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Properties
| Property Name | Value |
| TranscriptId | 599387 |
| Track | FilteredModels2 |
| ProteinId | 599301 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_20 | supercontig | scaffold_20:340570..344258 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7598 ID=mRNA_7598|Name=jgi.p|Nanoce1779_2|599301|organism=Nannochloropsis oceanica|type=mRNA|length=3689bp ATGGTTGCCGAATTATTCTGTGCTTTGAGAATTGTACATCAAAGAGTGAG GCGTTTGAGTTGGGAGGTCCTGCCACAGGACTGCGCATCCAGCTTTTTTT TTTAATTATCTAGTCAATTATTTGTCGTCTCGTCCTTAAACTATGCACGA CTATCAGTCGTCGTAGTCGTCCTCAGTGGAAATCATGCACGCCTACTAGT CGATGGGAATCATGCACAACTGTGACATATATCGTAATGATGAGTCAAGT CATGCACGCCATTTTCGCAGGACAGTCGTCCAACGAGAGATCTCTCTATC TCTCTATCTCCATGGATCCACAGGGCGCATATCTCGCTCGCTGCCACTGC GCTTATATCATCACTGTCTCTTTCTCCCTCTCCTTTATCTTTTTCTAAGT TCTTCTGGAGGACTTTCAAATTTCCGAGACGAGATGGCTCTCACAGACTG ACACCTCCTTCGCACCAATCAACTGCACCCATATGTTATAGCTAACATGC TCCACCAGCGGAAAGCGGCGATGGCAGCCGCCGCTGCCGGCGCGTGCCGC AGCATTCGCAGCGTCGCATCGACCTTGCCCTCCTCTTCGCTCTCGACACG CATCTATTTTATGGACCACCCGCCGCTCCACACCGCGCGCCCCGCGTCTA TGGCATCCTCTTCTTCGTCGTCTAATGCTTGGCTGCCAGCCGCGCTGGTG GCCGTGGCAACTGCTTCCGTCCTGACGTCGCTGACAGAGGCAGCGCCACC AACAGCGGCGGCGTCGGCACCGGACAGCAGCGACGACACCAAAGATAATT CAAAGGAAAATGTGTTGCCTATGCGAGAGGTCATGGCATTGATCGAAAGC CGGCTGAAGCCCTTTCGCACGGAGCGCTTCCTTTCTTCTCGACCTCGCAG AAGTAGCAGAAGCGGCAGCGGTACATTTCCTCCTACCGTCGGGGAGCACG ACCTCCCCACCGTTGCCAGCAAAACTTTCCCCAAAATCGCCGTGTTGAGC AAGGGCAAGGGCGTGGATGAGCCCTACACCATCGAAGTTCCCTTGCCGCC AACGGCCAGTAGGGAAACAAATGTGCTCGCAGCCTGCCTACATGCCTTGC AGAAGAAGGGGCACACGCTCACGTTCCACACGGGCTTGACCACAAACAAT GGAACCAGCCTTTCCTTCGTCTTCGGCGACCAGTCCGGATCCGTCCTTCT GACCTCTTCGTCGGCTGTCGCGGCGCCATCATCGTCGACTGAGGTGATGC CATCGACAGGGACAGGCAAATCAAGCCTCCTTCTGTACAAGACCAAGGGC TTTACAGAAGCGGACGTAGACGCGGTTGTTGATTCGTACATCATGGCTTG GAGGAGCAGCCCAGACGATCAGCTCACCGGCTCATTCCTCAGCAATTTTA CGGATGTCCTAGATGCGCTCCGTATTGGTGGCGGCGGTGGTGGCAAATAC