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Properties
| Property Name | Value |
|---|
| TranscriptId | 627693 |
| Track | FilteredModels2 |
| ProteinId | 627607 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_3 | supercontig | scaffold_3:203155..206532 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_76 ID=mRNA_76|Name=jgi.p|Nanoce1779_2|627607|organism=Nannochloropsis oceanica|type=mRNA|length=2616bp
GGACAATTTCTGCGGTTTCTTCTCTCAACCACCCACACAATAGTACGAAA
GTACAGGGAAATTGTCTACTGTCCCATGTTATTCCTGCCTCGCCATCGGC
GATGAGCAGGCGATGTGGAGTGCGTGGCTGGTCTCGTCATGCCTCCTTTC
TTCGTTCCTCAGCTCATTTGAACACCCGTTCCCCCTACACCTAACACAGC
AAGCGCGTCGCGCCTTTTTGTGTTGCCGCTGCACTCTATACGCACATTCT
CTTTAAATATACGATGTCCTCCTTCTTGCGTTGGCCTCGTCGCTCCAGGA
CTCCTAAACGTACTGCCGCTGCACCTCCCACCGCAGCAGGCACCACGGCC
ACCATCCTGTGCGATGGCCTGCGCCTTGACAGCAGCAGCAGTAGCATCAA
CGCCAGCAGTAGCAGTGACAGCAACGTCGACAGCAAGACCGAATCGATGG
GGAGCAGCACCGACGAGAGCCCCCCGACTTCCCCCCAGACCACCTCCAAA
GCTCTCACGCTCACCCTTGGCGACGTCTGCCCCGGCACTCGCCTAACCTT
GCCTTGGTGGGAAGAAGCACTGCTCCTCCCCTGCTTCGTTGTGCTGTGTG
CCCCCATCTTTTCATTTATGATGCTTGGCCTATCGTTTGTGCCATTTTTC
GGGTGGGTGAGGGCCAGCACTAGCTACCTCTCCGCATTCTCCTTCTACTG
GGTCCTGCTATACTTCGACCTCGTCCCTCGCCGGGAACGCCTTAGTCCTC
CCTGCCTCTCTACCTGGTTCCTGCGGGCCATGGTGCGGTACTTCAACTAT
TTTGTCATTGTCGAAGATCCTTCCTCCATCCAGCCCTCCACTCCCTACAT
CGGTGTGCAGAGCCCGCACGGCATTTATCCCATTGCAAGCGTCTGTGCCG
CTCCCTTCAGCCCCAGTCTCTTCCGAGGCCGCGATTCATATTGTATGGCG
GCGTCGGCGTTGCAGTTGCAGCCTTTTTTGTGGCAATGGCTGGAGACACT
GGGGGGGCGACCGATATCGGCGGCAGGGATCATGAAGGTGGTGGAGCAGG
GAGACGTATGTTGTATTCTACCGGGAGGAATCGCAGAAATGTTCATGCTG
GATCCATCAAACGAGACGGAGAAGGTCCTGATTCGACGGGGTTTCATACG
CGAAGCGTTGAAGAACCGTGTGGATATCATCCCGATGTATCACTTTAACC
ACACGCAGACGTTCAGCTACATCCTTCCTCCTTCGCTCAATGAACTGTTG
GCAACCGTGTGTCGGAAGAGTGGGTTGCCTGGCTGCTTTTTGATCGGACG
ATGGGGATTATTTGTCCCTCATAAGGTCAAGATGTTCTCGGTTGTGGGGA
GGCCGATTCAGGCTCAAGCCTATGACGGCTGCAGCCCAGGACCTAAATCA
TAAGATCACACACTCCGTGCAAACTCAACGGTGAATCGCATGAAGAAGCA
CAACTGCATCGCAACAACGCCACTGAATCACATGCAATCAAAATATGCTT
TTTCTCTCTTGTTTTTATTCTTCTTCTTGCATTCACGCACAGTGCGTATG
