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Properties
| Property Name | Value |
|---|
| TranscriptId | 599520 |
| Track | FilteredModels2 |
| ProteinId | 599434 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_20 | supercontig | scaffold_20:435616..436935 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7633 ID=mRNA_7633|Name=jgi.p|Nanoce1779_2|599434|organism=Nannochloropsis oceanica|type=mRNA|length=711bp
CAACAGATATCCCGCTCGCCGTGTACTACAGCGACAAGCAGACGCAAGCT
TTTACCATGTCGTCTTTCGCTGACCCAGGAGATCTTGAACCAACAGATGT
GACGGAGGAAGAGTTCCAACAGGTGGAGGAGGAAGAAGAGGATGGCGTGC
CGCGCTCGGCATTGCATGAGAGTATCAAGAGGAAAGGCATCAACAGCTAC
TACTACGCGCACAGCAAGCAGAATCACGCCCCTGACTGGGATGGCCGTGA
AGCGCCTCGATTAATGTCGAAGCAGGCGTTGGAAGTAGGAGTAGGGAGAG
AGCCCGAGTCTATCCGCTCGTATGCCTGGAGTGACGAGAACGAGAAGATC
AAAATCTACGTGACGATGGAGGGCGCCGACGCGCTAGGCGACGAGGCCAT
TACTTTGGAGTGGAACGAGCTTTCCCTCATCCTTACTGTTCAATTTCCTG
ATAGCAAGACCCATCTTTTCCTAATCAAGCGGCTCTACGACGAGATCGAT
GATGCTTCTTTCCGTGTCAAGAAAGATAAGATTATTCTGAACCTGAAGAA
AAAGGAGGGCAAGACAGCGGCATGGTTCGATCTCAAGAAGGACTTCTGAG
ACCAGGGAGGGAGGGATAGAGGGAGGGATGGAGGAAGGGAGGAAGGGAGT
GAGGGTTGTACCGTGGAAGAGGAAATTGGTGTGTGTCCTGTCGTTTTGAG
AAGGAAGATGA back to topprotein sequence of jgi.p|Nanoce1779_2|599434 >mRNA_7633-protein ID=mRNA_7633-protein|Name=jgi.p|Nanoce1779_2|599434|organism=Nannochloropsis oceanica|type=polypeptide|length=181bp
MSSFADPGDLEPTDVTEEEFQQVEEEEEDGVPRSALHESIKRKGINSYYY
AHSKQNHAPDWDGREAPRLMSKQALEVGVGREPESIRSYAWSDENEKIKI
YVTMEGADALGDEAITLEWNELSLILTVQFPDSKTHLFLIKRLYDEIDDA
SFRVKKDKIILNLKKKEGKTAAWFDLKKDF* back to topmRNA from alignment at scaffold_20:435616..436935- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7633 ID=mRNA_7633|Name=jgi.p|Nanoce1779_2|599434|organism=Nannochloropsis oceanica|type=mRNA|length=1320bp|location=Sequence derived from alignment at scaffold_20:435616..436935- (Nannochloropsis oceanica)
CAACAGATATCCCGCTCGCCGTGTACTACAGCGACAAGCAGACGCAAGCT
TTTACCATGTCGTCTTTCGCTGACCCAGGAGATCTTGAACCAACAGATGT
GACGGAGGAAGAGTTCCAACAGGTGGAGGAGGAAGAAGAGGATGGCGTGC
CGCGCTCGGCATTGCATGAGAGTATCAAGAGGAAAGGCATCAACAGCTAC
TACTACGCGCACAGCAAGCAGAATCGTGAGTGGGAGGAAAGGAGGTGATA
GGAGAAGCGCTTTGCAAAATGAAGTCCGATGCCCACCTTTCTTCCTCTCC
TCCCTCCCCTTCCTCCCACTTGTCAGACGCCCCTGACTGGGATGGCCGTG
AAGCGCCTCGATTAATGTCGAAGCAGGCGTTGGAAGTAGGAGTAGGGAGA
GAGCCCGAGTCTATCCGCTCGTATGCCTGGAGTGACGAGAACGAGAAGAT
CAAGTAAGGAGGGGGGGAGGCAGGGAGGGAGGGAGGGAATAATTTATACA
TGATTCAACATGTTGACAACTCTCGTATACCCTCCCTCCCTTCCTCTCTT
CGTTCTATCAGAATCTACGTGACGATGGAGGGCGCCGACGCGCTAGGCGA
CGAGGCCATTACTTTGGAGTGGAACGAGCTTTCCCTCATCCTTACTGTTC
AATTTCCTGATAGCAAGGCAAGTCCTTGTCCTACACCCTCTCTCATTTCA
TTTATTTCATTCCGTCATCCCTCTCTTCTTCTCCCATTCTTTTTCTGAGT
GGATTGAATTACTTATTATTCTCACGGTGCGAGCGCCCGAGATCAAGGTC
TATCCTTCCCTCGTCTTCCCGCCCTCCCTTCCTCCCTCTCTCCCTCCCTC
CCTCCCTCCCTTCCTTCTTCCCTCCCTACCTCAAGAGCCAATTTATGTGA
TGAAGCGGCTCTACTACTTTAACAGAGGTGCTTAGTATGCTTTTTGTGTC
GGAAATTCAAGATCAATCATAACCTTCAGGATAAGCGAAGAAAAACGTAC
CCACGCCCTCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TTCCTCCCTCCTTTCAGACCCATCTTTTCCTAATCAAGCGGCTCTACGAC
GAGATCGATGATGCTTCTTTCCGTGTCAAGAAAGATAAGATTATTCTGAA
CCTGAAGAAAAAGGAGGGCAAGACAGCGGCATGGTTCGATCTCAAGAAGG
ACTTCTGAGACCAGGGAGGGAGGGATAGAGGGAGGGATGGAGGAAGGGAG
GAAGGGAGTGAGGGTTGTACCGTGGAAGAGGAAATTGGTGTGTGTCCTGT
CGTTTTGAGAAGGAAGATGA back to topCoding sequence (CDS) from alignment at scaffold_20:435616..436935- >mRNA_7633 ID=mRNA_7633|Name=jgi.p|Nanoce1779_2|599434|organism=Nannochloropsis oceanica|type=CDS|length=2172bp|location=Sequence derived from alignment at scaffold_20:435616..436935- (Nannochloropsis oceanica)
ACCCATCTTTTCCTAATCAAGCGGCTCTACGACGAGATCGATGATGCTTC
TTTCCGTGTCAAGAAAGATAAGATTATTCTGAACCTGAAGAAAAAGGAGG
GCAAGACAGCGGCATGGTTCGATCTCAAGAAGGACTTCTGAAATCTACGT
GACGATGGAGGGCGCCGACGCGCTAGGCGACGAGGCCATTACTTTGGAGT
GGAACGAGCTTTCCCTCATCCTTACTGTTCAATTTCCTGATAGCAAGACG
CCCCTGACTGGGATGGCCGTGAAGCGCCTCGATTAATGTCGAAGCAGGCG
TTGGAAGTAGGAGTAGGGAGAGAGCCCGAGTCTATCCGCTCGTATGCCTG
GAGTGACGAGAACGAGAAGATCAAATGTCGTCTTTCGCTGACCCAGGAGA
TCTTGAACCAACAGATGTGACGGAGGAAGAGTTCCAACAGGTGGAGGAGG
AAGAAGAGGATGGCGTGCCGCGCTCGGCATTGCATGAGAGTATCAAGAGG
AAAGGCATCAACAGCTACTACTACGCGCACAGCAAGCAGAATCACCCATC
TTTTCCTAATCAAGCGGCTCTACGACGAGATCGATGATGCTTCTTTCCGT
GTCAAGAAAGATAAGATTATTCTGAACCTGAAGAAAAAGGAGGGCAAGAC
AGCGGCATGGTTCGATCTCAAGAAGGACTTCTGAAATCTACGTGACGATG
GAGGGCGCCGACGCGCTAGGCGACGAGGCCATTACTTTGGAGTGGAACGA
GCTTTCCCTCATCCTTACTGTTCAATTTCCTGATAGCAAGACGCCCCTGA
CTGGGATGGCCGTGAAGCGCCTCGATTAATGTCGAAGCAGGCGTTGGAAG
TAGGAGTAGGGAGAGAGCCCGAGTCTATCCGCTCGTATGCCTGGAGTGAC
GAGAACGAGAAGATCAAATGTCGTCTTTCGCTGACCCAGGAGATCTTGAA
CCAACAGATGTGACGGAGGAAGAGTTCCAACAGGTGGAGGAGGAAGAAGA
GGATGGCGTGCCGCGCTCGGCATTGCATGAGAGTATCAAGAGGAAAGGCA
TCAACAGCTACTACTACGCGCACAGCAAGCAGAATCACCCATCTTTTCCT
AATCAAGCGGCTCTACGACGAGATCGATGATGCTTCTTTCCGTGTCAAGA
AAGATAAGATTATTCTGAACCTGAAGAAAAAGGAGGGCAAGACAGCGGCA
TGGTTCGATCTCAAGAAGGACTTCTGAAATCTACGTGACGATGGAGGGCG
CCGACGCGCTAGGCGACGAGGCCATTACTTTGGAGTGGAACGAGCTTTCC
CTCATCCTTACTGTTCAATTTCCTGATAGCAAGACGCCCCTGACTGGGAT
GGCCGTGAAGCGCCTCGATTAATGTCGAAGCAGGCGTTGGAAGTAGGAGT
AGGGAGAGAGCCCGAGTCTATCCGCTCGTATGCCTGGAGTGACGAGAACG
AGAAGATCAAATGTCGTCTTTCGCTGACCCAGGAGATCTTGAACCAACAG
ATGTGACGGAGGAAGAGTTCCAACAGGTGGAGGAGGAAGAAGAGGATGGC
GTGCCGCGCTCGGCATTGCATGAGAGTATCAAGAGGAAAGGCATCAACAG
CTACTACTACGCGCACAGCAAGCAGAATCACCCATCTTTTCCTAATCAAG
CGGCTCTACGACGAGATCGATGATGCTTCTTTCCGTGTCAAGAAAGATAA
GATTATTCTGAACCTGAAGAAAAAGGAGGGCAAGACAGCGGCATGGTTCG
ATCTCAAGAAGGACTTCTGAAATCTACGTGACGATGGAGGGCGCCGACGC
GCTAGGCGACGAGGCCATTACTTTGGAGTGGAACGAGCTTTCCCTCATCC
TTACTGTTCAATTTCCTGATAGCAAGACGCCCCTGACTGGGATGGCCGTG
AAGCGCCTCGATTAATGTCGAAGCAGGCGTTGGAAGTAGGAGTAGGGAGA
GAGCCCGAGTCTATCCGCTCGTATGCCTGGAGTGACGAGAACGAGAAGAT
CAAATGTCGTCTTTCGCTGACCCAGGAGATCTTGAACCAACAGATGTGAC
GGAGGAAGAGTTCCAACAGGTGGAGGAGGAAGAAGAGGATGGCGTGCCGC
GCTCGGCATTGCATGAGAGTATCAAGAGGAAAGGCATCAACAGCTACTAC
TACGCGCACAGCAAGCAGAATC back to top
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