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Properties
| Property Name | Value |
| TranscriptId | 545329 |
| Track | FilteredModels2 |
| ProteinId | 545243 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_20 | supercontig | scaffold_20:68184..70994 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7481 ID=mRNA_7481|Name=jgi.p|Nanoce1779_2|545243|organism=Nannochloropsis oceanica|type=mRNA|length=2741bp AGGGACGGTCAGAAAAGTGCCTCAGGGGCTTCGAACAAGGCGCCTGGATC ATGCATCAAGGACCCCCGCAGGGGCAGACTAGTGATTAGACGGCGACAGA GAACGGCGACGACGGGCTTCAGTCACACCCACGCACATCGGAATGGAGCA AGCAAGCATGGACTGTCTTGGCACCGACTGCAGGGCACGGCGTTTTCACT CCGCCCTGGACGGAGGCAGCAGCAGTAGCAGTAGCAGTAGCAGTAGCAGT AACAGTAGCAGCAACAGCAGTGATGTCCACCACGAGCAGCGTCACCATTA CCAGACCCACAAGTCTTGGGAAACGTGCGGGGACAGCACGCTGGCGGCCG CATGCGACGAGACGCTTGACGAGGAGGAGCTCGAAACCTTTGCCATCTGT ACCGTCCCCATCCCCTGCAGCAGTAGCAGCAGCAGGTACAGCTACAGAGC CACAACGACGATGATAACAAGCAATCACCAACCCTGTCGCAGCGCCTACT ACCAAAAAATCGGCCTGGCTCTTCCCCCTGAGGTAACACTGCACAACATG AAGCACTACGGACGTCGGCACTTTCTGAAATTGCGCGAGGCCGAAGTACA AAATGCTCCCGACCCCACGTACGAACATCGGCAGATAGAACTTCGCCCCG ACATGCGTGCCCAGCTCCTGGACTGGCTCATGGAAGTAAGTGCCAATTTC TTCGTCCGTCGCCGTACCTTTCAAGCAGCCGTCAACTACTGCGATCGGTT CCTGTCAACCGTTGCCGTTGTCTTTCCCAAGGAGAAGCTGCAGCTGCTGG CAATTACCTCCCTCTTTGTATCCTCAAAAATGGAAGAAGTTTACCCAGCC AAAGCCCAAGAACTCGCCGAAGCCACCGCCGGGGCATTCACCGCCTGCGA TATCGTTACATTTGAGATTGAGCTGATGACAAGCCTAGCCTGGAATCTCA CCCCCCCAACGTCCGACGACTGGGCCGAATGGTATCTCCTCGCTTTCCTC GAACGCGGTATTCCCGTTGCAGCGTCAGCTTTTCAACGCCAACAACATCA ACAGCGTGAACAGCAGCAGCAGCAACAGAGGCAACAGCAGCAGCAACAGC AATCCCAGCAGCAACAGCACCTCCTTCTTTTTCAACGCCTCCCCACCGGG GTTGCCCTACGGCTGCAGCTGCTGTTGGACTTAGCCCTGCTTGACGTTAC CTCCCTCCACTTCTATCCCTCCATGCTGGCAGCCGCCGGGCTCTATCTCC TCCTCCCCCACAGTTTTCACCCCGCGCTGGCCTTCGCGACGGGCTACCAA CCCGGAGACCGTGCGCTCAAGCACTGTAAGGCCTACCTCACCTTCCTCTC AACAGGTCTGTTCGACGCTCTCCCCCCCCTTCACGACCAACAGCACCAAC ACCAATCTTTTTGGACGACGGTAGTCTCCCCCCGGGCTCAAGCCGCGCAG GTCTTGGTGCCGATGTGGGACAGACACAGTCTTCAAAACCACCCGGCTAA CCTCCTCCCCCACCTTCTCGGGCGCATCACGGCCATCTCTGGTCACGGCG ATGATACCAATTTGTGTAAAAACAGCGACTGCAATATCAAGAGCGGCGAT GATGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATGTTCGTCGCTGC