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Properties
Property Name | Value |
TranscriptId | 632403 |
Track | FilteredModels2 |
ProteinId | 632317 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_20 | supercontig | scaffold_20:189541..192872 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7531 ID=mRNA_7531|Name=jgi.p|Nanoce1779_2|632317|organism=Nannochloropsis oceanica|type=mRNA|length=2601bp ACAGGAACTTCTCTCGCACTTGGACATTCAAGAAGAAATGGTACTGGAAA TACTAACACCGCGTGTGTGGGATCTCCTGAGCCCGGGCGGCAAGAACACT CAGCAGGTCTTGCAAGGAGAACTTGACCGCATGATTGCCCGCTTCCCGGA TGCCAAGCCCAAGGACCTGAAACGATTTTTGATGGGCTTCCACCAGAAAG CGGACAAGGCGATTTCAGCATACGAGGCGCACTTGAAGTGGTGAGTGTTT TGCTGCTTGAAATGATGTTGTCATGGTATGGCACAGGGAAAGGAGAGAGA GACGAGAGAGGGATAACAAAGAATTATCTCCACACCCTTTTCCCTCCCCA CTTTCCAAGGCGCGCCGAGAACCTGCCCGTTACCAAAGAATCATGCCTGA CCGAGCTGCAGAAGGGTCGCTTCTACTTCCATGGGTCCGACAAAAAGGGT CGGCCCGTGGCTTACTACTCGCTGGCGTGCCATGACCCCAAACATCGAGA TCTTGCGGAAATCATGCGGATGATGACATATCAGGTAGTCTTACTCATAA AATTCTTTTCATCATTTTGCTTCCTCTACCCCTTTTACCCTTTGCCTCGT TCATTGCCTCTTGCTCTTGCTTGGGCCACAAGCAAAAGAGAACTTCTTAT TCCTCCCTCCATTCCCCACTGACTAATTCCCTTCTTTCTCCCTCCACGCC ACAGGTCGAAAAGGCCTTGTCGGAAATGCCGGACAATGTAAAGGGCTTTA CCATCATCTGGGACACGCGCAACACGGGCATGAAGGTAGGGATAGTATGG GGAAAGGAAAGGGAGGAAAGGCCGTTTACCTACACTCACACACTCTCCGC TAAATTCACTGAAAACAGAACACCGACACGGAATTCCTCCGGGAATTTTT AAATTTCTTTCGTGCGCAGTACCCCGAGGTACTGGCTCAGCTGGTTATTG CTCCAGTGGGATTGCTGCAGCGGACGATGTGGAATGCATTTGCGCGGTTC TTGGACGAACGCCGGGCGTCTCGTATTCGGATGGTGGCCACGATGGAGGG GTTGAGGGAGTATGTGGACACAGAGGAACTATTGGCGAGCTGTGGGGGGA AGAACACGTGGGCATTTGATCCGAGTGAGGTTTAGATTTCCTGAGGGGAG GAGGAAGGGCGATAGAATGTAAGGCTTCAATGAGGACAGAGAAAGGAATA TCCGAGTGTATGTCTTTGTGAATGTTTGCGGTGTTTACATATCATAATTT AACAGGTATATCGAAGAGTTGCTGTGATTTAAACGAAAAAAATGGTTGTC GCCACGGTACAATACCTTTCTCTCTCTGACTCAAATATTACTTCGGCAAG TTTGTAAAAAATTTCAGGTCGCTACAAGACATATGTTTCTTGTTGACGGC TCTGATTATAATCACTGCTTGATCTTCATTTCCTTGCTGCCTTGTGCTGT