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Properties
| Property Name | Value |
|---|
| TranscriptId | 157255 |
| Track | FilteredModels2 |
| ProteinId | 157169 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_20 | supercontig | scaffold_20:72243..74211 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7482 ID=mRNA_7482|Name=jgi.p|Nanoce1779_2|157169|organism=Nannochloropsis oceanica|type=mRNA|length=1597bp
GTGGGCGAGGGTGGGCGAGGCCTGGTGGAGGGTGAGAAGGAAGGGGCACT
CACTCAGCCCTCCGTGCTTTTTTTCTACGCGCATCATCCACTCACGCACA
TTCCGTACAGCACACTTAGCCAGTGCGACTGCCCTAAATACTGCTGATCG
TAGAGATGGAGACGAGGGTGAGGCCACACTAGGCAGTGATGTCGATGAGA
TGGAAGATTTTAAGGCCAAGGTGAGGAAGTCCGACGAAGAGGAGGAGGAA
GAGAACAAGCAGGTGGAAGAGGACGAGGGAGATATGGGAGAAAATCAGCA
CCTATCGGAGTTTGATGGAGAAGCAGCAGCAGCAGTAGCAGCAGCAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
AGAAGCAAACGAAACAGATGGGAGGATCATGGCCACTGCCACTTCTCCGA
GCGAGGCAGAGGAGGAGGGCGAGGAAGGGAGGGAAGAGGAGGAGGAGAAT
GACGAGAACGAGGACTCCCAGGCGGTGTCGGATAGGTTCTTACTGAGCCA
AACGTTGAAGCAGGCAAAGTCGGCATGGATGCTGTACACGAGTGAGGCGC
GCGCAGCGTTGAAGAAGGCCCAACCCTCTCTTAAAGTCACGGAGCAACTC
AAGATAATGTCCGAGCAATGGAAATCCCTCTCTCGCGACGCCCGACAGCC
TTTCCTGGACCGTGCGGCCGCAGACAAGAAACGTTACTGGCACGACAAAC
AGCAATATGCCGAAGCCGAGCTTCGCGAGAAAACACGTCGGGCCAAGATG
CACAAGAAGGAGGGAGGGAGCGAGGGAGGGAGGGATCGAAGGAGGGAGCT
GAGCGAGGAGATGTTGTTCCCCTTGGCAAGGATTAGACGAGTCATGAAAC
TCGATCCGGAAGTAAAGACTATCTCGAAGGAGGCGGCGATGCTAGTGGCC
AAAGCGACGGAACTCTTCCTTGATCTGCTTGGAGAAGAAGCGCATAAGGC
TTCAGGAAAGAAGAAAACCCTTAAGGCTGATGACGTTACTGCAGCGATGC
GTCGTTATGGCCCATTTTGTTTTCTACGACCCGATTTTCCCATGGGAGGT
AGAGGAGGAGGAGGGGGAGGGAAGGAAAGAGAGGTGAAGAAAGGGAGTGA
GGCAGGAGGGGGAGGGAAAGGGAATATGAATGCGATAGCCAAGCTGGCAG
CGGCGGACCGGAGGAAGATGAAGGAAAGGACATGGGAAGGAGAAGAGGGA
AAGGGAGAGGGGGAGGAGGAGGGCGGGAAGGGATTGGAGGAGGGGAAAGA
GGCGGGAGCGGCAGGCAAGCAGAGAGGGCGTAAGTCTAAGGGGAAGGGTA
CAGCGGCGCATGTGGCCGTGGCCGAAGGAAAGGCGAATATCTCGAGCTTT
TTTGGAAAAAAAAAGGCGATGGAAGCGTCAGCCTTAAGTGGCAGTGAGAA
TAATTAGACATTCATGGGCGGGTAGGGGAGGTCGAGCAAAAGGGTGAAAA
AGCAAAAACCAAAAGGAGCGACACTCTTTATTGACTGGTTGGTACGA back to topprotein sequence of jgi.p|Nanoce1779_2|157169 >mRNA_7482-protein ID=mRNA_7482-protein|Name=jgi.p|Nanoce1779_2|157169|organism=Nannochloropsis oceanica|type=polypeptide|length=436bp
MEDFKAKVRKSDEEEEEENKQVEEDEGDMGENQHLSEFDGEAAAAVAAAE