TGCCGTGGCTGCTAATGCCTCTGCTGCAGCTGCTGTCGCTGCTGCTGTAT TGGTACCACCCTCTCCCCCATCGACGACGCTGCCTCCGCCTTCGTTTTTA GGATACCGCTCTGTTTTTTCAGGGAATTCACTAATGAAAGAAAAGGAGGA CGAGGACGAGGAAGGGATGGATTTTTCGGTAGATGGCGAGGATGAGGAAG AGGAAGGGACTGAGGGAGAAGAGGAGGAGGAAGGGGAAGAGGAGGATACG GAAGCGAATGAGGGGGAAGTGAACGAGGAAGACTTCTTCGGGCATTCTCT GGAGCTGCACGATGACTGGGGCTACACAACCAAGAAGAATATTTGTGAGA GGGTTGAGAAGCAGGGAAGGAGGGAGGGAGAGGATTACAGCTGTGACCAT GTTTTGCGGCTTGAGGAGCTGGGAGGGGACGGGAGTGAGAATGAGCTTGG GTGGAGCATGGCTACTACCATGGATCCACAGACGACTCGAGACTCGATCG TGAGTTTTTTTTCCGTCGGAGGAGAAGGAGAAGGGTGAGGATCGGGTTGA GGTTGACGGTTGGATGGAGAGAGAGGAGAGACGGCTGGAGAATGAGAAGG AGGAAGAGGAGGACGAGGACAATGACATGCGTGGAAAGCCATGGAACGAT GGGACCTCGTCGCCGTGTTTGGCTTCCTTCTTCTTCCCTCATGACGTGGT ATCTTCTTCTTGACGACGAACACGGTGTGGACGAGGCCGACGGAAAGGTA AAATCATAGAACAAAACTGATGTTTAGCAATAGGCTTCATTTTTAGGTAG ACTTAGCTTATTAGTGTGGATAGAGACTCTGGCAAAGGAAAGAAACGTGC TGGTTGAAGAGGCTGGAAGTAAGAGCAGGATCAGGAAGGGAAGATATGTC GCCGTGGATTTGTGTCTCTAGCCATGCCAGCACGGGCAAAGAACAAAATT TACAAAAGTTAGAAGTAGGACGAATGTCAAGAACGAGACGATAAAACAAA GATTGACTCAGGTACCTGCGAAACATTTCTCTCTTCAGACGGTAAACAAA TCAAAACGGTTGAAAAGAAATGAATAAGACAAACAAACCAT back to topprotein sequence of jgi.p|Nanoce1779_2|545243 >mRNA_7481-protein ID=mRNA_7481-protein|Name=jgi.p|Nanoce1779_2|545243|organism=Nannochloropsis oceanica|type=polypeptide|length=682bp MEQASMDCLGTDCRARRFHSALDGGSSSSSSSSSSSNSSSNSSDVHHEQR HHYQTHKSWETCGDSTLAAACDETLDEEELETFAICTVPIPCSSSSSRYS YRATTTMITSNHQPCRSAYYQKIGLALPPEVTLHNMKHYGRRHFLKLREA EVQNAPDPTYEHRQIELRPDMRAQLLDWLMEVSANFFVRRRTFQAAVNYC DRFLSTVAVVFPKEKLQLLAITSLFVSSKMEEVYPAKAQELAEATAGAFT ACDIVTFEIELMTSLAWNLTPPTSDDWAEWYLLAFLERGIPVAASAFQRQ QHQQREQQQQQQRQQQQQQQSQQQQHLLLFQRLPTGVALRLQLLLDLALL DVTSLHFYPSMLAAAGLYLLLPHSFHPALAFATGYQPGDRALKHCKAYLT FLSTGLFDALPPLHDQQHQHQSFWTTVVSPRAQAAQVLVPMWDRHSLQNH PANLLPHLLGRITAISGHGDDTNLCKNSDCNIKSGDDGSSSSSSSSSSMF VAAAVAANASAAAAVAAAVLVPPSPPSTTLPPPSFLGYRSVFSGNSLMKE KEDEDEEGMDFSVDGEDEEEEGTEGEEEEEGEEEDTEANEGEVNEEDFFG HSLELHDDWGYTTKKNICERVEKQGRREGEDYSCDHVLRLEELGGDGSEN ELGWSMATTMDPQTTRDSIVSFFSVGGEGEG* back to topmRNA from alignment at scaffold_20:68184..70994- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7481 ID=mRNA_7481|Name=jgi.p|Nanoce1779_2|545243|organism=Nannochloropsis oceanica|type=mRNA|length=2811bp|location=Sequence derived from alignment at scaffold_20:68184..70994- (Nannochloropsis oceanica) AGGGACGGTCAGAAAAGTGCCTCAGGGGCTTCGAACAAGGCGCCTGGATC
