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Properties
| Property Name | Value |
|---|
| TranscriptId | 599343 |
| Track | FilteredModels2 |
| ProteinId | 599257 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_20 | supercontig | scaffold_20:309853..311750 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7584 ID=mRNA_7584|Name=jgi.p|Nanoce1779_2|599257|organism=Nannochloropsis oceanica|type=mRNA|length=1898bp
CGCTCCCGCTTACTGCTGTCATTCCCTCCTCCACGTAGGTTACTCGGGAG
AGGAGAGGAGGAGGAGGGGGAGGAGGAGGACTGGAGGAAGAAGGGAGAGG
GGAGTACTTCCACCTTGGTGGGTGGGGGTAGGACCAAGGGGGAGGCCGAG
TCACCACCACCACCGGCAGCAGCAGGAGGAGGAGCAGGAGGACCCTGTAG
CTGTCGGGTAAGCTCAGCGTGCTTTTCTACTTCTTCCGTTAGTGCTTGCC
TCCTTTGATGGAAGTGATAGAGCTGCATGTTGGCTGTGACGACCCTCAGG
ACCTGCTGCTGCGTGGCTACTGCTGCTCGATCCCTCGTTACCTTCACCTC
GGGTAGCCCAGCCCCTCCTTCTCCTTCCCCCAACACGGCCTGTTGGGCTT
CAAGGAGCTGCCATAGTTCGATTGAAAGTTGTGCACCTACTTGGCGTCGC
TCTCTTTCGCAGGCGAGGGCTAGTGCGTGTCGCTCTTGCTCGAGCTGCTT
GTGGAAAGAGGGAGGGATCGAGGGGAGGGAGGAAAGCTGTTGTTGGGCTT
GCGCGTGGCGGAGGGCGAGGCGTTGAGCGGCTTCGGCGTGTTTGTCGTCC
AAATGGGTCACGATAGTGGAGGCGAGTTGCTGCTTCATGGCTTGGATGAG
CCATTGGCCTTCTATGATGTCCAGGATGGTGGGGTCGGCCAGCAGGGCCT
TAACTGACTCGAGGGTGGAGTCGCTGAGGCCTGTCCCATAGGCGTCTTCC
ATATTGAGAAGGGCTTCAGTGGTGAAGAGCAAAGGGGGTGGCTCAAGGTC
TGTTGATTGGGGTGGTGGTAGCTGGGAGGGCGGAGGAAGGAGTGTGGCGG
TTGCTGCTGTTGGTCCTGCTGTTGATGATGCTGTTGCTATCCTTGCTGTT
TCTGGCATTATCGCTGCTGCTGCGATTCCTGCTTTTGTTTCTGTTGAAAC
CTCGTTCATCGTGTCGATCTGTGACTGATGAATGTCTGGTGCAGGAAGGT
GAAAGTCAGCAGCCTCAGCCCCCGCCACAGCAGCTAGGACGCGCGCGACG
GCATCGTCTACTGGAGCTACTGCTGTCTCTGCTTCTTCCTCTGCCGTTGG
TGTTGCCGGCTGTAATTCATCTACCTCCATCATTGTGGATGACTCTGCTG
CCGCCTCGTCAACCTTACCGTCCTGCTGTCCCTCCTTTTGCTTGTGCACT
TCTTTCTTTCCTTCCTCCTCCTCTTCCTCAGGCACATTAAGCATAGCCTT
GAGATGCGCCACCGTCTCAATCCCCTCCGTCCCCCCCCCCTCCTTTCGCC
TTGAGCGCCTCCAAGAACTCGGCCCAAATCACATCCCGCTCAGACTTGCT
CACCAGTACCTCCACCGCCCTCAAGTAGACTTTTTGCGCGTTGGCGAACT
TGCCTCGTTCCCGACAAAAGCGTCCGTACTCCACCCACAACTTGGGGGCC
TTCTCTCCAATCACATCAGTAGTGGCGCTTTCGAATACCTTGACTGCCTG
CTTCCACTGCCGCAAGCGCCGCTCAAACGCCGCATAAGCAAGCCACAGGT
CCACCAGCCCCTCTTCGTAGGGGCGACGACTCTCGGCGGACAAGGGGGGG
CTTGCTTCATCCAATAGACGGGAGTACTCGTCCGCCCACGCCGACAATGT
CTCCTCCCACAGCTTGCGGGCATCCTCCACACCGGTTGAGGCCAGCACAC
CCTCCACCTGTGCCTCGACACCTGGCAGGTCAAAGGCGGCAGAGGTGCTC
ATTGCTTGCTTAGATGAAATGAGGGGGCGTTAATGGACGTTGACGGAAAA
GGAGGTCGAGGTGCCGTACTGGTTGGTGTGTGGATGCCTTGTGCTGCACC
AAGCGACCGCTGGGAAATAATGCCAGCGTGCTGCACCTGCGGTGCTGT back to topprotein sequence of jgi.p|Nanoce1779_2|599257 >mRNA_7584-protein ID=mRNA_7584-protein|Name=jgi.p|Nanoce1779_2|599257|organism=Nannochloropsis oceanica|type=polypeptide|length=122bp
MMLLLSLLFLALSLLLRFLLLFLLKPRSSCRSVTDECLVQEGESQQPQPP
PQQLGRARRHRLLELLLSLLLPLPLVLPAVIHLPPSLWMTLLPPRQPYRP
AVPPFACALLSFLPPPLPQAH* back to topmRNA from alignment at scaffold_20:309853..311750- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7584 ID=mRNA_7584|Name=jgi.p|Nanoce1779_2|599257|organism=Nannochloropsis oceanica|type=mRNA|length=1898bp|location=Sequence derived from alignment at scaffold_20:309853..311750- (Nannochloropsis oceanica)