GCATTTGATCACGAGCAGGACGTCCCTTACTCGTCCCCTCAGCGCCCCGT CCCACCACATTCCCCCTTTTCCCGGCCGTCCTCGACCCGCGGGGAAAGCA TAGTTGAGCGAGGCGGCGGTATCGGGAGCGGGCAGAATGGCACTGCTGTG ATGGGAGAAAACGACCCGGTGTCCAGGCTAAAGAAGCTTGGCGCGGAGGT GTTCGAAAAGGCGACGGAAGAGGAACTGGACTGGACTTGCCTAGCGGGAT ACGAGAGCATCAAGGCTGAGGTAGAGGATACAGTAGTCATGGCCTTGCAG CACGCCGAGGCCTACGATGCTATTGCCCGTCAGACCCGCGAGCGTTATGA GAGTAATCGCCCAAGGGCCGTTCTTTTTGAGGGCCCTCCAGGGACGGGCA AGACATTGACCGCTCGCATCATTGCTAGCCGTACGGAGGTGCCGTTGGTC TTCATTTCAACAGAGCGCGTCCTCAGTAAATGGTATGGCGATTCGGAGAA GAATTTGGCGAAGGTTTTCGAGGCATGCAAAGAACTGGGAGGGGCTATCA TCTTTATTGACGAAGTAGACGCGTTGGCTGCCAGCCGAGACACTAACATG CACGAGGCTACGAGGCGTCTCCTTAGCGTCATACTGCAGAGTATCGAGGG CTTTAGAGGCCGCAACAAAAACGTGCTCATATGCGCCACCAACCGCAAGC AAGACCTCGATTCGGCCTTACTTTCTCGATTTGACGTATCCATCAAGTTT GACCTGCCCACATGCCCTGCCCGTCAGGCGATCTTTGCCCGGTACGCAAA ACATTTGGCCGGGAATGAGCTAGCCCGTCTGGCGGAGGCTTCCGAAGCCT ACTCCTGCAGGGATATTAAGGAGGTGTGTGAAAATACGGAGCGGAAGTGG GCTTCCAAAACCATTCGTGGACAAGCGGACGGCCTCACACCGCCACTCAA GGAGTACCTCAATCAACTCAAAGCGCAGACCCTTTCCGATCATCAAACCC TGCCTCATAACGTTTAAAATACGAGATGGCAAGTGAAGGCAAAATTTTGG GATGGACAAATCAAGACATAGACAATGTGCATACTTAAAAAAAAAAACCC ACAAAATTATACACGAGGTCTGATTACTTCACTTCTCGTCTATGGCTGCT TGTGATGAGCTTTTTTGATGAGTGCATACTCCCCCTTCTAAAAAAACTCC TTCCCCCAAACTGAGATATCTAGTCGTAATACTTCGAGAGGGAGTAAGTG CTGCTCGGATAACGGTGCATTTGAATACGGCACGGATTCTTATAATGAAG TGAACGTCTTGATTCTTGAGGGCCTTCTCAAAGAGTCCGCCAAGTTGGGG CCACTGTAAATATAAAGAAAATCTCGCGTGATCATTTTCGCAGAGCTATC AGGCACATTTCCATGAAATTTCAAATCCGCATGACATTTTTGCACACGCC AGTCATAGACGACGAACACATGCTTCTTTTCACACCTGATTACCATTGAG CTAAAGAGCGACTCACATTTCCGCCTCAGTTTCTCGGATGACAGCTCTCT CACACTATACAAGAAGCAATACGGTGCGCCATAACGACGACATATAAGAC AATACGGTGCGCCATACGGAAGCAGGCAGCACTGGCCGATTCTTTAAATT AAGGACAAGATAAGGCTGAACTCATCACCTGGGATCTGAATGCTGAAAAA CCGATAAAAAGTGTCTTTTTGGTCGTATTCCGACTTACGTGGAAGTTAAA TTGAAAATTTAATCCTGGAACCATTGCCATTCTTCCAGAATTCGAGTGTT GCTAGTTTTCCGGTGTCTTATATGGAAAAAATCGTGTTGTCCTTATTTTT GATGATTCTGAAAGAAATTAAGTGCAGAGGTAAAAGAAAGAAGACGATGA