jgi.p|Nanoce1779_2|641192, mRNA_7510 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|641192
Unique NamemRNA_7510
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length423
Alignment locationscaffold_20:148168..148590 -

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Properties
Property NameValue
TranscriptId641278
TrackFilteredModels2
ProteinId641192
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_20supercontigscaffold_20:148168..148590 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|641192gene_7510Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_7510CDS_7510Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|641192mRNA_7510-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_7510 ID=mRNA_7510|Name=jgi.p|Nanoce1779_2|641192|organism=Nannochloropsis oceanica|type=mRNA|length=423bp
ATGTCGTTTTATGGAGAGCAACGCCGGAAGCTGGAAGAGGAAGCAGAAGC
AAAGCAAATGGAGTGGGCAAATAATTTCAACGAATTGATTGTGACGCAAG
GACCGGAATTGTGCGTTTGTGGATACGAGGGATACGTGCGGTCAGGGAGC
AAGGGAGCAGTTTGTGTGTATTGTGATGAGGAGGAAGGGGAGGAGGGGCT
ACAATCCTGTTCCTCCCTGTCTTTCACGACACTCGAAGAGCTCTTGGCCG
ACCCCAGGATGGACGGGGGCATAAAGGAACAAGTCGCTGAAAGGGTGATG
AGCTACGAGCCGGATGTGGAAGTGGCTGTCCTTTTTGCGTTCTCCGGACA
GGTGGGACTAAACGTGTTGAGACCCACCTATCCGCCCAAGTTTTTATATG
AGACCTTGAAGGGAAAGAAGTAG
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protein sequence of jgi.p|Nanoce1779_2|641192

>mRNA_7510-protein ID=mRNA_7510-protein|Name=jgi.p|Nanoce1779_2|641192|organism=Nannochloropsis oceanica|type=polypeptide|length=141bp
MSFYGEQRRKLEEEAEAKQMEWANNFNELIVTQGPELCVCGYEGYVRSGS
KGAVCVYCDEEEGEEGLQSCSSLSFTTLEELLADPRMDGGIKEQVAERVM
SYEPDVEVAVLFAFSGQVGLNVLRPTYPPKFLYETLKGKK*
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mRNA from alignment at scaffold_20:148168..148590-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7510 ID=mRNA_7510|Name=jgi.p|Nanoce1779_2|641192|organism=Nannochloropsis oceanica|type=mRNA|length=423bp|location=Sequence derived from alignment at scaffold_20:148168..148590- (Nannochloropsis oceanica)
ATGTCGTTTTATGGAGAGCAACGCCGGAAGCTGGAAGAGGAAGCAGAAGC
AAAGCAAATGGAGTGGGCAAATAATTTCAACGAATTGATTGTGACGCAAG
GACCGGAATTGTGCGTTTGTGGATACGAGGGATACGTGCGGTCAGGGAGC
AAGGGAGCAGTTTGTGTGTATTGTGATGAGGAGGAAGGGGAGGAGGGGCT
ACAATCCTGTTCCTCCCTGTCTTTCACGACACTCGAAGAGCTCTTGGCCG
ACCCCAGGATGGACGGGGGCATAAAGGAACAAGTCGCTGAAAGGGTGATG
AGCTACGAGCCGGATGTGGAAGTGGCTGTCCTTTTTGCGTTCTCCGGACA
GGTGGGACTAAACGTGTTGAGACCCACCTATCCGCCCAAGTTTTTATATG
AGACCTTGAAGGGAAAGAAGTAG
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Coding sequence (CDS) from alignment at scaffold_20:148168..148590-

>mRNA_7510 ID=mRNA_7510|Name=jgi.p|Nanoce1779_2|641192|organism=Nannochloropsis oceanica|type=CDS|length=423bp|location=Sequence derived from alignment at scaffold_20:148168..148590- (Nannochloropsis oceanica)
ATGTCGTTTTATGGAGAGCAACGCCGGAAGCTGGAAGAGGAAGCAGAAGC
AAAGCAAATGGAGTGGGCAAATAATTTCAACGAATTGATTGTGACGCAAG
GACCGGAATTGTGCGTTTGTGGATACGAGGGATACGTGCGGTCAGGGAGC
AAGGGAGCAGTTTGTGTGTATTGTGATGAGGAGGAAGGGGAGGAGGGGCT
ACAATCCTGTTCCTCCCTGTCTTTCACGACACTCGAAGAGCTCTTGGCCG
ACCCCAGGATGGACGGGGGCATAAAGGAACAAGTCGCTGAAAGGGTGATG
AGCTACGAGCCGGATGTGGAAGTGGCTGTCCTTTTTGCGTTCTCCGGACA
GGTGGGACTAAACGTGTTGAGACCCACCTATCCGCCCAAGTTTTTATATG
AGACCTTGAAGGGAAAGAAGTAG
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Synonyms
Publications