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Properties
| Property Name | Value |
|---|
| TranscriptId | 599029 |
| Track | FilteredModels2 |
| ProteinId | 598943 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_20 | supercontig | scaffold_20:92174..94007 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7491 ID=mRNA_7491|Name=jgi.p|Nanoce1779_2|598943|organism=Nannochloropsis oceanica|type=mRNA|length=1834bp
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCATCTTTTACCGCCAA
CTTTCGTATACATGCAAACCGGTCGTCGGCGTAATGCTCGACATCCAGAG
AGTTTCGCCCCCCTCCGTTCCACTCCCTTTCCAACCTTGCCAGCTGACGC
ATGAAGGACGGGTTCGGACTCGTGCATGGCCTCCGTTCCCGCACAAAACT
AAAGGCCTCCAACAAGGGCATCTTGTAGTACTTCATTAGATATGCAATGA
CTACCGACGTCGATCGACTCATTCCGTTCCGGCAGTGTACCAGGCAGGCA
TGCCCCCCTGCCCTCGCCCTCTCCACCATGTCGAAGGCAGTCTCCAACTT
CTCGTTTGTCAGCTCCTCCGACAAGGAGTCCAGCAAATACAGCTGGCAAT
AGTCCCCCTGCCCGTACGGATGGTGAGGGTAGTAATCCTTCATGGTCGTG
TTGACGATGTGGGTTATGTTGAAGGTCTCCGCAAGGGCATCCTGGCTCGG
AATGTGCTCCCCACCCACATACAGGTAATCGAGTATCTTGCTCCCATCAT
ATTGGAAGTCCATCGTGCTTAGGGATGGGGGGCCAATGGAACTACATGCC
CGCAGACCTGTCTCCAATACTAATTTCCTGTTTCCGTTCTTGCTGTTGAC
GTTGCTCTTCTTGCTTGGGGTTGCGGCAGCACTGCTGGTGCAGTTGCCCG
AGGGGGGAAGGGACGATGGGCAAGGATCATCTTCGACAGAAATCGTGGCC
CGGCGGCGGAGACGAAAAAGTGAACTCATTAGGGAGGTAGATGACGAGAC
TCCTTTGCTGCTGCTGCTGCCGTTATTGGCGCCGCTGCCGCTGCCAGTGA
GGGGGGGCAAGGCGCGGGGGGGCAGTATAGAGGAGGGGTGGGAGGAGTTA
CCCTTGGGAGTCAGAATAAGGTTTGGAAAGCCGCGCTTTTTTTTTATATT
GTCAGCTATGATGCCGTGAGATGGGGGCGTAGAGGTGGAATGCGACCCAT
TATTGTTCATCCCTACTAGGGTGGCCAAGGCCGAGTTGGAGCGCTTGAAG
AAGGCGAAGGTGGGGGTGCGTCCTGATGGTGGAAGGCAAGGGCTGGTATT
GTTGCTGGTGCTACAGCAGTCGTTATCCTCATCTCCGCTGTCGTCGTCCT
CGTCTTCTTCTCGTCCTCCGTGCGGTTGCTGCTGCTGCTGTCTGCCTGTT
GGTCTAAGCATCACTTCTTGGTCATCCACGGAGACGCCCAGCGTCAGACT
TCTTGCGCTTCTGGTCGTGCTGCTGCTGCTACTGCTGCGACTGCTCCTAC
TACTGTGCTGTGTCGGGGTCACGCTCCCTCGAACGTTGGGAAGGCCACCG
TTAACGGCGTCAAGGCCGTGTCGTGGGATAGCGCAGGGAGGGGAAGATGG
GCCCGAGCCTGCTAGTGAGGAAGAGGAAGAGGCCGAGGCAAGACCCTTGG
TGGAGGAGGAGGACAGAGCGCACGGGCTGAGAATGGTGCAAGGGTCTTGC
GTGGTACTTGGGTCATCGTGGTCCAGGCTTTCGGCGCGGTTGTGACTGCT
CGTGTTGATCCTGCCAGAGAGGCCTGCGAAAAGCATGAATGGCTCCTCTA
ACATGAGGGGGGCCGGGCGGGAAGGGCGTACCATGCGACAAAGTAGGTAT
TGATGATGTTAATGTGCTTGCTGCTGGTTGGGGTGTTCGTTTTGCTACAG
CTCCTGTTGATTGTAATTAGAGCCGGGGTAACCCAGTACCGATCGAGACC
GAAGACCAGGACGACAGAGGCACGACGGTCCTTTTTGGGAAAGGGGCAAG
CGGCGGATGCGGCAGAGGCAGTTTCGTGCCCTGT back to topprotein sequence of jgi.p|Nanoce1779_2|598943 >mRNA_7491-protein ID=mRNA_7491-protein|Name=jgi.p|Nanoce1779_2|598943|organism=Nannochloropsis oceanica|type=polypeptide|length=128bp
MELHARRPVSNTNFLFPFLLLTLLFLLGVAAALLVQLPEGGRDDGQGSSS
TEIVARRRRRKSELIREVDDETPLLLLLPLLAPLPLPVRGGKARGGSIEE
GWEELPLGVRIRFGKPRFFFILSAMMP* back to topmRNA from alignment at scaffold_20:92174..94007- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7491 ID=mRNA_7491|Name=jgi.p|Nanoce1779_2|598943|organism=Nannochloropsis oceanica|type=mRNA|length=1834bp|location=Sequence derived from alignment at scaffold_20:92174..94007- (Nannochloropsis oceanica)