GCAACAAGCGGACTTCATCCGTTTCCTGCTTCCTGCACTCACTCTTTCTT CCTTTTATGGTGAATAACTCACCATAAAAAGGTGAAATCCTTGGTTCATA GTAGACTGTAAGCGACTGTCTGACGAAATGGTAATAAACCACGCCCCGAT GCCTCAAATGCGCTTCGCCATGATAGTGAGTGTAGGGAAGAAGCACGGGC AACCCCATAGCAGTGCCATAAAGACCGCAGCATAGCAACAACAGCAGCAG CAAAAGCGGCTGCGGCACAAAGAGCAAGATATGATGATGATGATGATGAT GATGATGGTGATGATGAGGAGGAGGAGGAGGAGAAGGAG back to topprotein sequence of jgi.p|Nanoce1779_2|599301 >mRNA_7598-protein ID=mRNA_7598-protein|Name=jgi.p|Nanoce1779_2|599301|organism=Nannochloropsis oceanica|type=polypeptide|length=657bp MLHQRKAAMAAAAAGACRSIRSVASTLPSSSLSTRIYFMDHPPLHTARPA SMASSSSSSNAWLPAALVAVATASVLTSLTEAAPPTAAASAPDSSDDTKD NSKENVLPMREVMALIESRLKPFRTERFLSSRPRRSSRSGSGTFPPTVGE HDLPTVASKTFPKIAVLSKGKGVDEPYTIEVPLPPTASRETNVLAACLHA LQKKGHTLTFHTGLTTNNGTSLSFVFGDQSGSVLLTSSSAVAAPSSSTEV MPSTGTGKSSLLLYKTKGFTEADVDAVVDSYIMAWRSSPDDQLTGSFLSN FTDVLDALRIGGGGGGKYAFDHEQDVPYSSPQRPVPPHSPFSRPSSTRGE SIVERGGGIGSGQNGTAVMGENDPVSRLKKLGAEVFEKATEEELDWTCLA GYESIKAEVEDTVVMALQHAEAYDAIARQTRERYESNRPRAVLFEGPPGT GKTLTARIIASRTEVPLVFISTERVLSKWYGDSEKNLAKVFEACKELGGA IIFIDEVDALAASRDTNMHEATRRLLSVILQSIEGFRGRNKNVLICATNR KQDLDSALLSRFDVSIKFDLPTCPARQAIFARYAKHLAGNELARLAEASE AYSCRDIKEVCENTERKWASKTIRGQADGLTPPLKEYLNQLKAQTLSDHQ TLPHNV* back to topmRNA from alignment at scaffold_20:340570..344258- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7598 ID=mRNA_7598|Name=jgi.p|Nanoce1779_2|599301|organism=Nannochloropsis oceanica|type=mRNA|length=3689bp|location=Sequence derived from alignment at scaffold_20:340570..344258- (Nannochloropsis oceanica) ATGGTTGCCGAATTATTCTGTGCTTTGAGAATTGTACATCAAAGAGTGAG
GCGTTTGAGTTGGGAGGTCCTGCCACAGGACTGCGCATCCAGCTTTTTTT
TTTAATTATCTAGTCAATTATTTGTCGTCTCGTCCTTAAACTATGCACGA
CTATCAGTCGTCGTAGTCGTCCTCAGTGGAAATCATGCACGCCTACTAGT
CGATGGGAATCATGCACAACTGTGACATATATCGTAATGATGAGTCAAGT
CATGCACGCCATTTTCGCAGGACAGTCGTCCAACGAGAGATCTCTCTATC
TCTCTATCTCCATGGATCCACAGGGCGCATATCTCGCTCGCTGCCACTGC