CGCTCCCGCTTACTGCTGTCATTCCCTCCTCCACGTAGGTTACTCGGGAG
AGGAGAGGAGGAGGAGGGGGAGGAGGAGGACTGGAGGAAGAAGGGAGAGG
GGAGTACTTCCACCTTGGTGGGTGGGGGTAGGACCAAGGGGGAGGCCGAG
TCACCACCACCACCGGCAGCAGCAGGAGGAGGAGCAGGAGGACCCTGTAG
CTGTCGGGTAAGCTCAGCGTGCTTTTCTACTTCTTCCGTTAGTGCTTGCC
TCCTTTGATGGAAGTGATAGAGCTGCATGTTGGCTGTGACGACCCTCAGG
ACCTGCTGCTGCGTGGCTACTGCTGCTCGATCCCTCGTTACCTTCACCTC
GGGTAGCCCAGCCCCTCCTTCTCCTTCCCCCAACACGGCCTGTTGGGCTT
CAAGGAGCTGCCATAGTTCGATTGAAAGTTGTGCACCTACTTGGCGTCGC
TCTCTTTCGCAGGCGAGGGCTAGTGCGTGTCGCTCTTGCTCGAGCTGCTT
GTGGAAAGAGGGAGGGATCGAGGGGAGGGAGGAAAGCTGTTGTTGGGCTT
GCGCGTGGCGGAGGGCGAGGCGTTGAGCGGCTTCGGCGTGTTTGTCGTCC
AAATGGGTCACGATAGTGGAGGCGAGTTGCTGCTTCATGGCTTGGATGAG
CCATTGGCCTTCTATGATGTCCAGGATGGTGGGGTCGGCCAGCAGGGCCT
TAACTGACTCGAGGGTGGAGTCGCTGAGGCCTGTCCCATAGGCGTCTTCC
ATATTGAGAAGGGCTTCAGTGGTGAAGAGCAAAGGGGGTGGCTCAAGGTC
TGTTGATTGGGGTGGTGGTAGCTGGGAGGGCGGAGGAAGGAGTGTGGCGG
TTGCTGCTGTTGGTCCTGCTGTTGATGATGCTGTTGCTATCCTTGCTGTT
TCTGGCATTATCGCTGCTGCTGCGATTCCTGCTTTTGTTTCTGTTGAAAC
CTCGTTCATCGTGTCGATCTGTGACTGATGAATGTCTGGTGCAGGAAGGT
GAAAGTCAGCAGCCTCAGCCCCCGCCACAGCAGCTAGGACGCGCGCGACG
GCATCGTCTACTGGAGCTACTGCTGTCTCTGCTTCTTCCTCTGCCGTTGG
TGTTGCCGGCTGTAATTCATCTACCTCCATCATTGTGGATGACTCTGCTG
CCGCCTCGTCAACCTTACCGTCCTGCTGTCCCTCCTTTTGCTTGTGCACT
TCTTTCTTTCCTTCCTCCTCCTCTTCCTCAGGCACATTAAGCATAGCCTT
GAGATGCGCCACCGTCTCAATCCCCTCCGTCCCCCCCCCCTCCTTTCGCC
TTGAGCGCCTCCAAGAACTCGGCCCAAATCACATCCCGCTCAGACTTGCT
CACCAGTACCTCCACCGCCCTCAAGTAGACTTTTTGCGCGTTGGCGAACT
TGCCTCGTTCCCGACAAAAGCGTCCGTACTCCACCCACAACTTGGGGGCC
TTCTCTCCAATCACATCAGTAGTGGCGCTTTCGAATACCTTGACTGCCTG
CTTCCACTGCCGCAAGCGCCGCTCAAACGCCGCATAAGCAAGCCACAGGT
CCACCAGCCCCTCTTCGTAGGGGCGACGACTCTCGGCGGACAAGGGGGGG
CTTGCTTCATCCAATAGACGGGAGTACTCGTCCGCCCACGCCGACAATGT
CTCCTCCCACAGCTTGCGGGCATCCTCCACACCGGTTGAGGCCAGCACAC
CCTCCACCTGTGCCTCGACACCTGGCAGGTCAAAGGCGGCAGAGGTGCTC
ATTGCTTGCTTAGATGAAATGAGGGGGCGTTAATGGACGTTGACGGAAAA
GGAGGTCGAGGTGCCGTACTGGTTGGTGTGTGGATGCCTTGTGCTGCACC
AAGCGACCGCTGGGAAATAATGCCAGCGTGCTGCACCTGCGGTGCTGT back to topCoding sequence (CDS) from alignment at scaffold_20:309853..311750- >mRNA_7584 ID=mRNA_7584|Name=jgi.p|Nanoce1779_2|599257|organism=Nannochloropsis oceanica|type=CDS|length=366bp|location=Sequence derived from alignment at scaffold_20:309853..311750- (Nannochloropsis oceanica)
ATGATGCTGTTGCTATCCTTGCTGTTTCTGGCATTATCGCTGCTGCTGCG
ATTCCTGCTTTTGTTTCTGTTGAAACCTCGTTCATCGTGTCGATCTGTGA
CTGATGAATGTCTGGTGCAGGAAGGTGAAAGTCAGCAGCCTCAGCCCCCG
CCACAGCAGCTAGGACGCGCGCGACGGCATCGTCTACTGGAGCTACTGCT
GTCTCTGCTTCTTCCTCTGCCGTTGGTGTTGCCGGCTGTAATTCATCTAC
CTCCATCATTGTGGATGACTCTGCTGCCGCCTCGTCAACCTTACCGTCCT
GCTGTCCCTCCTTTTGCTTGTGCACTTCTTTCTTTCCTTCCTCCTCCTCT
TCCTCAGGCACATTAA back to top
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