TCGACACTGACGGCCAACCTCATCATACCTCCATACAGTGTCTGACAAAG AGCTCATAGAAAGCAAAAATGCTGAAGTTGACACACGAACGAAGCCTTTC CACATTCTATCGTTTTTGTGCTTGAGGTATTCTTGGGATCAAAATATCAT TCTGGCGTTCGCTTTTGTTTTACCTTGGGTGCAAAGTAGAAAAGAAATGA TGGAGGCTTGCACGAGTCGTGGTGGCCAGGCCAAAGCGATCAGCCAGCAG TCACAATCCGCCACCCCCTCCTGCTCTGTCACGCTTCATCGCCAGCAGCA GCAGCGCACCCGGAGCAACGCAGCAGCTCGCAGCACCTGTACTTTTACAA CAACTATGCGCATCCTCGTAGGCGTCAAGCGTGTAATTGACTATGCCGTC AAAGTACGCGTTGCCGCCGACAAGAAAGGCGTAGAGCTCAACAATGTTAA GCACTCTATGAACCCCTTCTGCGAAATAGCCGTCGAAGAAGCCGTGCGCC TCAAGGAGAAAAAAGTCGCCACCGAGATTGTTGCAGTCTCCGTAGGGCCC AAGCAAGCACAAGAGACTCTGCGGACCGCCCTTGCCATGGGCGTTGACCG CAGCATTCACATCGAGACGTCCCTAAGGCCTGACCAAGAGATCCAGCCCC TGGCAGTGGCCAAAATCCTCTCCAAGCTCGTCGAGAAGGAAAAGGCCGGA TTGGTTATCCTGGGGAAACAGTCCATTGATGGTGACTACGCACAGACCGC CCCTATGCTTGCTGCCTTGCTCGGATGGCCCCAGGCGACGTTTTCCGCGG GGGTGGAGCCTGTGGACGGCAACAAGGCCCTGCAGGTAGAGCGAGAAACA GACACAGGCTCAGAAGTCCTCAAAATTAATCTACCAGCGGTGATCTCGAC GGATTTGCGGTTGAATACTCCGAGATACGCCACCATCCCCAACATTATGA AGGCCAAGAAGAAGCCCATGGAGCTCCTCACCTCCGAAGCACTAGGGATC GATCTTACGCCGAAAATAACCGTGCTTTCCGTGGCAGATCCGCCCAAGAG GAAGGGGGGCATCATGGTGGAGACGGTGGATGAGCTCGTAGACAAGCTCA AAAACGAGGCGAAAGTGGTCTAGAGGAAGGGAGGGAGGGAGGGAGGGAGG G back to topprotein sequence of jgi.p|Nanoce1779_2|632317 >mRNA_7531-protein ID=mRNA_7531-protein|Name=jgi.p|Nanoce1779_2|632317|organism=Nannochloropsis oceanica|type=polypeptide|length=309bp MMEACTSRGGQAKAISQQSQSATPSCSVTLHRQQQQRTRSNAAARSTCTF TTTMRILVGVKRVIDYAVKVRVAADKKGVELNNVKHSMNPFCEIAVEEAV RLKEKKVATEIVAVSVGPKQAQETLRTALAMGVDRSIHIETSLRPDQEIQ PLAVAKILSKLVEKEKAGLVILGKQSIDGDYAQTAPMLAALLGWPQATFS AGVEPVDGNKALQVERETDTGSEVLKINLPAVISTDLRLNTPRYATIPNI MKAKKKPMELLTSEALGIDLTPKITVLSVADPPKRKGGIMVETVDELVDK LKNEAKVV* back to topmRNA from alignment at scaffold_20:189541..192872+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7531 ID=mRNA_7531|Name=jgi.p|Nanoce1779_2|632317|organism=Nannochloropsis oceanica|type=mRNA|length=3332bp|location=Sequence derived from alignment at scaffold_20:189541..192872+ (Nannochloropsis oceanica) ACAGGAACTTCTCTCGCACTTGGACATTCAAGAAGAAATGGTACTGGAAA