GCTTATATCATCACTGTCTCTTTCTCCCTCTCCTTTATCTTTTTCTAAGT
TCTTCTGGAGGACTTTCAAATTTCCGAGACGAGATGGCTCTCACAGACTG
ACACCTCCTTCGCACCAATCAACTGCACCCATATGTTATAGCTAACATGC
TCCACCAGCGGAAAGCGGCGATGGCAGCCGCCGCTGCCGGCGCGTGCCGC
AGCATTCGCAGCGTCGCATCGACCTTGCCCTCCTCTTCGCTCTCGACACG
CATCTATTTTATGGACCACCCGCCGCTCCACACCGCGCGCCCCGCGTCTA
TGGCATCCTCTTCTTCGTCGTCTAATGCTTGGCTGCCAGCCGCGCTGGTG
GCCGTGGCAACTGCTTCCGTCCTGACGTCGCTGACAGAGGCAGCGCCACC
AACAGCGGCGGCGTCGGCACCGGACAGCAGCGACGACACCAAAGATAATT
CAAAGGAAAATGTGTTGCCTATGCGAGAGGTCATGGCATTGATCGAAAGC
CGGCTGAAGCCCTTTCGCACGGAGCGCTTCCTTTCTTCTCGACCTCGCAG
AAGTAGCAGAAGCGGCAGCGGTACATTTCCTCCTACCGTCGGGGAGCACG
ACCTCCCCACCGTTGCCAGCAAAACTTTCCCCAAAATCGCCGTGTTGAGC
AAGGGCAAGGGCGTGGATGAGCCCTACACCATCGAAGTTCCCTTGCCGCC
AACGGCCAGTAGGGAAACAAATGTGCTCGCAGCCTGCCTACATGCCTTGC
AGAAGAAGGGGCACACGCTCACGTTCCACACGGGCTTGACCACAAACAAT
GGAACCAGCCTTTCCTTCGTCTTCGGCGACCAGTCCGGATCCGTCCTTCT
GACCTCTTCGTCGGCTGTCGCGGCGCCATCATCGTCGACTGAGGTGATGC
CATCGACAGGGACAGGCAAATCAAGCCTCCTTCTGTACAAGACCAAGGGC
TTTACAGAAGCGGACGTAGACGCGGTTGTTGATTCGTACATCATGGCTTG
GAGGAGCAGCCCAGACGATCAGCTCACCGGCTCATTCCTCAGCAATTTTA
CGGATGTCCTAGATGCGCTCCGTATTGGTGGCGGCGGTGGTGGCAAATAC
GCATTTGATCACGAGCAGGACGTCCCTTACTCGTCCCCTCAGCGCCCCGT
CCCACCACATTCCCCCTTTTCCCGGCCGTCCTCGACCCGCGGGGAAAGCA
TAGTTGAGCGAGGCGGCGGTATCGGGAGCGGGCAGAATGGCACTGCTGTG
ATGGGAGAAAACGACCCGGTGTCCAGGCTAAAGAAGCTTGGCGCGGAGGT
GTTCGAAAAGGCGACGGAAGAGGAACTGGACTGGACTTGCCTAGCGGGAT
ACGAGAGCATCAAGGCTGAGGTAGAGGATACAGTAGTCATGGCCTTGCAG
CACGCCGAGGCCTACGATGCTATTGCCCGTCAGACCCGCGAGCGTTATGA
GAGTAATCGCCCAAGGGCCGTTCTTTTTGAGGGCCCTCCAGGGACGGGCA
AGACATTGACCGCTCGCATCATTGCTAGCCGTACGGAGGTGCCGTTGGTC
TTCATTTCAACAGAGCGCGTCCTCAGTAAATGGTATGGCGATTCGGAGAA
GAATTTGGCGAAGGTTTTCGAGGCATGCAAAGAACTGGGAGGGGCTATCA
TCTTTATTGACGAAGTAGACGCGTTGGCTGCCAGCCGAGACACTAACATG
CACGAGGCTACGAGGCGTCTCCTTAGCGTCATACTGCAGAGTATCGAGGG
CTTTAGAGGCCGCAACAAAAACGTGCTCATATGCGCCACCAACCGCAAGC
AAGACCTCGATTCGGCCTTACTTTCTCGATTTGACGTATCCATCAAGTTT
GACCTGCCCACATGCCCTGCCCGTCAGGCGATCTTTGCCCGGTACGCAAA
