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Properties
| Property Name | Value |
|---|
| TranscriptId | 599038 |
| Track | FilteredModels2 |
| ProteinId | 598952 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_20 | supercontig | scaffold_20:100433..106008 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7495 ID=mRNA_7495|Name=jgi.p|Nanoce1779_2|598952|organism=Nannochloropsis oceanica|type=mRNA|length=848bp
GGAGGAGGAGGAGGAGGAGGAGGATGGTTGGTGAAGGAGGAGCAGGAAGA
GGGCCGAGGCAGGATGCCGCAGCGGCACCGGCGCCGACGGGGATGGACGC
CGTAGTGGTGACGATGCCAGCACCAATAGCAGCGACACCACCTCCAGCAG
CTGCAGCTGCAGCTGCAGCTGCAGCTTTAGCCGCAGAAGGAGACCAAAAA
AGTGTTGGAGGGGCTTTCTCCTCTTATTTTCCATCTTCCCCTCTTCCTCT
GCCTCCCGCGACACCGACGGCCTCCGTGATGGCGCCACCCGCACCCCAAC
CATCACCATCATCAGCATCAAAAATCATCGTCCGCAGAAGAGGAGACACG
GAAGAACGACAAGCTAAAAATGACGGCGGCAACGGCGGTAGCAGCAGCAG
CATCAGCTGTCCAATGACCCCCACGGCAGCAGCTGCAGCAGCCGCAGCCG
AGGCTGTGGCTGTCAGACAAAGAGGGGGAGAAATGTGTGGAGGAGGGGGA
GGAAATGGTGAAGGAGGAGCAGGAGGAGCAGGAGGAGCAGTAGGGAAGTT
CGAAAGACGAGGGGAGAGAGAGAGAGGTGATTATGATGCGTCCTCGGCCG
AGGACCAAATAATACAGGGCTGCACCACTACCCACCCCTCCCTCCAGCCC
TCGTTCTTCCTCCGCTACCTCCCCTTCCTCCTCCTCCTCCTCTTTTTCCT
ACCATATTTCTTCACCAGCCCTCAAGGTTTTACGTCGTCGTTTCCAACAT
CTGAAATCTATTGTCAGAACGCAGGAGGGGCTAATCACGGAACAGGAGCA
GCAGCGACAGTTGCTCCGCACGGCCCTCGCAAAGGAAGGGAAAATTAA back to topprotein sequence of jgi.p|Nanoce1779_2|598952 >mRNA_7495-protein ID=mRNA_7495-protein|Name=jgi.p|Nanoce1779_2|598952|organism=Nannochloropsis oceanica|type=polypeptide|length=275bp
MVGEGGAGRGPRQDAAAAPAPTGMDAVVVTMPAPIAATPPPAAAAAAAAA
ALAAEGDQKSVGGAFSSYFPSSPLPLPPATPTASVMAPPAPQPSPSSASK
IIVRRRGDTEERQAKNDGGNGGSSSSISCPMTPTAAAAAAAAEAVAVRQR
GGEMCGGGGGNGEGGAGGAGGAVGKFERRGERERGDYDASSAEDQIIQGC
TTTHPSLQPSFFLRYLPFLLLLLFFLPYFFTSPQGFTSSFPTSEIYCQNA
GGANHGTGAAATVAPHGPRKGREN* back to topmRNA from alignment at scaffold_20:100433..106008+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7495 ID=mRNA_7495|Name=jgi.p|Nanoce1779_2|598952|organism=Nannochloropsis oceanica|type=mRNA|length=5576bp|location=Sequence derived from alignment at scaffold_20:100433..106008+ (Nannochloropsis oceanica)
