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Properties
Property Name | Value |
TranscriptId | 672882 |
Track | FilteredModels2 |
ProteinId | 672796 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_20 | supercontig | scaffold_20:154683..155866 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7514 ID=mRNA_7514|Name=jgi.p|Nanoce1779_2|672796|organism=Nannochloropsis oceanica|type=mRNA|length=1184bp GCCACTACACAGCACGCAGGCACCGCAACAAGTGCAGGCACGAGCAGCAA CACTCGTGGTTACGTGATTCCTTGTTCTGCCTTTCCATCGTGTTGCTTCC AGACGTCCAACACATCCTCTCCTTCCTAACGCCGTCATCACACAGTACCA GAGGCTTCATCACACAAATGGCCCTGCCACCACCGTTACCCACATCTCCA GCGTCCTTCCTGTCCACCCCCATTCTCCGCAACATTTCCCTCGCCTTTCT CTTCGCCACTGCACTCTCCTACCGTGGCTTGCGAAAACAATCCCTCTCCA AAAGCGGTGCCCTGGCCGCGTGGGTCGTTGGCTTCCTGACCATGGCAACC TCCCTACGGTTCGGAGCCCTCATGATTCTCTTCTACCAAAGCAGCAGCAT GCTCACAAAATTCCGTTCGGAAACGAAAGCGCGATTTGAAGAAGATCACA AGCAAGGTGGTCAACGCTCCGCGGCTCAAGTCCTCGCGTGCTCTTTCCTG GGTACACTTGTCGCTGCTGCTTTTGCCTGCATCATCGGCGAAGACAACGA GCCTTTGAATTTCGATAAGTATCCGCTTCGTAGTCAATTGCTTTGTGCGT ACGTGGGGCATTATGCATGTTGTAATGGTGATACGTGGGCGTCTGAAATA GGGATCTTGAGTCCTTCTTCCCCTCGCTTAGTAACGGTGTTTTTCCGTCG GGTTGTGCCGCGAGGGACGAATGGAGGCATGTCGTGGACGGGCACTGGGG CGTCAATTGCTGGCGGGGCTTTCATAGGCGTGGGGTATACGGTTGTTGGT TTCTTGCTTGGGATCGGGGATGAGGGGAGAAGAGAGGGGTGGGTGCCGGG TTGGATGTTTATGTGTGTGGTTGGTGCGACATGCGGGTTTTTGGGGAGTC TGTGTGATTCTGTGTTGGGTGGGTTGCTACAACCGACGTGGTTTTGCGCG GATAGGAAGAGGGTGGTGAAGCATCCGAGGGAGGGGGAGAAAGAGGGGGG GAGGAGGGGAAGTGTGACTTTGATAAGTGGGATGGATATTCTGACGAACG AACAGGTGAATGTGCTGTCGGTGCTGGTGACGACGCTTCTGGCACCGATG TTGGGCAGATTGTTGTGGTATAGTTAGATCTATTCGCATGGACGAGAAGT AAATCAAAAAGTAAAAGTACCTACCTTATGCAAT back to topprotein sequence of jgi.p|Nanoce1779_2|672796 >mRNA_7514-protein ID=mRNA_7514-protein|Name=jgi.p|Nanoce1779_2|672796|organism=Nannochloropsis oceanica|type=polypeptide|length=320bp MALPPPLPTSPASFLSTPILRNISLAFLFATALSYRGLRKQSLSKSGALA AWVVGFLTMATSLRFGALMILFYQSSSMLTKFRSETKARFEEDHKQGGQR SAAQVLACSFLGTLVAAAFACIIGEDNEPLNFDKYPLRSQLLCAYVGHYA CCNGDTWASEIGILSPSSPRLVTVFFRRVVPRGTNGGMSWTGTGASIAGG AFIGVGYTVVGFLLGIGDEGRREGWVPGWMFMCVVGATCGFLGSLCDSVL GGLLQPTWFCADRKRVVKHPREGEKEGGRRGSVTLISGMDILTNEQVNVL SVLVTTLLAPMLGRLLWYS* back to topmRNA from alignment at scaffold_20:154683..155866- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7514 ID=mRNA_7514|Name=jgi.p|Nanoce1779_2|672796|organism=Nannochloropsis oceanica|type=mRNA|length=1184bp|location=Sequence derived from alignment at scaffold_20:154683..155866- (Nannochloropsis oceanica) GCCACTACACAGCACGCAGGCACCGCAACAAGTGCAGGCACGAGCAGCAA