TACTAACACCGCGTGTGTGGGATCTCCTGAGCCCGGGCGGCAAGAACACT
CAGCAGGTCTTGCAAGGAGAACTTGACCGCATGATTGCCCGCTTCCCGGA
TGCCAAGCCCAAGGACCTGAAACGATTTTTGATGGGCTTCCACCAGAAAG
CGGACAAGGCGATTTCAGCATACGAGGCGCACTTGAAGTGGTGAGTGTTT
TGCTGCTTGAAATGATGTTGTCATGGTATGGCACAGGGAAAGGAGAGAGA
GACGAGAGAGGGATAACAAAGAATTATCTCCACACCCTTTTCCCTCCCCA
CTTTCCAAGGCGCGCCGAGAACCTGCCCGTTACCAAAGAATCATGCCTGA
CCGAGCTGCAGAAGGGTCGCTTCTACTTCCATGGGTCCGACAAAAAGGGT
CGGCCCGTGGCTTACTACTCGCTGGCGTGCCATGACCCCAAACATCGAGA
TCTTGCGGAAATCATGCGGATGATGACATATCAGGTAGTCTTACTCATAA
AATTCTTTTCATCATTTTGCTTCCTCTACCCCTTTTACCCTTTGCCTCGT
TCATTGCCTCTTGCTCTTGCTTGGGCCACAAGCAAAAGAGAACTTCTTAT
TCCTCCCTCCATTCCCCACTGACTAATTCCCTTCTTTCTCCCTCCACGCC
ACAGGTCGAAAAGGCCTTGTCGGAAATGCCGGACAATGTAAAGGGCTTTA
CCATCATCTGGGACACGCGCAACACGGGCATGAAGGTAGGGATAGTATGG
GGAAAGGAAAGGGAGGAAAGGCCGTTTACCTACACTCACACACTCTCCGC
TAAATTCACTGAAAACAGAACACCGACACGGAATTCCTCCGGGAATTTTT
AAATTTCTTTCGTGCGCAGTACCCCGAGGTACTGGCTCAGCTGGTTATTG
CTCCAGTGGGATTGCTGCAGCGGACGATGTGGAATGCATTTGCGCGGTTC
TTGGACGAACGCCGGGCGTCTCGTATTCGGATGGTGGCCACGATGGAGGG
GTTGAGGGAGTATGTGGACACAGAGGAACTATTGGCGAGCTGTGGGGGGA
AGAACACGTGGGCATTTGATCCGAGTGAGGTTTAGATTTCCTGAGGGGAG
GAGGAAGGGCGATAGAATGTAAGGCTTCAATGAGGACAGAGAAAGGAATA
TCCGAGTGTATGTCTTTGTGAATGTTTGCGGTGTTTACATATCATAATTT
AACAGGTATATCGAAGAGTTGCTGTGATTTAAACGAAAAAAATGGTTGTC
GCCACGGTACAATACCTTTCTCTCTCTGACTCAAATATTACTTCGGCAAG
TTTGTAAAAAATTTCAGGTCGCTACAAGACATATGTTTCTTGTTGACGGC
TCTGATTATAATCACTGCTTGATCTTCATTTCCTTGCTGCCTTGTGCTGT
TCGACACTGACGGCCAACCTCATCATACCTCCATACAGTGTCTGACAAAG
AGCTCATAGAAAGCAAAAATGCTGAAGTTGACACACGAACGAAGCCTTTC
CACATTCTATCGTTTTTGTGCTTGAGGTATTCTTGGGATCAAAATATCAT
TCTGGCGTTCGCTTTTGTTTTACCTTGGGTGCAAAGTAGAAAAGAAATGA
TGGTAAGTTCGCGACGGACAGAAATCGATTAACACTTTTGATGAAGAACA
GACACAACGGCAACGGCTGAAGCTGCGGCTTCGTCATGATGACTGACCGG
CGACCAAATGCGAACCTTCTGCATCGCCCACATCAAACACAGCCCACTCA