ACATTTGGCCGGGAATGAGCTAGCCCGTCTGGCGGAGGCTTCCGAAGCCT
ACTCCTGCAGGGATATTAAGGAGGTGTGTGAAAATACGGAGCGGAAGTGG
GCTTCCAAAACCATTCGTGGACAAGCGGACGGCCTCACACCGCCACTCAA
GGAGTACCTCAATCAACTCAAAGCGCAGACCCTTTCCGATCATCAAACCC
TGCCTCATAACGTTTAAAATACGAGATGGCAAGTGAAGGCAAAATTTTGG
GATGGACAAATCAAGACATAGACAATGTGCATACTTAAAAAAAAAAACCC
ACAAAATTATACACGAGGTCTGATTACTTCACTTCTCGTCTATGGCTGCT
TGTGATGAGCTTTTTTGATGAGTGCATACTCCCCCTTCTAAAAAAACTCC
TTCCCCCAAACTGAGATATCTAGTCGTAATACTTCGAGAGGGAGTAAGTG
CTGCTCGGATAACGGTGCATTTGAATACGGCACGGATTCTTATAATGAAG
TGAACGTCTTGATTCTTGAGGGCCTTCTCAAAGAGTCCGCCAAGTTGGGG
CCACTGTAAATATAAAGAAAATCTCGCGTGATCATTTTCGCAGAGCTATC
AGGCACATTTCCATGAAATTTCAAATCCGCATGACATTTTTGCACACGCC
AGTCATAGACGACGAACACATGCTTCTTTTCACACCTGATTACCATTGAG
CTAAAGAGCGACTCACATTTCCGCCTCAGTTTCTCGGATGACAGCTCTCT
CACACTATACAAGAAGCAATACGGTGCGCCATAACGACGACATATAAGAC
AATACGGTGCGCCATACGGAAGCAGGCAGCACTGGCCGATTCTTTAAATT
AAGGACAAGATAAGGCTGAACTCATCACCTGGGATCTGAATGCTGAAAAA
CCGATAAAAAGTGTCTTTTTGGTCGTATTCCGACTTACGTGGAAGTTAAA
TTGAAAATTTAATCCTGGAACCATTGCCATTCTTCCAGAATTCGAGTGTT
GCTAGTTTTCCGGTGTCTTATATGGAAAAAATCGTGTTGTCCTTATTTTT
GATGATTCTGAAAGAAATTAAGTGCAGAGGTAAAAGAAAGAAGACGATGA
GCAACAAGCGGACTTCATCCGTTTCCTGCTTCCTGCACTCACTCTTTCTT
CCTTTTATGGTGAATAACTCACCATAAAAAGGTGAAATCCTTGGTTCATA
GTAGACTGTAAGCGACTGTCTGACGAAATGGTAATAAACCACGCCCCGAT
GCCTCAAATGCGCTTCGCCATGATAGTGAGTGTAGGGAAGAAGCACGGGC
AACCCCATAGCAGTGCCATAAAGACCGCAGCATAGCAACAACAGCAGCAG
CAAAAGCGGCTGCGGCACAAAGAGCAAGATATGATGATGATGATGATGAT
GATGATGGTGATGATGAGGAGGAGGAGGAGGAGAAGGAG back to topCoding sequence (CDS) from alignment at scaffold_20:340570..344258- >mRNA_7598 ID=mRNA_7598|Name=jgi.p|Nanoce1779_2|599301|organism=Nannochloropsis oceanica|type=CDS|length=1971bp|location=Sequence derived from alignment at scaffold_20:340570..344258- (Nannochloropsis oceanica) ATGCTCCACCAGCGGAAAGCGGCGATGGCAGCCGCCGCTGCCGGCGCGTG CCGCAGCATTCGCAGCGTCGCATCGACCTTGCCCTCCTCTTCGCTCTCGA CACGCATCTATTTTATGGACCACCCGCCGCTCCACACCGCGCGCCCCGCG