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Properties
| Property Name | Value |
|---|
| TranscriptId | 599346 |
| Track | FilteredModels2 |
| ProteinId | 599260 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_20 | supercontig | scaffold_20:311942..313683 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7586 ID=mRNA_7586|Name=jgi.p|Nanoce1779_2|599260|organism=Nannochloropsis oceanica|type=mRNA|length=1257bp
GGAGTTGACATCCTATTGCCGTCCGTGCATATGTCTTTGCGTGCTGTACA
AAGAATATTGTGAACTCATGCGGACACATAGCATACACTGGTTTCGATAA
ATGAATCAGTGTTGCGTATCATAGAAATCCGAAGAACAAGGCGGCAGCCT
CAACTCTGGCCCATTCCCCCGTTAGATGCAGTCACGTGCTTTGTTTACCC
TGAAGAAATCTGTGTGCCGGGAATAATGAAGGCTGGAAAGGGAATGGGAA
TGGATGGAGATACAGACTGGAAGGAGGAGAATGAGGGCGGGAGTGAGGAG
GAGTGGAGTAACCTCCTCACAGCACCACTCCTTTCAATCTCCTCCTCAAC
CTATCTCACATCCGAAGCAGCAGGTGAAGGACGGCGACTTGACGGCCGGC
GTAGGCACGGCACTTGAAGGTCACTCCCAATCTCCCAAATCCCTGATAAA
AATGAAGGAGACCATCCACTACGCGACTCTCTGGGCCCTGCCGGCTATCG
TGGCAAGCTTGCTCCTGCTAAACTTTATGGACATGGCATTGATGGGAGTG
CATAGCCTGGCCGTCCATACTCGCTCGTTACCAGGTCACGACCTCGCGGT
GCGGCTCAATAATCTACTGGAAAAGCTTTTGGGCGGTAAACAAATCCCGT
TCACCATAACAAGTGTTATTCTAGGCGCGGTCCTTGTGGCCATGATTTCG
TGCAGCATCAGCCTTAATCGATTGGTCATTCTCAAATCGGAGGAGGTGGA
GTTGTTGCGCGAAGAGGGGCTGAAGCGTAAGTGAGGAGGAGGAAAGAGGC
CTGGGAGAGCGGGACAAGAACACACGGGCGGTTCGTTACAAGACAGAAGG
AAGAGAAGAGATATGAGAGGGAAGAACGGTCCGACGCGTGGACAAGAAAA
CGATTAGACAGTAAATACGAATGAGACACCGCCAGACATCCTGTCATAAC
GCAGCACACACAAGGAAGAAGAAGAAGCGCCAGCAAGCAAAGCATGCCGT
TGCCTTCCTTTACTTTTCCATTCTTCTCAACGTTCTGACCATTTATTTGA
AGTGCCGCATCATCTTCCGAAGAATCGTCCTATTGTCTTCATTAGGCGGT
AAGTTAGGCTCTTCACTCTCCCTCCCACCTCCCTTGCCTCTTTCTCCCCC
CTTCTCCCTACCCCCATTCCTTCGACTGCTCCTCCGCGGTGGCGACCGTA
CCCGAGGACTCGCAGCAGAAGTAGCAGCAGCAGCTGCAGCAGCTGCAGCA
GCGCCGC back to topprotein sequence of jgi.p|Nanoce1779_2|599260 >mRNA_7586-protein ID=mRNA_7586-protein|Name=jgi.p|Nanoce1779_2|599260|organism=Nannochloropsis oceanica|type=polypeptide|length=175bp
MEIQTGRRRMRAGVRRSGVTSSQHHSFQSPPQPISHPKQQVKDGDLTAGV
GTALEGHSQSPKSLIKMKETIHYATLWALPAIVASLLLLNFMDMALMGVH
SLAVHTRSLPGHDLAVRLNNLLEKLLGGKQIPFTITSVILGAVLVAMISC
SISLNRLVILKSEEVELLREEGLKR back to topmRNA from alignment at scaffold_20:311942..313683- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7586 ID=mRNA_7586|Name=jgi.p|Nanoce1779_2|599260|organism=Nannochloropsis oceanica|type=mRNA|length=1742bp|location=Sequence derived from alignment at scaffold_20:311942..313683- (Nannochloropsis oceanica)
GGAGTTGACATCCTATTGCCGTCCGTGCATATGTCTTTGCGTGCTGTACA
AAGAATATTGTGAACTCATGCGGACACATAGCATACACTGGTTTCGATAA
ATGAATCAGTGTTGCGTATCATAGAAATCCGAAGAACAAGGCGGCAGCCT
CAACTCTGGCCCATTCCCCCGTTAGATGCAGTCACGTGCTTTGTTTACCC
TGAAGAAATCTGTGTGCCGGGAATAATGAAGGCTGGAAAGGGAATGGGAA
TGGATGGAGATACAGACTGGAAGGAGGAGAATGAGGGCGGGAGTGAGGAG
GAGTGGAGTAACCTCCTCACAGCACCACTCCTTTCAATCTCCTCCTCAAC
CTATCTCACATCCGAAGCAGCAGGTGAAGGACGGCGACTTGACGGCCGGC