CCAGCAAACTTCCCTCTCACTGCCGTCACAGGAGGCTTGCACGAGTCGTG
GTGGCCAGGCCAAAGCGATCAGCCAGCAGTCACAATCCGCCACCCCCTCC
TGCTCTGTCACGCTTCATCGCCAGCAGCAGCAGCGCACCCGGAGCAACGC
AGCAGCTCGCAGCACCTGTACTTTTACAACAACTATGCGCATCCTCGTAG
GCGTCAAGCGTGTAATTGACTATGCCGTCAAAGTACGCGTTGCCGCCGAC
AAGAAAGGTAAGTGTCTACGTGGGCAGATGGGTAGAGGGTTGGGACGGGG
TCTCCAGACCCCTCGTCGGCGATGCCCAAAGGCACCTCTCAATTGCCAAG
CAGCTTCAAGCACTGTTACCACAGGGCAGCCGCAAGTCCGACTTTTTCCA
GTATCCTTCGCTAAGTATGCCCCCCACTCCCTCCTCCTTCCCTTCCTCCT
TCTTCCCCCCCCCCCCCACACTAGGCGTAGAGCTCAACAATGTTAAGCAC
TCTATGAACCCCTTCTGCGAAATAGCCGTCGAAGAAGCCGTGCGCCTCAA
GGAGAAAAAAGTCGCCACCGAGATTGTTGCAGTCTCCGTAGGGCCCAAGC
AAGCACAAGAGACTCTGCGGACCGCCCTTGCCATGGGCGTTGACCGCAGC
ATTCACATCGAGACGTCCCTAAGGCCTGACCAAGAGATCCAGCCCCTGGC
AGTGGCCAAAATCCTCTCCAAGCTCGTCGAGAAGGAAAAGGCCGGATTGG
TTATCCTGGGGAAACAGTCCATTGATGGTGACTACGCACAGACCGCCCCT
ATGCTTGCTGCCTTGCTCGGATGGCCCCAGGCGACGTTTTCCGCGGGGGT
GGAGCCTGTGGACGGCAACAAGGCCCTGCAGGTAGAGCGAGAAACAGACA
CAGGCTCAGAAGTCCTCAAAATTAATCTACCAGCGGTGATCTCGACGGAT
TTGCGGTTGAATACTCCGAGGTAAGTGGAGATGCTTGGGCGTGCCTTTCC
TCCCTCTCCCTGCATCAGTTTGACTCTCGTACACTCGCACACATGCACAT
ACATATACCCATGCGTTCACATTGTCTTTGAAAAGCATAGAATCACTTCC
GTCAGCAACGTAAATTATGTTTTAAAAGAAAGAAGCGGACGGAATTCCTT
GAACCTCCATTCTTCCCTCGGCATCGTTAAGCCTCCTAGACAAACCCCAC
TCAAAACCCTTCCCTTCCTCCCTCCCTCCCTCCATTCCCTCCCTTCCCTC
CCTCCCTTTCCTTCCTTCCCTTCTTTCCCTCCCTTGCCTCCCTTGAACCT
TGTAGATACGCCACCATCCCCAACATTATGAAGGCCAAGAAGAAGCCCAT
GGAGCTCCTCACCTCCGAAGCACTAGGGATCGATCTTACGCCGAAAATAA
CCGTGCTTTCCGTGGCAGATCCGCCCAAGAGGAAGGGGGGCATCATGGTG
GAGACGGTGGATGAGCTCGTAGACAAGCTCAAAAACGAGGCGAAAGTGGT
CTAGAGGAAGGGAGGGAGGGAGGGAGGGAGGG back to topCoding sequence (CDS) from alignment at scaffold_20:189541..192872+ >mRNA_7531 ID=mRNA_7531|Name=jgi.p|Nanoce1779_2|632317|organism=Nannochloropsis oceanica|type=CDS|length=3708bp|location=Sequence derived from alignment at scaffold_20:189541..192872+ (Nannochloropsis oceanica) ATGATGGAGGCTTGCACGAGTCGTGGTGGCCAGGCCAAAGCGATCAGCCA