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGATCGTTGGTGGGATGCATGTCCTCCGGGTCCTTTTTCCTTGAGAT
TCATGTCCTCCTCTTCTCCATGTCATACCACTAAGCACGTACCAACTTGA
ACCGAAAGTCTTCAAACTCCTCTTTCTCCTCCTTGTCCCATCCCGCGCCT
TGCCCCCCCTCGATCCTTCCGTCGGTCCCTGCCTCCTCGGGATAGACCAT
CTTCTCCACCAAAACCCCCACCAGCTCCTGGAGGACGGCGCCGTACCTCT
CACCGACGCCGCGCCCTCCTCCCTCCCTCCCTCCCTCCCTGGCCAGCTCG
TACCAAAAGGGCAGAGCATAGCTGGCGATGGAGGGGTCTGGGTGGGAGGT
GGCGAGGAGGAGGAGCCGAAGGAGGGCATCCTGCTCGTAGGGATGGGGGG
AGAGGAGGAGGGGGAGGTACGAAAGGCCCATTTCGACAAAAACCATGCAT
ATCCCCTTGGCTGTGTCCACGTCGCCGAGGGAGGGGAGGGAGGAGGAAGG
GGGGGCGCGGCGGAGGGCCGCGAGGTAGGTGGGTCGGAGAGCGAAGACGT
TGGGGACAAGGAAGGAGGCGAGAGAGAGGTGGGCCTCAAGGGGAGGGGCG
TCAGGGCGGGAGCTGAGGGAAGGAAGGTGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGTGAAGTTCGACTCGAGTGGCATTTTCGCTCTCACTACCTTC
CTCCCTTCCTCGCTTCCTCCCTTCCTCCGTCCGTACTTCTTCGCTTCTTC
CAAGACGTGTAATCCTAATCCCTGCGACCGAACAAAGCTTTATCCTCACA
ACAGATTCAAACACTTGAAGCGGTTTCTGCTACTGCCGTCACCATTTTCC
TTGTCGACGCGCGCACGAACGACAACAATACAGAGCCAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAAAGAAGGGGTCCTTACCAGTCA
TGTGCCACGAAAACGTCAATGAGGAGATCGACCGCCGACTCAAACAACAT
GTCCCCGCCATTCTTGTTCCCTTGCGCAACGACTGCAAAGGCATCCAAAA
TCACTTTGTTTTCAATCAAGTCTGACGGAGGGAGCTCCTGGGGGAGGAGA
AAAGCCGGGGGGAGGGAGGGAGGGAGGGAGGGGTGGTGAGCACCGTCATG
GTGAAAAAGCGGGTTGATGGACGGAGACGATGGTTGAACGGCCAAGAGGA
GAAGGAAGAAGGAAGGGGAGGGGGATAAACAAGAGAGAGGGAAGGAACTA
GGGAGGAAGAGGAGGAGGAAGAAAACGTACCCGGAAGTTGGTGATCCATC
GGCCCATCCCTCGGAAGATCTTCCGCTGTGGTTGTGGCAGTGATGGTATC
GGATATTGAGGTATGGGGGTATAGAGTATCGGGGTATCGGATATTGGAGT
ATTGGGGTATTGGGGTATAGAGTATCGGGGTATTGGGTATTGGGTGTTGG
GTTTTGGGTATTGGGGTATTGGGTATTGGGTGTTGGGTATTTGGGTATTG
GGTTATTGGAGATTAAGTGTTGGGTATTACGTGTGATAACCCTGCTTGGA
CCCATGCGTCTACTGCCGCGGGGTTGGAGGGAGGAAGGAAGGGAAGGAGG
GAGAGAGGAGGAAGGAAGGGAGGGCAAGCGTACCTGGAGCATGGCAGGGG
AAGTGATCCCTGCGTCGGCCCCTACGTCCACTGCTGCCAAGTAAGCAAAG
ACGTGCGGGCGGAGCTGCATCAGCTGGCACCGAAAATGCTCTTGTGCGTC