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEANETDGRIMATATSP
SEAEEEGEEGREEEEENDENEDSQAVSDRFLLSQTLKQAKSAWMLYTSEA
RAALKKAQPSLKVTEQLKIMSEQWKSLSRDARQPFLDRAAADKKRYWHDK
QQYAEAELREKTRRAKMHKKEGGSEGGRDRRRELSEEMLFPLARIRRVMK
LDPEVKTISKEAAMLVAKATELFLDLLGEEAHKASGKKKTLKADDVTAAM
RRYGPFCFLRPDFPMGGRGGGGGGKEREVKKGSEAGGGGKGNMNAIAKLA
AADRRKMKERTWEGEEGKGEGEEEGGKGLEEGKEAGAAGKQRGRKSKGKG
TAAHVAVAEGKANISSFFGKKKAMEASALSGSENN* back to topmRNA from alignment at scaffold_20:72243..74211+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7482 ID=mRNA_7482|Name=jgi.p|Nanoce1779_2|157169|organism=Nannochloropsis oceanica|type=mRNA|length=1969bp|location=Sequence derived from alignment at scaffold_20:72243..74211+ (Nannochloropsis oceanica)
GTGGGCGAGGGTGGGCGAGGCCTGGTGGAGGGTGAGAAGGAAGGGGCACT
CACTCAGCCCTCCGTGCTTTTTTTCTACGCGCATCATCCACTCACGCACA
TTCCGTACAGCACACTTAGCCAGTGCGACTGCCCTAAATACTGCTGATCG
TAGAGATGGAGACGAGGGTGAGGCCACACTAGGCAGTGATGTCGATGAGA
TGGAAGATTTTAAGGCCAAGGTGAGGAAGTCCGACGAAGAGGAGGAGGAA
GAGAACAAGCAGGTGGAAGAGGACGAGGGAGATATGGGAGAAAATCAGCA
CCTATCGGAGTTTGATGGAGAAGCAGCAGCAGCAGTAGCAGCAGCAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
AGAAGCAAACGAAACAGATGGGAGGATCATGGCCACTGCCACTTCTCCGA
GCGAGGCAGAGGAGGAGGGCGAGGAAGGGAGGGAAGAGGAGGAGGAGAAT
GACGAGAACGAGGACTCCCAGGCGGTGTCGGATAGGTTCTTACTGAGCCA
AACGTTGAAGCAGGCAAAGTCGGCATGGATGCTGTACACGAGTGAGGCGC
GCGCAGCGTTGAAGAAGGTGAGTGAGCGAGGGTGGGAGGAAATGAAAGAG
GGAGGGAGGTTTGGCCTTTACCCTTTTCCCTTTTGTATTTATCCGTCCAT
ATTTTTCATTCATCAATTTGATAAATTAATCGAATATTCACACAGGCCCA
ACCCTCTCTTAAAGTCACGGAGCAACTCAAGATAATGTCCGAGCAATGGA
AATCCCTCTCTCGCGACGCCCGACAGCCTTTCCTGGACCGTGCGGCCGCA
GACAAGAAACGTTACTGGCACGACAAACAGCAATATGCCGAAGCCGAGCT
TCGCGAGAAAACACGTCGGGCCAAGATGCACAAGAAGGAGGGAGGGAGCG
AGGGAGGGAGGGATCGAAGGAGGGAGCTGAGCGAGGAGATGTTGTTCCCC
TTGGCAAGGATTAGACGAGTCATGAAACTCGATCCGGAAGTAAAGACTAT
CTCGAAGGAGGCGGCGATGCTAGTGGCCAAAGCGACGGTAACCAACTCCT
CCCTCCTTCCAACCCTCCTTCCGCCTTCTTTCTTTGAACTCAGCCTCCTT
CCCTTCCTCGCCCCCTCCCTCCCTCCACAAGCTTTTCGAGCTAATGGAAT
TTAGGGAGGAGTCAAATCCACAATCCAGACGGATATTAATTATTTAGCAG
AAGTATAAGTATTTTGCTATCTGCTCATTCTTGTTCCCTTTCTCCCTCCC
CCTTCTTTTTTAAAAATCATATGTATAACAGGAACTCTTCCTTGATCTGC
TTGGAGAAGAAGCGCATAAGGCTTCAGGAAAGAAGAAAACCCTTAAGGCT
GATGACGTTACTGCAGCGATGCGTCGTTATGGCCCATTTTGTTTTCTACG
ACCCGATTTTCCCATGGGAGGTAGAGGAGGAGGAGGGGGAGGGAAGGAAA
GAGAGGTGAAGAAAGGGAGTGAGGCAGGAGGGGGAGGGAAAGGGAATATG