TACAGTTTCCTCCTCCTGCTCCTGCTTCTCCCTATTGTCCACCGGCTACT
GTGGCCCCCTCGTTCCCGCCCCGTGTACGGCCGCCATTGCTCTCTCTATC
TTTCCTTCCTTCAACTTCTCCCCGCTCTCCCCCGCCCCTTCCGCCTTTCC
CTCCTCCCTCTCCTTCATTTTCATGACTTTGACCATCTCAAACAACGTCC
CGACCTCCGCCAAGCCGTCTGCACACGACACTGTGGCCGCCATCGCCACC
AATGCTCTGAAACCCCACGTCCTTATACTACTCCCCTCGTCGAAGTCCAG
GATCGCTCGCACAATCGCCTCACACCCCCCAGCCTCCGCAACATGCAGCT
GATTCATTTTATTCCCTGCCACCAAGTGCGTCAGTGCATAGCACCCGGCA
AATTGGACGCGAGCGTTCTGGGAATGCTGACCCAAGGTCGCGACTACCTG
CTTGCATCCCCCCGTCAATCGTATCCTAACCTGATTCTCCTCGTTTCCAC
TCGCGAGATCTCCCAAGGCACGACATGCCCACTCGACCACATTCGGGTCT
ACCGCACAGGGCCCCGACATCCCCTTTAGGATGTGACGGCACGCCCCCGC
ATTTCCCAACTTGATCCGTGCACGCACGTCGCTACTTGCCAGATTCACAA
TCGCATAGCAAGCCGCAAATTGCACTGTGGGCACATTGGGAAAGGAAGCT
AAAGTCTGCACCAACGTACTACAACCCCCCGCGTCCATGACCGCCATTTG
GTTCTGATTACAATCCTTCATCAAGTCAGCATAAGCCCGTGCGCCCCATT
CTTGGATTTTCGGGTCATAAGGAAACTTATCAAGGGCACGAGAGACGGCC
TGCGCGGCGTTGCCTGCACAGAACAATAATTGGTTTTCAAGGCATTCCCC
TGCTAAATTCGCCAGGGCGTAACAACATGCAAATTGCACCCCACTGCACT
CAGGACAGTGTATCATTGCATTCAAAACTGCCGGGCAACCACTTACCCCC
TGCTCCACCCTCAACCGCTGCGCGACTAGCACACTCCTATCCCCTGCCCC
TACCAGCCCTCCCAGC back to topprotein sequence of jgi.p|Nanoce1779_2|627607 >mRNA_76-protein ID=mRNA_76-protein|Name=jgi.p|Nanoce1779_2|627607|organism=Nannochloropsis oceanica|type=polypeptide|length=380bp
MSSFLRWPRRSRTPKRTAAAPPTAAGTTATILCDGLRLDSSSSSINASSS
SDSNVDSKTESMGSSTDESPPTSPQTTSKALTLTLGDVCPGTRLTLPWWE
EALLLPCFVVLCAPIFSFMMLGLSFVPFFGWVRASTSYLSAFSFYWVLLY
FDLVPRRERLSPPCLSTWFLRAMVRYFNYFVIVEDPSSIQPSTPYIGVQS
PHGIYPIASVCAAPFSPSLFRGRDSYCMAASALQLQPFLWQWLETLGGRP
ISAAGIMKVVEQGDVCCILPGGIAEMFMLDPSNETEKVLIRRGFIREALK
NRVDIIPMYHFNHTQTFSYILPPSLNELLATVCRKSGLPGCFLIGRWGLF
VPHKVKMFSVVGRPIQAQAYDGCSPGPKS* back to topmRNA from alignment at scaffold_3:203155..206532- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_76 ID=mRNA_76|Name=jgi.p|Nanoce1779_2|627607|organism=Nannochloropsis oceanica|type=mRNA|length=3378bp|location=Sequence derived from alignment at scaffold_3:203155..206532- (Nannochloropsis oceanica)
GGACAATTTCTGCGGTTTCTTCTCTCAACCACCCACACAATAGTACGAAA