ACGAGAGAGCGAGGAGGAAGAAAATTGGTTGCTTGTGGCTTCCATGGGCA
GCTCTTCGAGGAGGTGGAGAAGGTGTTCCTGTGGTACCCCGTGGGAGGCG
AGGAGGTTGATGCACTCCGTTAGGACGCCCTGCCAGTTGGTCTGTAGCCA
TATTTTGGGGGGTGGGTGATTGGACATTAAGAAACGTGAACAATGATCAG
AATGTGAAAACGATAACTAAGTATCCTCTTAGACCGAGGTGGTGGTTCGT
ATGGGCCGTGTATTTCGATGGAGAGGTCGTCGAGGAGGCAGAAAAGGGAG
GGAAGGAAAGGAGAAGGATAACCGTAGCGGGGAAGAAAGAATAGGATGAA
AACGAGCATCATACACCACACGACCATCAGAAGACGTGAGGGAGGGAGGG
AGGGGGGAAGGACATTACACAGAATCCAAAGCTGACTAGGGGTGTGGAAG
TCCACCTCAAGTCGGGCGCCAGGAGAGGTGGGTGGTTTTTCATTCTCGCG
CTTGACTCTGCAGTTGGATGGACATAGTCACCGCCAGATCACTGGAGGCC
TCTCCCCATAAGTAAGAATGTTCATCTAGACGGCCGGCTCACCGTGCCTT
TCATGGCATATATACATGTATGTACACTACACGATAGATAAAACAATAAA
TTAATACAAGAAGGCCTACTATCATTTTTAACGTACATTTAAACTTAAAA
TAAAATAAAGAAGCCCCACCCATACAAATCAAAATACAGCTGAATAAGCC
TCTCTAATTTCTTACTCCCCTTTCCGCCTTCCCTCCCTTCCTTCCTCCCT
CCCTCCCTCCTTATCTCCCTCCCGCCCTACCTGCACCGCGACCGCCGCCA
ACACCACACACAGTCGGTTCAAAAACGCACTCAAGTCCCCCATGCGCCCA
CTGCTGCTGCTGCTGCCGCTGCTGCTGCCATTGGCTCCTTGCCGACGGCG
GGCACTCCAGGTGGCGAGGTGCTTCACCAACTGCTGCTTGAACGGCTCGA
TCCTACATGGTTTCCGACCAATCAGATGATAAGGACGTGGGGTGTGTGTA
TTTTCCGGTTAAGGTTATGATGCCTCTTCCTTTCCTTCATCCCTCCTCCC
CTTTCTCTCACTCTGTAAACTCTTGGTTTCCCGCCTCGCCCGCCCTCCCT
CCCTCCCTCCCTCCTTCCCTCCTTTCCTCGCGAGAGAAGACCTAGATGAC
GCTTACTACCAGATTGTTTCCCTTCATTCCCTCCCCCCTCCCTCCCTCCC
TCCCCCCTCCACCTCCTACCCTCCTTGGTCAGCCTTTGATTCCCATCAAT
GTCACACAAGACACGTAAGACCCTCCCTCCCTCCTTCATTCCTTCCTTCC
TCCGACTCCCTCCCTATCCATCCTCCACCTCCCTCCCTTCTTCCCACCTT
CAATTTCCTCCTCGATCTTCGTCGCCAGCGCCCTCTTTCTTAAATCCATC
CTGTCATACCTCCCTCCTCCCCCCTAACCCCCTCTCTCCAAATACCACAC
ATACCCACCTCTCCTCCTTTGCTCCGCACCTCCGCAGTTTCTTCCCAGCG
ACACCACTGACCCACACACACCCTCATCCATCCCCTCCTTCCCCTCTTCC
ACCCTCCCTTCCTCCCCCTCCGCCTCAAACTCACATGCCCGGCTCCAACT
CCTCCCAATCCATGTATACTTTCGTCTGTAATGTTTTTGCCGCAAAGAAA
AGAACAGGAGCACTTGAACTGTCGTTGCTTAAAATCGCGTCCGCCACGGC
CCATGCTTGTGGGTAGTGCTGAAAGGCTTCTAGCCATCTGTGGTATTGGA
CGTGGACGGTGATGTTTAAAGGGATGGATGAGAAGGAGGGAAGAAAGGAG
GGAGGAAAGGAGGGAGGGAAGAAGGGGGGGAAGGAGGTGGGGAAGGAGGG