GCAGTCACAATCCGCCACCCCCTCCTGCTCTGTCACGCTTCATCGCCAGC AGCAGCAGCGCACCCGGAGCAACGCAGCAGCTCGCAGCACCTGTACTTTT ACAACAACTATGCGCATCCTCGTAGGCGTCAAGCGTGTAATTGACTATGC CGTCAAAGTACGCGTTGCCGCCGACAAGAAAGGCGTAGAGCTCAACAATG TTAAGCACTCTATGAACCCCTTCTGCGAAATAGCCGTCGAAGAAGCCGTG CGCCTCAAGGAGAAAAAAGTCGCCACCGAGATTGTTGCAGTCTCCGTAGG GCCCAAGCAAGCACAAGAGACTCTGCGGACCGCCCTTGCCATGGGCGTTG ACCGCAGCATTCACATCGAGACGTCCCTAAGGCCTGACCAAGAGATCCAG CCCCTGGCAGTGGCCAAAATCCTCTCCAAGCTCGTCGAGAAGGAAAAGGC CGGATTGGTTATCCTGGGGAAACAGTCCATTGATGGTGACTACGCACAGA CCGCCCCTATGCTTGCTGCCTTGCTCGGATGGCCCCAGGCGACGTTTTCC GCGGGGGTGGAGCCTGTGGACGGCAACAAGGCCCTGCAGGTAGAGCGAGA AACAGACACAGGCTCAGAAGTCCTCAAAATTAATCTACCAGCGGTGATCT CGACGGATTTGCGGTTGAATACTCCGAGATACGCCACCATCCCCAACATT ATGAAGGCCAAGAAGAAGCCCATGGAGCTCCTCACCTCCGAAGCACTAGG GATCGATCTTACGCCGAAAATAACCGTGCTTTCCGTGGCAGATCCGCCCA AGAGGAAGGGGGGCATCATGGTGGAGACGGTGGATGAGCTCGTAGACAAG CTCAAAAACGAGGCGAAAGTGGTCTAGATGATGGAGGCTTGCACGAGTCG TGGTGGCCAGGCCAAAGCGATCAGCCAGCAGTCACAATCCGCCACCCCCT CCTGCTCTGTCACGCTTCATCGCCAGCAGCAGCAGCGCACCCGGAGCAAC GCAGCAGCTCGCAGCACCTGTACTTTTACAACAACTATGCGCATCCTCGT AGGCGTCAAGCGTGTAATTGACTATGCCGTCAAAGTACGCGTTGCCGCCG ACAAGAAAGGCGTAGAGCTCAACAATGTTAAGCACTCTATGAACCCCTTC TGCGAAATAGCCGTCGAAGAAGCCGTGCGCCTCAAGGAGAAAAAAGTCGC CACCGAGATTGTTGCAGTCTCCGTAGGGCCCAAGCAAGCACAAGAGACTC TGCGGACCGCCCTTGCCATGGGCGTTGACCGCAGCATTCACATCGAGACG TCCCTAAGGCCTGACCAAGAGATCCAGCCCCTGGCAGTGGCCAAAATCCT CTCCAAGCTCGTCGAGAAGGAAAAGGCCGGATTGGTTATCCTGGGGAAAC AGTCCATTGATGGTGACTACGCACAGACCGCCCCTATGCTTGCTGCCTTG CTCGGATGGCCCCAGGCGACGTTTTCCGCGGGGGTGGAGCCTGTGGACGG CAACAAGGCCCTGCAGGTAGAGCGAGAAACAGACACAGGCTCAGAAGTCC TCAAAATTAATCTACCAGCGGTGATCTCGACGGATTTGCGGTTGAATACT CCGAGATACGCCACCATCCCCAACATTATGAAGGCCAAGAAGAAGCCCAT GGAGCTCCTCACCTCCGAAGCACTAGGGATCGATCTTACGCCGAAAATAA CCGTGCTTTCCGTGGCAGATCCGCCCAAGAGGAAGGGGGGCATCATGGTG GAGACGGTGGATGAGCTCGTAGACAAGCTCAAAAACGAGGCGAAAGTGGT CTAGATGATGGAGGCTTGCACGAGTCGTGGTGGCCAGGCCAAAGCGATCA