GTACAGGGAAATTGTCTACTGTCCCATGTTATTCCTGCCTCGCCATCGGC
GATGAGCAGGCGATGTGGAGTGCGTGGCTGGTCTCGTCATGCCTCCTTTC
TTCGTTCCTCAGCTCATTTGAACACCCGTTCCCCCTACACCTAACACAGC
AAGCGCGTCGCGCCTTTTTGTGTTGCCGCTGCACTCTATACGCACATTCT
CTTTAAATATACGATGTCCTCCTTCTTGCGTTGGCCTCGTCGCTCCAGGA
CTCCTAAACGTACTGCCGCTGCACCTCCCACCGCAGCAGGCACCACGGCC
ACCATCCTGTGCGATGGCCTGCGCCTTGACAGCAGCAGCAGTAGCATCAA
CGCCAGCAGTAGCAGTGACAGCAACGTCGACAGCAAGACCGAATCGATGG
GGAGCAGCACCGACGAGAGCCCCCCGACTTCCCCCCAGACCACCTCCAAA
GCTCTCACGCTCACCCTTGGCGACGTCTGCCCCGGCACTCGCCTAACCTT
GCCTTGGTGGGAAGAAGCACTGCTCCTCCCCTGCTTCGTTGTGCTGTGTG
CCCCCATCTTTTCATTTATGATGCTTGGCCTATCGTTTGTGCCATTTTTC
GGGTGGGTGAGGGCCAGCACTAGCTACCTCTCCGCATTCTCCTTCTACTG
GGTCCTGCTATACTTCGACCTCGTCCCTCGCCGGGAACGCCTTAGTCCTC
CCTGCCTCTCTACCTGGTTCCTGCGGGCCATGGTGCGGTACTTCAACTAT
TTTGTCATTGTCGAAGATCCTTCCTCCATCCAGCCCTCCACTCCCTACAT
CGGTGTGCAGAGCCCGCACGGCATTTATCCCATTGCAAGCGTCTGTGCCG
CTCCCTTCAGCCCCAGTCTCTTCCGAGGCCGCGATTCATATTGTATGGCG
GCGTCGGCGTTGCAGTTGCAGCCTTTTTTGTGGCAATGGCTGGAGACACT
GGGGGGGCGACCGATATCGGCGGCAGGGATCATGAAGGTGGTGGAGCAGG
GAGACGTATGTTGTATTCTACCGGGAGGAATCGCAGAAATGTTCATGCTG
GATCCATCAAACGAGACGGAGAAGGTCCTGATTCGACGGGGTTTCATACG
CGAAGCGTTGAAGAACCGTGTGGATATCATCCCGATGTATCACTTTAACC
ACACGCAGACGTTCAGCTACATCCTTCCTCCTTCGCTCAATGAACTGTTG
GCAACCGTGTGTCGGAAGAGTGGGTTGCCTGGCTGCTTTTTGATCGGACG
ATGGGGATTATTTGTCCCTCATAAGGTCAAGATGTTCTCGGTTGTGGGGA
GGCCGATTCAGGTGCGGCGACGCCACTGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCTGCAAAAACAACAGTGGGAATGGGAAGATTCCGGGGACGGAGGA
TGGAAGGGCGAAGAAGGTAGGCATGGAGGGAGAGAAGTATGAGCCAACGG
AGGAGGAGATTGAGGCAGTGGTTGTGGAGTACAAGGAGGCACTACGCCGC
ATTTATTACACTTTTCGACCGGCGGATGGACAGCGGGAGCTGGTGCTGGT
GGATAACCAGAAGGGGAATAGCGCTAGCAGCAGCAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCGGTAAGAATAATAGC
CATTAGGAGCACCCAGTAGAAGCTTAGGTCGGTTTGTGATTATTTTTACT
GGAATAGAAGGAGTAGTAGCAGCAGCAGCAGCAGCAGCTGCAGAAAAAGA
GGGGGGAAAGCGACGACTGTATCTGCCAGTAGGGCAAGAGAAAATTGAAA
AATAATGAAAAAAGGAAACAGGAATTGAAAATGGGAATCATGGGGTAGGA
AGAAAGAGAAATGGTTGAAGTAGGAGATTCGCGTGTGTGTATAAAGTGAT
TGTTTTTTAGTGCTTTGCGGGAAGAAAGCAGGAAAATTGGCAAGGGAAAG
GCAAAAGAAAGAACAATATACCATTATGAAGAATACCTTGCGATTATTTA