CACTCGTGGTTACGTGATTCCTTGTTCTGCCTTTCCATCGTGTTGCTTCC
AGACGTCCAACACATCCTCTCCTTCCTAACGCCGTCATCACACAGTACCA
GAGGCTTCATCACACAAATGGCCCTGCCACCACCGTTACCCACATCTCCA
GCGTCCTTCCTGTCCACCCCCATTCTCCGCAACATTTCCCTCGCCTTTCT
CTTCGCCACTGCACTCTCCTACCGTGGCTTGCGAAAACAATCCCTCTCCA
AAAGCGGTGCCCTGGCCGCGTGGGTCGTTGGCTTCCTGACCATGGCAACC
TCCCTACGGTTCGGAGCCCTCATGATTCTCTTCTACCAAAGCAGCAGCAT
GCTCACAAAATTCCGTTCGGAAACGAAAGCGCGATTTGAAGAAGATCACA
AGCAAGGTGGTCAACGCTCCGCGGCTCAAGTCCTCGCGTGCTCTTTCCTG
GGTACACTTGTCGCTGCTGCTTTTGCCTGCATCATCGGCGAAGACAACGA
GCCTTTGAATTTCGATAAGTATCCGCTTCGTAGTCAATTGCTTTGTGCGT
ACGTGGGGCATTATGCATGTTGTAATGGTGATACGTGGGCGTCTGAAATA
GGGATCTTGAGTCCTTCTTCCCCTCGCTTAGTAACGGTGTTTTTCCGTCG
GGTTGTGCCGCGAGGGACGAATGGAGGCATGTCGTGGACGGGCACTGGGG
CGTCAATTGCTGGCGGGGCTTTCATAGGCGTGGGGTATACGGTTGTTGGT
TTCTTGCTTGGGATCGGGGATGAGGGGAGAAGAGAGGGGTGGGTGCCGGG
TTGGATGTTTATGTGTGTGGTTGGTGCGACATGCGGGTTTTTGGGGAGTC
TGTGTGATTCTGTGTTGGGTGGGTTGCTACAACCGACGTGGTTTTGCGCG
GATAGGAAGAGGGTGGTGAAGCATCCGAGGGAGGGGGAGAAAGAGGGGGG
GAGGAGGGGAAGTGTGACTTTGATAAGTGGGATGGATATTCTGACGAACG
AACAGGTGAATGTGCTGTCGGTGCTGGTGACGACGCTTCTGGCACCGATG
TTGGGCAGATTGTTGTGGTATAGTTAGATCTATTCGCATGGACGAGAAGT
AAATCAAAAAGTAAAAGTACCTACCTTATGCAAT back to topCoding sequence (CDS) from alignment at scaffold_20:154683..155866- >mRNA_7514 ID=mRNA_7514|Name=jgi.p|Nanoce1779_2|672796|organism=Nannochloropsis oceanica|type=CDS|length=960bp|location=Sequence derived from alignment at scaffold_20:154683..155866- (Nannochloropsis oceanica) ATGGCCCTGCCACCACCGTTACCCACATCTCCAGCGTCCTTCCTGTCCAC CCCCATTCTCCGCAACATTTCCCTCGCCTTTCTCTTCGCCACTGCACTCT CCTACCGTGGCTTGCGAAAACAATCCCTCTCCAAAAGCGGTGCCCTGGCC GCGTGGGTCGTTGGCTTCCTGACCATGGCAACCTCCCTACGGTTCGGAGC CCTCATGATTCTCTTCTACCAAAGCAGCAGCATGCTCACAAAATTCCGTT CGGAAACGAAAGCGCGATTTGAAGAAGATCACAAGCAAGGTGGTCAACGC TCCGCGGCTCAAGTCCTCGCGTGCTCTTTCCTGGGTACACTTGTCGCTGC TGCTTTTGCCTGCATCATCGGCGAAGACAACGAGCCTTTGAATTTCGATA AGTATCCGCTTCGTAGTCAATTGCTTTGTGCGTACGTGGGGCATTATGCA TGTTGTAATGGTGATACGTGGGCGTCTGAAATAGGGATCTTGAGTCCTTC TTCCCCTCGCTTAGTAACGGTGTTTTTCCGTCGGGTTGTGCCGCGAGGGA CGAATGGAGGCATGTCGTGGACGGGCACTGGGGCGTCAATTGCTGGCGGG GCTTTCATAGGCGTGGGGTATACGGTTGTTGGTTTCTTGCTTGGGATCGG GGATGAGGGGAGAAGAGAGGGGTGGGTGCCGGGTTGGATGTTTATGTGTG TGGTTGGTGCGACATGCGGGTTTTTGGGGAGTCTGTGTGATTCTGTGTTG GGTGGGTTGCTACAACCGACGTGGTTTTGCGCGGATAGGAAGAGGGTGGT GAAGCATCCGAGGGAGGGGGAGAAAGAGGGGGGGAGGAGGGGAAGTGTGA CTTTGATAAGTGGGATGGATATTCTGACGAACGAACAGGTGAATGTGCTG TCGGTGCTGGTGACGACGCTTCTGGCACCGATGTTGGGCAGATTGTTGTG GTATAGTTAG back to top
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