AATGCGATAGCCAAGCTGGCAGCGGCGGACCGGAGGAAGATGAAGGAAAG
GACATGGGAAGGAGAAGAGGGAAAGGGAGAGGGGGAGGAGGAGGGCGGGA
AGGGATTGGAGGAGGGGAAAGAGGCGGGAGCGGCAGGCAAGCAGAGAGGG
CGTAAGTCTAAGGGGAAGGGTACAGCGGCGCATGTGGCCGTGGCCGAAGG
AAAGGCGAATATCTCGAGCTTTTTTGGAAAAAAAAAGGCGATGGAAGCGT
CAGCCTTAAGTGGCAGTGAGAATAATTAGACATTCATGGGCGGGTAGGGG
AGGTCGAGCAAAAGGGTGAAAAAGCAAAAACCAAAAGGAGCGACACTCTT
TATTGACTGGTTGGTACGA back to topCoding sequence (CDS) from alignment at scaffold_20:72243..74211+ >mRNA_7482 ID=mRNA_7482|Name=jgi.p|Nanoce1779_2|157169|organism=Nannochloropsis oceanica|type=CDS|length=3924bp|location=Sequence derived from alignment at scaffold_20:72243..74211+ (Nannochloropsis oceanica)
ATGGAAGATTTTAAGGCCAAGGTGAGGAAGTCCGACGAAGAGGAGGAGGA
AGAGAACAAGCAGGTGGAAGAGGACGAGGGAGATATGGGAGAAAATCAGC
ACCTATCGGAGTTTGATGGAGAAGCAGCAGCAGCAGTAGCAGCAGCAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGCAAACGAAACAGATGGGAGGATCATGGCCACTGCCACTTCTCCG
AGCGAGGCAGAGGAGGAGGGCGAGGAAGGGAGGGAAGAGGAGGAGGAGAA
TGACGAGAACGAGGACTCCCAGGCGGTGTCGGATAGGTTCTTACTGAGCC
AAACGTTGAAGCAGGCAAAGTCGGCATGGATGCTGTACACGAGTGAGGCG
CGCGCAGCGTTGAAGAAGGCCCAACCCTCTCTTAAAGTCACGGAGCAACT
CAAGATAATGTCCGAGCAATGGAAATCCCTCTCTCGCGACGCCCGACAGC
CTTTCCTGGACCGTGCGGCCGCAGACAAGAAACGTTACTGGCACGACAAA
CAGCAATATGCCGAAGCCGAGCTTCGCGAGAAAACACGTCGGGCCAAGAT
GCACAAGAAGGAGGGAGGGAGCGAGGGAGGGAGGGATCGAAGGAGGGAGC
TGAGCGAGGAGATGTTGTTCCCCTTGGCAAGGATTAGACGAGTCATGAAA
CTCGATCCGGAAGTAAAGACTATCTCGAAGGAGGCGGCGATGCTAGTGGC
CAAAGCGACGGAACTCTTCCTTGATCTGCTTGGAGAAGAAGCGCATAAGG
CTTCAGGAAAGAAGAAAACCCTTAAGGCTGATGACGTTACTGCAGCGATG
CGTCGTTATGGCCCATTTTGTTTTCTACGACCCGATTTTCCCATGGGAGG
TAGAGGAGGAGGAGGGGGAGGGAAGGAAAGAGAGGTGAAGAAAGGGAGTG
AGGCAGGAGGGGGAGGGAAAGGGAATATGAATGCGATAGCCAAGCTGGCA
GCGGCGGACCGGAGGAAGATGAAGGAAAGGACATGGGAAGGAGAAGAGGG
AAAGGGAGAGGGGGAGGAGGAGGGCGGGAAGGGATTGGAGGAGGGGAAAG
AGGCGGGAGCGGCAGGCAAGCAGAGAGGGCGTAAGTCTAAGGGGAAGGGT
ACAGCGGCGCATGTGGCCGTGGCCGAAGGAAAGGCGAATATCTCGAGCTT
TTTTGGAAAAAAAAAGGCGATGGAAGCGTCAGCCTTAAGTGGCAGTGAGA
ATAATTAGATGGAAGATTTTAAGGCCAAGGTGAGGAAGTCCGACGAAGAG
GAGGAGGAAGAGAACAAGCAGGTGGAAGAGGACGAGGGAGATATGGGAGA
AAATCAGCACCTATCGGAGTTTGATGGAGAAGCAGCAGCAGCAGTAGCAG
CAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
AGAAGAAGAAGAAGCAAACGAAACAGATGGGAGGATCATGGCCACTGCCA
CTTCTCCGAGCGAGGCAGAGGAGGAGGGCGAGGAAGGGAGGGAAGAGGAG
GAGGAGAATGACGAGAACGAGGACTCCCAGGCGGTGTCGGATAGGTTCTT