GTTCTCTTTGTATTTCATTTGATTGTGCTATCGTCTGTAACGGTGGTCCT
CTGGTCTATCTATTATTGCCTAGGCTCAAGCCTATGACGGCTGCAGCCCA
GGACCTAAATCATAAGATCACACACTCCGTGCAAACTCAACGGTGAATCG
CATGAAGAAGCACAACTGCATCGCAACAACGCCACTGAATCACATGCAAT
CAAAATATGCTTTTTCTCTCTTGTTTTTATTCTTCTTCTTGCATTCACGC
ACAGTGCGTATGTACAGTTTCCTCCTCCTGCTCCTGCTTCTCCCTATTGT
CCACCGGCTACTGTGGCCCCCTCGTTCCCGCCCCGTGTACGGCCGCCATT
GCTCTCTCTATCTTTCCTTCCTTCAACTTCTCCCCGCTCTCCCCCGCCCC
TTCCGCCTTTCCCTCCTCCCTCTCCTTCATTTTCATGACTTTGACCATCT
CAAACAACGTCCCGACCTCCGCCAAGCCGTCTGCACACGACACTGTGGCC
GCCATCGCCACCAATGCTCTGAAACCCCACGTCCTTATACTACTCCCCTC
GTCGAAGTCCAGGATCGCTCGCACAATCGCCTCACACCCCCCAGCCTCCG
CAACATGCAGCTGATTCATTTTATTCCCTGCCACCAAGTGCGTCAGTGCA
TAGCACCCGGCAAATTGGACGCGAGCGTTCTGGGAATGCTGACCCAAGGT
CGCGACTACCTGCTTGCATCCCCCCGTCAATCGTATCCTAACCTGATTCT
CCTCGTTTCCACTCGCGAGATCTCCCAAGGCACGACATGCCCACTCGACC
ACATTCGGGTCTACCGCACAGGGCCCCGACATCCCCTTTAGGATGTGACG
GCACGCCCCCGCATTTCCCAACTTGATCCGTGCACGCACGTCGCTACTTG
CCAGATTCACAATCGCATAGCAAGCCGCAAATTGCACTGTGGGCACATTG
GGAAAGGAAGCTAAAGTCTGCACCAACGTACTACAACCCCCCGCGTCCAT
GACCGCCATTTGGTTCTGATTACAATCCTTCATCAAGTCAGCATAAGCCC
GTGCGCCCCATTCTTGGATTTTCGGGTCATAAGGAAACTTATCAAGGGCA
CGAGAGACGGCCTGCGCGGCGTTGCCTGCACAGAACAATAATTGGTTTTC
AAGGCATTCCCCTGCTAAATTCGCCAGGGCGTAACAACATGCAAATTGCA
CCCCACTGCACTCAGGACAGTGTATCATTGCATTCAAAACTGCCGGGCAA
CCACTTACCCCCTGCTCCACCCTCAACCGCTGCGCGACTAGCACACTCCT
ATCCCCTGCCCCTACCAGCCCTCCCAGC back to topCoding sequence (CDS) from alignment at scaffold_3:203155..206532- >mRNA_76 ID=mRNA_76|Name=jgi.p|Nanoce1779_2|627607|organism=Nannochloropsis oceanica|type=CDS|length=2280bp|location=Sequence derived from alignment at scaffold_3:203155..206532- (Nannochloropsis oceanica)
GCTCAAGCCTATGACGGCTGCAGCCCAGGACCTAAATCATAAATGTCCTC
CTTCTTGCGTTGGCCTCGTCGCTCCAGGACTCCTAAACGTACTGCCGCTG
CACCTCCCACCGCAGCAGGCACCACGGCCACCATCCTGTGCGATGGCCTG
CGCCTTGACAGCAGCAGCAGTAGCATCAACGCCAGCAGTAGCAGTGACAG
CAACGTCGACAGCAAGACCGAATCGATGGGGAGCAGCACCGACGAGAGCC
CCCCGACTTCCCCCCAGACCACCTCCAAAGCTCTCACGCTCACCCTTGGC
GACGTCTGCCCCGGCACTCGCCTAACCTTGCCTTGGTGGGAAGAAGCACT