AGGGGGACCTACGCTTCGGCTTGCTTGAACTCCTCCCGACTGTGGCCTTG
CCCGCCATAGAAGACACGTAGAGCCTCCTGGGTCTACATAAGTGTGTGCG
TCCGAGTGTCCAAAATGAGTGGTGCCGCACACGACGTAAGCTAGCCTCCC
CTCGCTCCTCGTCTTCCTCCCTTCCTCCCTCCGTGTCTTGTATTTCTTAC
CTGGAGCAGCATGGTCGCCGGGTCCATCTGCGCCGGCGTTGGTAGGCCGG
TCATTTCGTAGATCGAGTCCCCTTTTGCACGTCTTGTGTGTGAGTGTGTG
TATGGGTAAGAGAGAAGAGTCAGTGCCTCTTGTGGCCGTTGCTCGTCCGA
CGATGATGCTTTCTAGTGGGGAGGCTAAACCTGTCCCAGACATCATACTC
TCGCACGCCACACAAGCCGGCACACTACAGAATATCAGCGAGGCTGCATG
GCTCTCTGTGTAGGCTTGCATGCTGCTGCTGGTGGGAGTGGTTGGACATC
CCGACACTTTCTTTCCTCTACTCTTATTCCTCATAGTCCGGAACCGGAAG
CGAGCGTGGGTATCTTAGGGTTGGTAGTGATGAAAAGGTGGCGCGCTACG
GCCAGGACCAAAAGCAAATCATTAAAGTCAGCAGCAACTCCAGGCACATT
CACTATCTTATTCCTCCCCTGCTAGGATTAGAATGCGGCAATGTTTATTT
CTGCCTCGCCATAGGACCGAACTTTACACGATATGACGACATCTAAACCC
ATCCCCTCATCCCCTAAGACATCAGGACACCAAGTTGGCCGTCTTCTTCT
TTTTCCACTTTGAGACGTCCGCCACCACGAGCTGTACACCTTCCTGCGAG
TATGGTTGGTGAAGGAGGAGCAGGAAGAGGGCCGAGGCAGGATGCCGCAG
CGGCACCGGCGCCGACGGGGATGGACGCCGTAGTGGTGACGATGCCAGCA
CCAATAGCAGCGACACCACCTCCAGCAGCTGCAGCTGCAGCTGCAGCTGC
AGCTTTAGCCGCAGAAGGAGACCAAAAAAGTGTTGGAGGGGCTTTCTCCT
CTTATTTTCCATCTTCCCCTCTTCCTCTGCCTCCCGCGACACCGACGGCC
TCCGTGATGGCGCCACCCGCACCCCAACCATCACCATCATCAGCATCAAA
AATCATCGTCCGCAGAAGAGGAGACACGGAAGAACGACAAGCTAAAAATG
ACGGCGGCAACGGCGGTAGCAGCAGCAGCATCAGCTGTCCAATGACCCCC
ACGGCAGCAGCTGCAGCAGCCGCAGCCGAGGCTGTGGCTGTCAGACAAAG
AGGGGGAGAAATGTGTGGAGGAGGGGGAGGAAATGGTGAAGGAGGAGCAG
GAGGAGCAGGAGGAGCAGTAGGGAAGTTCGAAAGACGAGGGGAGAGAGAG
AGAGGTGATTATGATGCGTCCTCGGCCGAGGACCAAATAATAGTGAGCGG
CCTGGTCTCCCTCCTCGCCGCCGACACAGCCGAGAAGGAAGTCGACCGGC
TCCTCTCCGACCCGGTCACTCCCTCCCTTCCTCCCCCCGCTCCTCCGTCA
TCGCCTACCTCATTTTCAAATTTTGCTGCTACTGCTGCTGCTGGTGCTGC
CGGTGCGGCGGACCTCTCCACCCTCGCGGCTGCCGTCCTCAGCAGGGCTG
CACCACTACCCACCCCTCCCTCCAGCCCTCGTTCTTCCTCCGCTACCTCC
CCTTCCTCCTCCTCCTCCTCTTTTTCCTACCATATTTCTTCACCAGCCCT
CAAGGTTTTACGTCGTCGTTTCCAACATCTGAAATCTATTGTCAGAACGC
AGGAGGGGCTAATCACGGAACAGGAGCAGCAGCGACAGTTGCTCCGCACG