GCCAGCAGTCACAATCCGCCACCCCCTCCTGCTCTGTCACGCTTCATCGC CAGCAGCAGCAGCGCACCCGGAGCAACGCAGCAGCTCGCAGCACCTGTAC TTTTACAACAACTATGCGCATCCTCGTAGGCGTCAAGCGTGTAATTGACT ATGCCGTCAAAGTACGCGTTGCCGCCGACAAGAAAGGCGTAGAGCTCAAC AATGTTAAGCACTCTATGAACCCCTTCTGCGAAATAGCCGTCGAAGAAGC CGTGCGCCTCAAGGAGAAAAAAGTCGCCACCGAGATTGTTGCAGTCTCCG TAGGGCCCAAGCAAGCACAAGAGACTCTGCGGACCGCCCTTGCCATGGGC GTTGACCGCAGCATTCACATCGAGACGTCCCTAAGGCCTGACCAAGAGAT CCAGCCCCTGGCAGTGGCCAAAATCCTCTCCAAGCTCGTCGAGAAGGAAA AGGCCGGATTGGTTATCCTGGGGAAACAGTCCATTGATGGTGACTACGCA CAGACCGCCCCTATGCTTGCTGCCTTGCTCGGATGGCCCCAGGCGACGTT TTCCGCGGGGGTGGAGCCTGTGGACGGCAACAAGGCCCTGCAGGTAGAGC GAGAAACAGACACAGGCTCAGAAGTCCTCAAAATTAATCTACCAGCGGTG ATCTCGACGGATTTGCGGTTGAATACTCCGAGATACGCCACCATCCCCAA CATTATGAAGGCCAAGAAGAAGCCCATGGAGCTCCTCACCTCCGAAGCAC TAGGGATCGATCTTACGCCGAAAATAACCGTGCTTTCCGTGGCAGATCCG CCCAAGAGGAAGGGGGGCATCATGGTGGAGACGGTGGATGAGCTCGTAGA CAAGCTCAAAAACGAGGCGAAAGTGGTCTAGATGATGGAGGCTTGCACGA GTCGTGGTGGCCAGGCCAAAGCGATCAGCCAGCAGTCACAATCCGCCACC CCCTCCTGCTCTGTCACGCTTCATCGCCAGCAGCAGCAGCGCACCCGGAG CAACGCAGCAGCTCGCAGCACCTGTACTTTTACAACAACTATGCGCATCC TCGTAGGCGTCAAGCGTGTAATTGACTATGCCGTCAAAGTACGCGTTGCC GCCGACAAGAAAGGCGTAGAGCTCAACAATGTTAAGCACTCTATGAACCC CTTCTGCGAAATAGCCGTCGAAGAAGCCGTGCGCCTCAAGGAGAAAAAAG TCGCCACCGAGATTGTTGCAGTCTCCGTAGGGCCCAAGCAAGCACAAGAG ACTCTGCGGACCGCCCTTGCCATGGGCGTTGACCGCAGCATTCACATCGA GACGTCCCTAAGGCCTGACCAAGAGATCCAGCCCCTGGCAGTGGCCAAAA TCCTCTCCAAGCTCGTCGAGAAGGAAAAGGCCGGATTGGTTATCCTGGGG AAACAGTCCATTGATGGTGACTACGCACAGACCGCCCCTATGCTTGCTGC CTTGCTCGGATGGCCCCAGGCGACGTTTTCCGCGGGGGTGGAGCCTGTGG ACGGCAACAAGGCCCTGCAGGTAGAGCGAGAAACAGACACAGGCTCAGAA GTCCTCAAAATTAATCTACCAGCGGTGATCTCGACGGATTTGCGGTTGAA TACTCCGAGATACGCCACCATCCCCAACATTATGAAGGCCAAGAAGAAGC CCATGGAGCTCCTCACCTCCGAAGCACTAGGGATCGATCTTACGCCGAAA ATAACCGTGCTTTCCGTGGCAGATCCGCCCAAGAGGAAGGGGGGCATCAT GGTGGAGACGGTGGATGAGCTCGTAGACAAGCTCAAAAACGAGGCGAAAG TGGTCTAG back to top
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