GTAGGCACGGCACTTGAAGGTAAGAAAGGGATGGAGGTAGGTGGGGAGGG
AGGGCGGGCTCATGCAACAGCCTCAGCCTCTTAATTTTAGTCCTTCCAGC
CCGCCGCTCATTGGAAACAGCATGATCTCCTGTTGTAGTGCAGCACGCTG
CTTGTCCTCAGAAGAGGGATTTGCCTTTCAGGCTAATGGCCAGCATCCAC
CTTGTGTTTTCCTCGAGGAGGTGCCTTCCCTCCTTCCCTCCTTCCTTTCC
CATTCCCTCTCCCTTCTTCCAGGCGCTACTGCCCTTATCGACCCAGGCCA
TAAATGGAGAGAGGGGGAGGGGAAAGCGTCTAATTATCCTCCTTCCTTCC
GACGACCTGCTTATCTCTCCGTCTTTCTCACCATCACCCACTCTCCTTCC
CTCCCTCCAGGCGCCACGGCCCTCATCGACCAAGGCTATCCTCACCCTGT
CATGGCATTCTCTCATCTTTCTCTCTCCGTCACTGCTCACCCGATACACT
ACAGGTCACTCCCAATCTCCCAAATCCCTGATAAAAATGAAGGAGACCAT
CCACTACGCGACTCTCTGGGCCCTGCCGGCTATCGTGGCAAGCTTGCTCC
TGCTAAACTTTATGGACATGGCATTGATGGGAGTGCATAGCCTGGCCGTC
CATACTCGCTCGTTACCAGGTCACGACCTCGCGGTGCGGCTCAATAATCT
ACTGGAAAAGCTTTTGGGCGGTAAACAAATCCCGTTCACCATAACAAGTG
TTATTCTAGGCGCGGTCCTTGTGGCCATGATTTCGTGCAGCATCAGCCTT
AATCGATTGGTCATTCTCAAATCGGAGGAGGTGGAGTTGTTGCGCGAAGA
GGGGCTGAAGCGTAAGTGAGGAGGAGGAAAGAGGCCTGGGAGAGCGGGAC
AAGAACACACGGGCGGTTCGTTACAAGACAGAAGGAAGAGAAGAGATATG
AGAGGGAAGAACGGTCCGACGCGTGGACAAGAAAACGATTAGACAGTAAA
TACGAATGAGACACCGCCAGACATCCTGTCATAACGCAGCACACACAAGG
AAGAAGAAGAAGCGCCAGCAAGCAAAGCATGCCGTTGCCTTCCTTTACTT
TTCCATTCTTCTCAACGTTCTGACCATTTATTTGAAGTGCCGCATCATCT
TCCGAAGAATCGTCCTATTGTCTTCATTAGGCGGTAAGTTAGGCTCTTCA
CTCTCCCTCCCACCTCCCTTGCCTCTTTCTCCCCCCTTCTCCCTACCCCC
ATTCCTTCGACTGCTCCTCCGCGGTGGCGACCGTACCCGAGGACTCGCAG
CAGAAGTAGCAGCAGCAGCTGCAGCAGCTGCAGCAGCGCCGC back to topCoding sequence (CDS) from alignment at scaffold_20:311942..313683- >mRNA_7586 ID=mRNA_7586|Name=jgi.p|Nanoce1779_2|599260|organism=Nannochloropsis oceanica|type=CDS|length=1054bp|location=Sequence derived from alignment at scaffold_20:311942..313683- (Nannochloropsis oceanica)
GTCACTCCCAATCTCCCAAATCCCTGATAAAAATGAAGGAGACCATCCAC
TACGCGACTCTCTGGGCCCTGCCGGCTATCGTGGCAAGCTTGCTCCTGCT
AAACTTTATGGACATGGCATTGATGGGAGTGCATAGCCTGGCCGTCCATA
CTCGCTCGTTACCAGGTCACGACCTCGCGGTGCGGCTCAATAATCTACTG
GAAAAGCTTTTGGGCGGTAAACAAATCCCGTTCACCATAACAAGTGTTAT
TCTAGGCGCGGTCCTTGTGGCCATGATTTCGTGCAGCATCAGCCTTAATC
GATTGGTCATTCTCAAATCGGAGGAGGTGGAGTTGTTGCGCGAAGAGGGG
CTGAAGCGTAAATGGAGATACAGACTGGAAGGAGGAGAATGAGGGCGGGA
GTGAGGAGGAGTGGAGTAACCTCCTCACAGCACCACTCCTTTCAATCTCC
TCCTCAACCTATCTCACATCCGAAGCAGCAGGTGAAGGACGGCGACTTGA
CGGCCGGCGTAGGCACGGCACTTGAAGGTCACTCCCAATCTCCCAAATCC
CTGATAAAAATGAAGGAGACCATCCACTACGCGACTCTCTGGGCCCTGCC
GGCTATCGTGGCAAGCTTGCTCCTGCTAAACTTTATGGACATGGCATTGA
TGGGAGTGCATAGCCTGGCCGTCCATACTCGCTCGTTACCAGGTCACGAC
CTCGCGGTGCGGCTCAATAATCTACTGGAAAAGCTTTTGGGCGGTAAACA
AATCCCGTTCACCATAACAAGTGTTATTCTAGGCGCGGTCCTTGTGGCCA
TGATTTCGTGCAGCATCAGCCTTAATCGATTGGTCATTCTCAAATCGGAG
GAGGTGGAGTTGTTGCGCGAAGAGGGGCTGAAGCGTAAATGGAGATACAG
ACTGGAAGGAGGAGAATGAGGGCGGGAGTGAGGAGGAGTGGAGTAACCTC
CTCACAGCACCACTCCTTTCAATCTCCTCCTCAACCTATCTCACATCCGA
AGCAGCAGGTGAAGGACGGCGACTTGACGGCCGGCGTAGGCACGGCACTT
GAAG back to top
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