ACTGAGCCAAACGTTGAAGCAGGCAAAGTCGGCATGGATGCTGTACACGA
GTGAGGCGCGCGCAGCGTTGAAGAAGGCCCAACCCTCTCTTAAAGTCACG
GAGCAACTCAAGATAATGTCCGAGCAATGGAAATCCCTCTCTCGCGACGC
CCGACAGCCTTTCCTGGACCGTGCGGCCGCAGACAAGAAACGTTACTGGC
ACGACAAACAGCAATATGCCGAAGCCGAGCTTCGCGAGAAAACACGTCGG
GCCAAGATGCACAAGAAGGAGGGAGGGAGCGAGGGAGGGAGGGATCGAAG
GAGGGAGCTGAGCGAGGAGATGTTGTTCCCCTTGGCAAGGATTAGACGAG
TCATGAAACTCGATCCGGAAGTAAAGACTATCTCGAAGGAGGCGGCGATG
CTAGTGGCCAAAGCGACGGAACTCTTCCTTGATCTGCTTGGAGAAGAAGC
GCATAAGGCTTCAGGAAAGAAGAAAACCCTTAAGGCTGATGACGTTACTG
CAGCGATGCGTCGTTATGGCCCATTTTGTTTTCTACGACCCGATTTTCCC
ATGGGAGGTAGAGGAGGAGGAGGGGGAGGGAAGGAAAGAGAGGTGAAGAA
AGGGAGTGAGGCAGGAGGGGGAGGGAAAGGGAATATGAATGCGATAGCCA
AGCTGGCAGCGGCGGACCGGAGGAAGATGAAGGAAAGGACATGGGAAGGA
GAAGAGGGAAAGGGAGAGGGGGAGGAGGAGGGCGGGAAGGGATTGGAGGA
GGGGAAAGAGGCGGGAGCGGCAGGCAAGCAGAGAGGGCGTAAGTCTAAGG
GGAAGGGTACAGCGGCGCATGTGGCCGTGGCCGAAGGAAAGGCGAATATC
TCGAGCTTTTTTGGAAAAAAAAAGGCGATGGAAGCGTCAGCCTTAAGTGG
CAGTGAGAATAATTAGATGGAAGATTTTAAGGCCAAGGTGAGGAAGTCCG
ACGAAGAGGAGGAGGAAGAGAACAAGCAGGTGGAAGAGGACGAGGGAGAT
ATGGGAGAAAATCAGCACCTATCGGAGTTTGATGGAGAAGCAGCAGCAGC
AGTAGCAGCAGCAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGCAAACGAAACAGATGGGAGGATCATGGC
CACTGCCACTTCTCCGAGCGAGGCAGAGGAGGAGGGCGAGGAAGGGAGGG
AAGAGGAGGAGGAGAATGACGAGAACGAGGACTCCCAGGCGGTGTCGGAT
AGGTTCTTACTGAGCCAAACGTTGAAGCAGGCAAAGTCGGCATGGATGCT
GTACACGAGTGAGGCGCGCGCAGCGTTGAAGAAGGCCCAACCCTCTCTTA
AAGTCACGGAGCAACTCAAGATAATGTCCGAGCAATGGAAATCCCTCTCT
CGCGACGCCCGACAGCCTTTCCTGGACCGTGCGGCCGCAGACAAGAAACG
TTACTGGCACGACAAACAGCAATATGCCGAAGCCGAGCTTCGCGAGAAAA
CACGTCGGGCCAAGATGCACAAGAAGGAGGGAGGGAGCGAGGGAGGGAGG
GATCGAAGGAGGGAGCTGAGCGAGGAGATGTTGTTCCCCTTGGCAAGGAT
TAGACGAGTCATGAAACTCGATCCGGAAGTAAAGACTATCTCGAAGGAGG
CGGCGATGCTAGTGGCCAAAGCGACGGAACTCTTCCTTGATCTGCTTGGA
GAAGAAGCGCATAAGGCTTCAGGAAAGAAGAAAACCCTTAAGGCTGATGA
CGTTACTGCAGCGATGCGTCGTTATGGCCCATTTTGTTTTCTACGACCCG
ATTTTCCCATGGGAGGTAGAGGAGGAGGAGGGGGAGGGAAGGAAAGAGAG
GTGAAGAAAGGGAGTGAGGCAGGAGGGGGAGGGAAAGGGAATATGAATGC
GATAGCCAAGCTGGCAGCGGCGGACCGGAGGAAGATGAAGGAAAGGACAT
GGGAAGGAGAAGAGGGAAAGGGAGAGGGGGAGGAGGAGGGCGGGAAGGGA
TTGGAGGAGGGGAAAGAGGCGGGAGCGGCAGGCAAGCAGAGAGGGCGTAA
GTCTAAGGGGAAGGGTACAGCGGCGCATGTGGCCGTGGCCGAAGGAAAGG
CGAATATCTCGAGCTTTTTTGGAAAAAAAAAGGCGATGGAAGCGTCAGCC
TTAAGTGGCAGTGAGAATAATTAG back to top
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