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCATCTTTTACCGCCAA
CTTTCGTATACATGCAAACCGGTCGTCGGCGTAATGCTCGACATCCAGAG
AGTTTCGCCCCCCTCCGTTCCACTCCCTTTCCAACCTTGCCAGCTGACGC
ATGAAGGACGGGTTCGGACTCGTGCATGGCCTCCGTTCCCGCACAAAACT
AAAGGCCTCCAACAAGGGCATCTTGTAGTACTTCATTAGATATGCAATGA
CTACCGACGTCGATCGACTCATTCCGTTCCGGCAGTGTACCAGGCAGGCA
TGCCCCCCTGCCCTCGCCCTCTCCACCATGTCGAAGGCAGTCTCCAACTT
CTCGTTTGTCAGCTCCTCCGACAAGGAGTCCAGCAAATACAGCTGGCAAT
AGTCCCCCTGCCCGTACGGATGGTGAGGGTAGTAATCCTTCATGGTCGTG
TTGACGATGTGGGTTATGTTGAAGGTCTCCGCAAGGGCATCCTGGCTCGG
AATGTGCTCCCCACCCACATACAGGTAATCGAGTATCTTGCTCCCATCAT
ATTGGAAGTCCATCGTGCTTAGGGATGGGGGGCCAATGGAACTACATGCC
CGCAGACCTGTCTCCAATACTAATTTCCTGTTTCCGTTCTTGCTGTTGAC
GTTGCTCTTCTTGCTTGGGGTTGCGGCAGCACTGCTGGTGCAGTTGCCCG
AGGGGGGAAGGGACGATGGGCAAGGATCATCTTCGACAGAAATCGTGGCC
CGGCGGCGGAGACGAAAAAGTGAACTCATTAGGGAGGTAGATGACGAGAC
TCCTTTGCTGCTGCTGCTGCCGTTATTGGCGCCGCTGCCGCTGCCAGTGA
GGGGGGGCAAGGCGCGGGGGGGCAGTATAGAGGAGGGGTGGGAGGAGTTA
CCCTTGGGAGTCAGAATAAGGTTTGGAAAGCCGCGCTTTTTTTTTATATT
GTCAGCTATGATGCCGTGAGATGGGGGCGTAGAGGTGGAATGCGACCCAT
TATTGTTCATCCCTACTAGGGTGGCCAAGGCCGAGTTGGAGCGCTTGAAG
AAGGCGAAGGTGGGGGTGCGTCCTGATGGTGGAAGGCAAGGGCTGGTATT
GTTGCTGGTGCTACAGCAGTCGTTATCCTCATCTCCGCTGTCGTCGTCCT
CGTCTTCTTCTCGTCCTCCGTGCGGTTGCTGCTGCTGCTGTCTGCCTGTT
GGTCTAAGCATCACTTCTTGGTCATCCACGGAGACGCCCAGCGTCAGACT
TCTTGCGCTTCTGGTCGTGCTGCTGCTGCTACTGCTGCGACTGCTCCTAC
TACTGTGCTGTGTCGGGGTCACGCTCCCTCGAACGTTGGGAAGGCCACCG
TTAACGGCGTCAAGGCCGTGTCGTGGGATAGCGCAGGGAGGGGAAGATGG
GCCCGAGCCTGCTAGTGAGGAAGAGGAAGAGGCCGAGGCAAGACCCTTGG
TGGAGGAGGAGGACAGAGCGCACGGGCTGAGAATGGTGCAAGGGTCTTGC
GTGGTACTTGGGTCATCGTGGTCCAGGCTTTCGGCGCGGTTGTGACTGCT
CGTGTTGATCCTGCCAGAGAGGCCTGCGAAAAGCATGAATGGCTCCTCTA
ACATGAGGGGGGCCGGGCGGGAAGGGCGTACCATGCGACAAAGTAGGTAT
TGATGATGTTAATGTGCTTGCTGCTGGTTGGGGTGTTCGTTTTGCTACAG
CTCCTGTTGATTGTAATTAGAGCCGGGGTAACCCAGTACCGATCGAGACC
GAAGACCAGGACGACAGAGGCACGACGGTCCTTTTTGGGAAAGGGGCAAG
CGGCGGATGCGGCAGAGGCAGTTTCGTGCCCTGT back to topCoding sequence (CDS) from alignment at scaffold_20:92174..94007- >mRNA_7491 ID=mRNA_7491|Name=jgi.p|Nanoce1779_2|598943|organism=Nannochloropsis oceanica|type=CDS|length=384bp|location=Sequence derived from alignment at scaffold_20:92174..94007- (Nannochloropsis oceanica)
ATGGAACTACATGCCCGCAGACCTGTCTCCAATACTAATTTCCTGTTTCC
GTTCTTGCTGTTGACGTTGCTCTTCTTGCTTGGGGTTGCGGCAGCACTGC
TGGTGCAGTTGCCCGAGGGGGGAAGGGACGATGGGCAAGGATCATCTTCG
ACAGAAATCGTGGCCCGGCGGCGGAGACGAAAAAGTGAACTCATTAGGGA
GGTAGATGACGAGACTCCTTTGCTGCTGCTGCTGCCGTTATTGGCGCCGC
TGCCGCTGCCAGTGAGGGGGGGCAAGGCGCGGGGGGGCAGTATAGAGGAG
GGGTGGGAGGAGTTACCCTTGGGAGTCAGAATAAGGTTTGGAAAGCCGCG
CTTTTTTTTTATATTGTCAGCTATGATGCCGTGA back to top
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