TCTATGGCATCCTCTTCTTCGTCGTCTAATGCTTGGCTGCCAGCCGCGCT GGTGGCCGTGGCAACTGCTTCCGTCCTGACGTCGCTGACAGAGGCAGCGC CACCAACAGCGGCGGCGTCGGCACCGGACAGCAGCGACGACACCAAAGAT AATTCAAAGGAAAATGTGTTGCCTATGCGAGAGGTCATGGCATTGATCGA AAGCCGGCTGAAGCCCTTTCGCACGGAGCGCTTCCTTTCTTCTCGACCTC GCAGAAGTAGCAGAAGCGGCAGCGGTACATTTCCTCCTACCGTCGGGGAG CACGACCTCCCCACCGTTGCCAGCAAAACTTTCCCCAAAATCGCCGTGTT GAGCAAGGGCAAGGGCGTGGATGAGCCCTACACCATCGAAGTTCCCTTGC CGCCAACGGCCAGTAGGGAAACAAATGTGCTCGCAGCCTGCCTACATGCC TTGCAGAAGAAGGGGCACACGCTCACGTTCCACACGGGCTTGACCACAAA CAATGGAACCAGCCTTTCCTTCGTCTTCGGCGACCAGTCCGGATCCGTCC TTCTGACCTCTTCGTCGGCTGTCGCGGCGCCATCATCGTCGACTGAGGTG ATGCCATCGACAGGGACAGGCAAATCAAGCCTCCTTCTGTACAAGACCAA GGGCTTTACAGAAGCGGACGTAGACGCGGTTGTTGATTCGTACATCATGG CTTGGAGGAGCAGCCCAGACGATCAGCTCACCGGCTCATTCCTCAGCAAT TTTACGGATGTCCTAGATGCGCTCCGTATTGGTGGCGGCGGTGGTGGCAA ATACGCATTTGATCACGAGCAGGACGTCCCTTACTCGTCCCCTCAGCGCC CCGTCCCACCACATTCCCCCTTTTCCCGGCCGTCCTCGACCCGCGGGGAA AGCATAGTTGAGCGAGGCGGCGGTATCGGGAGCGGGCAGAATGGCACTGC TGTGATGGGAGAAAACGACCCGGTGTCCAGGCTAAAGAAGCTTGGCGCGG AGGTGTTCGAAAAGGCGACGGAAGAGGAACTGGACTGGACTTGCCTAGCG GGATACGAGAGCATCAAGGCTGAGGTAGAGGATACAGTAGTCATGGCCTT GCAGCACGCCGAGGCCTACGATGCTATTGCCCGTCAGACCCGCGAGCGTT ATGAGAGTAATCGCCCAAGGGCCGTTCTTTTTGAGGGCCCTCCAGGGACG GGCAAGACATTGACCGCTCGCATCATTGCTAGCCGTACGGAGGTGCCGTT GGTCTTCATTTCAACAGAGCGCGTCCTCAGTAAATGGTATGGCGATTCGG AGAAGAATTTGGCGAAGGTTTTCGAGGCATGCAAAGAACTGGGAGGGGCT ATCATCTTTATTGACGAAGTAGACGCGTTGGCTGCCAGCCGAGACACTAA CATGCACGAGGCTACGAGGCGTCTCCTTAGCGTCATACTGCAGAGTATCG AGGGCTTTAGAGGCCGCAACAAAAACGTGCTCATATGCGCCACCAACCGC AAGCAAGACCTCGATTCGGCCTTACTTTCTCGATTTGACGTATCCATCAA GTTTGACCTGCCCACATGCCCTGCCCGTCAGGCGATCTTTGCCCGGTACG CAAAACATTTGGCCGGGAATGAGCTAGCCCGTCTGGCGGAGGCTTCCGAA GCCTACTCCTGCAGGGATATTAAGGAGGTGTGTGAAAATACGGAGCGGAA GTGGGCTTCCAAAACCATTCGTGGACAAGCGGACGGCCTCACACCGCCAC TCAAGGAGTACCTCAATCAACTCAAAGCGCAGACCCTTTCCGATCATCAA ACCCTGCCTCATAACGTTTAA back to top
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