GCCCTCGCAAAGGAAGGGAAAATTAA back to topCoding sequence (CDS) from alignment at scaffold_20:100433..106008+ >mRNA_7495 ID=mRNA_7495|Name=jgi.p|Nanoce1779_2|598952|organism=Nannochloropsis oceanica|type=CDS|length=1650bp|location=Sequence derived from alignment at scaffold_20:100433..106008+ (Nannochloropsis oceanica)
ATGGTTGGTGAAGGAGGAGCAGGAAGAGGGCCGAGGCAGGATGCCGCAGC
GGCACCGGCGCCGACGGGGATGGACGCCGTAGTGGTGACGATGCCAGCAC
CAATAGCAGCGACACCACCTCCAGCAGCTGCAGCTGCAGCTGCAGCTGCA
GCTTTAGCCGCAGAAGGAGACCAAAAAAGTGTTGGAGGGGCTTTCTCCTC
TTATTTTCCATCTTCCCCTCTTCCTCTGCCTCCCGCGACACCGACGGCCT
CCGTGATGGCGCCACCCGCACCCCAACCATCACCATCATCAGCATCAAAA
ATCATCGTCCGCAGAAGAGGAGACACGGAAGAACGACAAGCTAAAAATGA
CGGCGGCAACGGCGGTAGCAGCAGCAGCATCAGCTGTCCAATGACCCCCA
CGGCAGCAGCTGCAGCAGCCGCAGCCGAGGCTGTGGCTGTCAGACAAAGA
GGGGGAGAAATGTGTGGAGGAGGGGGAGGAAATGGTGAAGGAGGAGCAGG
AGGAGCAGGAGGAGCAGTAGGGAAGTTCGAAAGACGAGGGGAGAGAGAGA
GAGGTGATTATGATGCGTCCTCGGCCGAGGACCAAATAATACAGGGCTGC
ACCACTACCCACCCCTCCCTCCAGCCCTCGTTCTTCCTCCGCTACCTCCC
CTTCCTCCTCCTCCTCCTCTTTTTCCTACCATATTTCTTCACCAGCCCTC
AAGGTTTTACGTCGTCGTTTCCAACATCTGAAATCTATTGTCAGAACGCA
GGAGGGGCTAATCACGGAACAGGAGCAGCAGCGACAGTTGCTCCGCACGG
CCCTCGCAAAGGAAGGGAAAATTAAATGGTTGGTGAAGGAGGAGCAGGAA
GAGGGCCGAGGCAGGATGCCGCAGCGGCACCGGCGCCGACGGGGATGGAC
GCCGTAGTGGTGACGATGCCAGCACCAATAGCAGCGACACCACCTCCAGC
AGCTGCAGCTGCAGCTGCAGCTGCAGCTTTAGCCGCAGAAGGAGACCAAA
AAAGTGTTGGAGGGGCTTTCTCCTCTTATTTTCCATCTTCCCCTCTTCCT
CTGCCTCCCGCGACACCGACGGCCTCCGTGATGGCGCCACCCGCACCCCA
ACCATCACCATCATCAGCATCAAAAATCATCGTCCGCAGAAGAGGAGACA
CGGAAGAACGACAAGCTAAAAATGACGGCGGCAACGGCGGTAGCAGCAGC
AGCATCAGCTGTCCAATGACCCCCACGGCAGCAGCTGCAGCAGCCGCAGC
CGAGGCTGTGGCTGTCAGACAAAGAGGGGGAGAAATGTGTGGAGGAGGGG
GAGGAAATGGTGAAGGAGGAGCAGGAGGAGCAGGAGGAGCAGTAGGGAAG
TTCGAAAGACGAGGGGAGAGAGAGAGAGGTGATTATGATGCGTCCTCGGC
CGAGGACCAAATAATACAGGGCTGCACCACTACCCACCCCTCCCTCCAGC
CCTCGTTCTTCCTCCGCTACCTCCCCTTCCTCCTCCTCCTCCTCTTTTTC
CTACCATATTTCTTCACCAGCCCTCAAGGTTTTACGTCGTCGTTTCCAAC
ATCTGAAATCTATTGTCAGAACGCAGGAGGGGCTAATCACGGAACAGGAG
CAGCAGCGACAGTTGCTCCGCACGGCCCTCGCAAAGGAAGGGAAAATTAA back to top
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