GCTCCTCCCCTGCTTCGTTGTGCTGTGTGCCCCCATCTTTTCATTTATGA
TGCTTGGCCTATCGTTTGTGCCATTTTTCGGGTGGGTGAGGGCCAGCACT
AGCTACCTCTCCGCATTCTCCTTCTACTGGGTCCTGCTATACTTCGACCT
CGTCCCTCGCCGGGAACGCCTTAGTCCTCCCTGCCTCTCTACCTGGTTCC
TGCGGGCCATGGTGCGGTACTTCAACTATTTTGTCATTGTCGAAGATCCT
TCCTCCATCCAGCCCTCCACTCCCTACATCGGTGTGCAGAGCCCGCACGG
CATTTATCCCATTGCAAGCGTCTGTGCCGCTCCCTTCAGCCCCAGTCTCT
TCCGAGGCCGCGATTCATATTGTATGGCGGCGTCGGCGTTGCAGTTGCAG
CCTTTTTTGTGGCAATGGCTGGAGACACTGGGGGGGCGACCGATATCGGC
GGCAGGGATCATGAAGGTGGTGGAGCAGGGAGACGTATGTTGTATTCTAC
CGGGAGGAATCGCAGAAATGTTCATGCTGGATCCATCAAACGAGACGGAG
AAGGTCCTGATTCGACGGGGTTTCATACGCGAAGCGTTGAAGAACCGTGT
GGATATCATCCCGATGTATCACTTTAACCACACGCAGACGTTCAGCTACA
TCCTTCCTCCTTCGCTCAATGAACTGTTGGCAACCGTGTGTCGGAAGAGT
GGGTTGCCTGGCTGCTTTTTGATCGGACGATGGGGATTATTTGTCCCTCA
TAAGGTCAAGATGTTCTCGGTTGTGGGGAGGCCGATTCAGGCTCAAGCCT
ATGACGGCTGCAGCCCAGGACCTAAATCATAAATGTCCTCCTTCTTGCGT
TGGCCTCGTCGCTCCAGGACTCCTAAACGTACTGCCGCTGCACCTCCCAC
CGCAGCAGGCACCACGGCCACCATCCTGTGCGATGGCCTGCGCCTTGACA
GCAGCAGCAGTAGCATCAACGCCAGCAGTAGCAGTGACAGCAACGTCGAC
AGCAAGACCGAATCGATGGGGAGCAGCACCGACGAGAGCCCCCCGACTTC
CCCCCAGACCACCTCCAAAGCTCTCACGCTCACCCTTGGCGACGTCTGCC
CCGGCACTCGCCTAACCTTGCCTTGGTGGGAAGAAGCACTGCTCCTCCCC
TGCTTCGTTGTGCTGTGTGCCCCCATCTTTTCATTTATGATGCTTGGCCT
ATCGTTTGTGCCATTTTTCGGGTGGGTGAGGGCCAGCACTAGCTACCTCT
CCGCATTCTCCTTCTACTGGGTCCTGCTATACTTCGACCTCGTCCCTCGC
CGGGAACGCCTTAGTCCTCCCTGCCTCTCTACCTGGTTCCTGCGGGCCAT
GGTGCGGTACTTCAACTATTTTGTCATTGTCGAAGATCCTTCCTCCATCC
AGCCCTCCACTCCCTACATCGGTGTGCAGAGCCCGCACGGCATTTATCCC
ATTGCAAGCGTCTGTGCCGCTCCCTTCAGCCCCAGTCTCTTCCGAGGCCG
CGATTCATATTGTATGGCGGCGTCGGCGTTGCAGTTGCAGCCTTTTTTGT
GGCAATGGCTGGAGACACTGGGGGGGCGACCGATATCGGCGGCAGGGATC
ATGAAGGTGGTGGAGCAGGGAGACGTATGTTGTATTCTACCGGGAGGAAT
CGCAGAAATGTTCATGCTGGATCCATCAAACGAGACGGAGAAGGTCCTGA
TTCGACGGGGTTTCATACGCGAAGCGTTGAAGAACCGTGTGGATATCATC
CCGATGTATCACTTTAACCACACGCAGACGTTCAGCTACATCCTTCCTCC
TTCGCTCAATGAACTGTTGGCAACCGTGTGTCGGAAGAGTGGGTTGCCTG
GCTGCTTTTTGATCGGACGATGGGGATTATTTGTCCCTCATAAGGTCAAG
ATGTTCTCGGTTGTGGGGAGGCCGATTCAG back to top
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