGAGCAGC AGCGGAAAGGGCAAAGGGCGTTCGTCCATGGGAAGCTCTGCTGCGGGCAG CAGCGACGCCGAGCGCAGCTCCCCTTTAAAGGCCCACAACAGGAAAGCGC AAGAGGACGACGCTGAGTACTACGGCCTAACAAGCGTGGGCACCTTGATT GTCCGGATCGTAGCCGCTCGGGGCTTGCCGGCTGCGATTGCGGGAGGATT CTTCTCGAGCGGATCTTCGAATCCCTATGCCTTGTTGGAGTTTGAGGGGA GCACGCAAGGCTCGTCGGTGGTCCCCAATACACTTGATCCGGTCTGGTCT CGGGAGCAATATTTCTTTCAGGTCAAGATGCCGGTGATGCATGCGGAGGA TGGGGAATGTGGATGGGACGGTGGAGGGGGAGGGGCATGCAGCAGCCGGC TCAAGAGAGAATTAAAAAGCGAAGGAAGGGAAGGAAGAAGAGGAGGAGGA GGAGGAGGAGGAGGAGGAGGACAGGTGTGGAAGGATGATGCGGGCGATTT CAAAAAGATGCCTAAGGGTGAGGGAGAAGATAGAATGACCATGTTCAGTA GCTCGGAGCCGCACTTGTACATAAGACTGGTGCATCGCAGTGGGGAGGGT GCAGCCGTGTCTACTCCCTCCGTCACTCCTACTGTTGGCACTTCCGCTCC TGCTGCTTCTTCGTCAAGAGGGGCCACGTCAAGCTTCCCCCCCGGGGGCC GAGGCAGCAGCCGTCAGGTGCAACAGCAGCATCAGCGGCGAGATGCTGTC AAGGATCCCACCGTTTTCACCAAGCCCGGCAAAGGTCCGAAACGCAGCAG CAGCAGCAGCAGCAGCAGCCACAGCAGTAGTATTCCCGCAGGCGATAAGC TCCTAGGAGAGGCCTTCGTCAACATTGTCGACCTCACCACCGCCCGTGCG AAGACTCTCGACGAGTGGTTCCCTCTCAGCGAGGGCGGAGCTGTGAGGTT GGCTGTTGAGTATGACGTGCTGGAACCCCCGCCGGCCATCGGCGAGACCG TCCGCCTCATCGGTTTCGGTGCCGCGGAGGACCTGTGGCCCCTCCCTCTC AAGGACGAGATGGTTGTCGAGCAATACGTGGATGCCAACATGGACCGCCT GATGGTCTCGTACATTACCTCCGAGGGATGGAAGTGCATGGCTGAAGTTC ATCGCTTCCACGTGTTGTCTGCGGGGAGGCACAAGACCGTCGTGCACGAA TACCAAAATAAAGCCCTTGACCTTGCCTTGGCTCTGCAGGAGATGCCGGC CGCACAGGCCGTGGGCGACGTGCTGGATAAACTGTGTGATGGGGCCCCGG CGATGGATGTCATGAACGAGGTGATTGAGAGGATGGGGGGATTGCAGGAG CGGTGGTGGGAGGGAGGGTTGGGCTTGGCGTTGTCTGATGTGGCCAGGGC GTTTCAATTGCCCGATATGCCAACTTATGGAGCGGGGGAAGGTGGAGTAG GGAAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGAGGGAACAGCGTGTG GTGTACGGGCAGGAGAAAGGGAGGGAGGTGGATGTGTATGAGGAGGAAGA CGAGGGAGGGGCGTATCAGTTTGAGTTCTTGCCCAGAGAAATGTTGGCAA GAATTTCATGTCCTATCACGAGCTTGCCGATGCGAGATCCAGTGAGTGCG GCGGACGGACATACGTATGAAAGAAATGCGATTCTGAGGTGGTTTGCTTC TTGCAGGGAACAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGG ACGGAGGGCGGAAAAGAGGGGAGGAGGAGGAAGGAGGGCAGAAACGAGGG AAGGGAAATAAGTTTAGGAGTCCTGTGACGGGGGTGGTATTGGAGACCAT TCAAGTGTTTGATTGTCGGGCCATGCGGGAGACGATTGAAGAGATGAAGG TGAAGAATGAGGAGTTAAGACGGGCGGCAGAAAGAGGAGGAGGAGAAAAA GGAGGATGGA back to top
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