ATGCATCAAGGACCCCCGCAGGGGCAGACTAGTGATTAGACGGCGACAGA
GAACGGCGACGACGGGCTTCAGTCACACCCACGCACATCGGAATGGTAAG
TTAGGCGCGGTTGAAAGGTATGTAATTGAAGTAAAGTTCATGACGGCATT
TCTCTTTCCTTACAGGAGCAAGCAAGCATGGACTGTCTTGGCACCGACTG
CAGGGCACGGCGTTTTCACTCCGCCCTGGACGGAGGCAGCAGCAGTAGCA
GTAGCAGTAGCAGTAGCAGTAACAGTAGCAGCAACAGCAGTGATGTCCAC
CACGAGCAGCGTCACCATTACCAGACCCACAAGTCTTGGGAAACGTGCGG
GGACAGCACGCTGGCGGCCGCATGCGACGAGACGCTTGACGAGGAGGAGC
TCGAAACCTTTGCCATCTGTACCGTCCCCATCCCCTGCAGCAGTAGCAGC
AGCAGGTACAGCTACAGAGCCACAACGACGATGATAACAAGCAATCACCA
ACCCTGTCGCAGCGCCTACTACCAAAAAATCGGCCTGGCTCTTCCCCCTG
AGGTAACACTGCACAACATGAAGCACTACGGACGTCGGCACTTTCTGAAA
TTGCGCGAGGCCGAAGTACAAAATGCTCCCGACCCCACGTACGAACATCG
GCAGATAGAACTTCGCCCCGACATGCGTGCCCAGCTCCTGGACTGGCTCA
TGGAAGTAAGTGCCAATTTCTTCGTCCGTCGCCGTACCTTTCAAGCAGCC
GTCAACTACTGCGATCGGTTCCTGTCAACCGTTGCCGTTGTCTTTCCCAA
GGAGAAGCTGCAGCTGCTGGCAATTACCTCCCTCTTTGTATCCTCAAAAA
TGGAAGAAGTTTACCCAGCCAAAGCCCAAGAACTCGCCGAAGCCACCGCC
GGGGCATTCACCGCCTGCGATATCGTTACATTTGAGATTGAGCTGATGAC
AAGCCTAGCCTGGAATCTCACCCCCCCAACGTCCGACGACTGGGCCGAAT
GGTATCTCCTCGCTTTCCTCGAACGCGGTATTCCCGTTGCAGCGTCAGCT
TTTCAACGCCAACAACATCAACAGCGTGAACAGCAGCAGCAGCAACAGAG
GCAACAGCAGCAGCAACAGCAATCCCAGCAGCAACAGCACCTCCTTCTTT
TTCAACGCCTCCCCACCGGGGTTGCCCTACGGCTGCAGCTGCTGTTGGAC
TTAGCCCTGCTTGACGTTACCTCCCTCCACTTCTATCCCTCCATGCTGGC
AGCCGCCGGGCTCTATCTCCTCCTCCCCCACAGTTTTCACCCCGCGCTGG
CCTTCGCGACGGGCTACCAACCCGGAGACCGTGCGCTCAAGCACTGTAAG
GCCTACCTCACCTTCCTCTCAACAGGTCTGTTCGACGCTCTCCCCCCCCT
TCACGACCAACAGCACCAACACCAATCTTTTTGGACGACGGTAGTCTCCC
CCCGGGCTCAAGCCGCGCAGGTCTTGGTGCCGATGTGGGACAGACACAGT
CTTCAAAACCACCCGGCTAACCTCCTCCCCCACCTTCTCGGGCGCATCAC
GGCCATCTCTGGTCACGGCGATGATACCAATTTGTGTAAAAACAGCGACT
GCAATATCAAGAGCGGCGATGATGGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCATGTTCGTCGCTGCTGCCGTGGCTGCTAATGCCTCTGCTGCAGC
TGCTGTCGCTGCTGCTGTATTGGTACCACCCTCTCCCCCATCGACGACGC
TGCCTCCGCCTTCGTTTTTAGGATACCGCTCTGTTTTTTCAGGGAATTCA
CTAATGAAAGAAAAGGAGGACGAGGACGAGGAAGGGATGGATTTTTCGGT
AGATGGCGAGGATGAGGAAGAGGAAGGGACTGAGGGAGAAGAGGAGGAGG
AAGGGGAAGAGGAGGATACGGAAGCGAATGAGGGGGAAGTGAACGAGGAA
GACTTCTTCGGGCATTCTCTGGAGCTGCACGATGACTGGGGCTACACAAC
CAAGAAGAATATTTGTGAGAGGGTTGAGAAGCAGGGAAGGAGGGAGGGAG
AGGATTACAGCTGTGACCATGTTTTGCGGCTTGAGGAGCTGGGAGGGGAC
GGGAGTGAGAATGAGCTTGGGTGGAGCATGGCTACTACCATGGATCCACA
GACGACTCGAGACTCGATCGTGAGTTTTTTTTCCGTCGGAGGAGAAGGAG
AAGGGTGAGGATCGGGTTGAGGTTGACGGTTGGATGGAGAGAGAGGAGAG
ACGGCTGGAGAATGAGAAGGAGGAAGAGGAGGACGAGGACAATGACATGC
GTGGAAAGCCATGGAACGATGGGACCTCGTCGCCGTGTTTGGCTTCCTTC
TTCTTCCCTCATGACGTGGTATCTTCTTCTTGACGACGAACACGGTGTGG
ACGAGGCCGACGGAAAGGTAAAATCATAGAACAAAACTGATGTTTAGCAA
TAGGCTTCATTTTTAGGTAGACTTAGCTTATTAGTGTGGATAGAGACTCT
GGCAAAGGAAAGAAACGTGCTGGTTGAAGAGGCTGGAAGTAAGAGCAGGA
TCAGGAAGGGAAGATATGTCGCCGTGGATTTGTGTCTCTAGCCATGCCAG
CACGGGCAAAGAACAAAATTTACAAAAGTTAGAAGTAGGACGAATGTCAA
GAACGAGACGATAAAACAAAGATTGACTCAGGTACCTGCGAAACATTTCT
CTCTTCAGACGGTAAACAAATCAAAACGGTTGAAAAGAAATGAATAAGAC
AAACAAACCAT back to topCoding sequence (CDS) from alignment at scaffold_20:68184..70994- >mRNA_7481 ID=mRNA_7481|Name=jgi.p|Nanoce1779_2|545243|organism=Nannochloropsis oceanica|type=CDS|length=4092bp|location=Sequence derived from alignment at scaffold_20:68184..70994- (Nannochloropsis oceanica) GAGCAAGCAAGCATGGACTGTCTTGGCACCGACTGCAGGGCACGGCGTTT TCACTCCGCCCTGGACGGAGGCAGCAGCAGTAGCAGTAGCAGTAGCAGTA GCAGTAACAGTAGCAGCAACAGCAGTGATGTCCACCACGAGCAGCGTCAC CATTACCAGACCCACAAGTCTTGGGAAACGTGCGGGGACAGCACGCTGGC GGCCGCATGCGACGAGACGCTTGACGAGGAGGAGCTCGAAACCTTTGCCA TCTGTACCGTCCCCATCCCCTGCAGCAGTAGCAGCAGCAGGTACAGCTAC AGAGCCACAACGACGATGATAACAAGCAATCACCAACCCTGTCGCAGCGC CTACTACCAAAAAATCGGCCTGGCTCTTCCCCCTGAGGTAACACTGCACA ACATGAAGCACTACGGACGTCGGCACTTTCTGAAATTGCGCGAGGCCGAA GTACAAAATGCTCCCGACCCCACGTACGAACATCGGCAGATAGAACTTCG CCCCGACATGCGTGCCCAGCTCCTGGACTGGCTCATGGAAGTAAGTGCCA ATTTCTTCGTCCGTCGCCGTACCTTTCAAGCAGCCGTCAACTACTGCGAT CGGTTCCTGTCAACCGTTGCCGTTGTCTTTCCCAAGGAGAAGCTGCAGCT GCTGGCAATTACCTCCCTCTTTGTATCCTCAAAAATGGAAGAAGTTTACC CAGCCAAAGCCCAAGAACTCGCCGAAGCCACCGCCGGGGCATTCACCGCC TGCGATATCGTTACATTTGAGATTGAGCTGATGACAAGCCTAGCCTGGAA TCTCACCCCCCCAACGTCCGACGACTGGGCCGAATGGTATCTCCTCGCTT TCCTCGAACGCGGTATTCCCGTTGCAGCGTCAGCTTTTCAACGCCAACAA CATCAACAGCGTGAACAGCAGCAGCAGCAACAGAGGCAACAGCAGCAGCA ACAGCAATCCCAGCAGCAACAGCACCTCCTTCTTTTTCAACGCCTCCCCA CCGGGGTTGCCCTACGGCTGCAGCTGCTGTTGGACTTAGCCCTGCTTGAC GTTACCTCCCTCCACTTCTATCCCTCCATGCTGGCAGCCGCCGGGCTCTA TCTCCTCCTCCCCCACAGTTTTCACCCCGCGCTGGCCTTCGCGACGGGCT ACCAACCCGGAGACCGTGCGCTCAAGCACTGTAAGGCCTACCTCACCTTC CTCTCAACAGGTCTGTTCGACGCTCTCCCCCCCCTTCACGACCAACAGCA CCAACACCAATCTTTTTGGACGACGGTAGTCTCCCCCCGGGCTCAAGCCG CGCAGGTCTTGGTGCCGATGTGGGACAGACACAGTCTTCAAAACCACCCG GCTAACCTCCTCCCCCACCTTCTCGGGCGCATCACGGCCATCTCTGGTCA CGGCGATGATACCAATTTGTGTAAAAACAGCGACTGCAATATCAAGAGCG GCGATGATGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATGTTCGTC GCTGCTGCCGTGGCTGCTAATGCCTCTGCTGCAGCTGCTGTCGCTGCTGC TGTATTGGTACCACCCTCTCCCCCATCGACGACGCTGCCTCCGCCTTCGT TTTTAGGATACCGCTCTGTTTTTTCAGGGAATTCACTAATGAAAGAAAAG GAGGACGAGGACGAGGAAGGGATGGATTTTTCGGTAGATGGCGAGGATGA GGAAGAGGAAGGGACTGAGGGAGAAGAGGAGGAGGAAGGGGAAGAGGAGG ATACGGAAGCGAATGAGGGGGAAGTGAACGAGGAAGACTTCTTCGGGCAT TCTCTGGAGCTGCACGATGACTGGGGCTACACAACCAAGAAGAATATTTG TGAGAGGGTTGAGAAGCAGGGAAGGAGGGAGGGAGAGGATTACAGCTGTG ACCATGTTTTGCGGCTTGAGGAGCTGGGAGGGGACGGGAGTGAGAATGAG CTTGGGTGGAGCATGGCTACTACCATGGATCCACAGACGACTCGAGACTC GATCGTGAGTTTTTTTTCCGTCGGAGGAGAAGGAGAAGGGTGAATGGAGC AAGCAAGCATGGACTGTCTTGGCACCGACTGCAGGGCACGGCGTTTTCAC TCCGCCCTGGACGGAGGCAGCAGCAGTAGCAGTAGCAGTAGCAGTAGCAG TAACAGTAGCAGCAACAGCAGTGATGTCCACCACGAGCAGCGTCACCATT ACCAGACCCACAAGTCTTGGGAAACGTGCGGGGACAGCACGCTGGCGGCC GCATGCGACGAGACGCTTGACGAGGAGGAGCTCGAAACCTTTGCCATCTG TACCGTCCCCATCCCCTGCAGCAGTAGCAGCAGCAGGTACAGCTACAGAG CCACAACGACGATGATAACAAGCAATCACCAACCCTGTCGCAGCGCCTAC TACCAAAAAATCGGCCTGGCTCTTCCCCCTGAGGTAACACTGCACAACAT GAAGCACTACGGACGTCGGCACTTTCTGAAATTGCGCGAGGCCGAAGTAC AAAATGCTCCCGACCCCACGTACGAACATCGGCAGATAGAACTTCGCCCC GACATGCGTGCCCAGCTCCTGGACTGGCTCATGGAAGTAAGTGCCAATTT CTTCGTCCGTCGCCGTACCTTTCAAGCAGCCGTCAACTACTGCGATCGGT TCCTGTCAACCGTTGCCGTTGTCTTTCCCAAGGAGAAGCTGCAGCTGCTG GCAATTACCTCCCTCTTTGTATCCTCAAAAATGGAAGAAGTTTACCCAGC CAAAGCCCAAGAACTCGCCGAAGCCACCGCCGGGGCATTCACCGCCTGCG ATATCGTTACATTTGAGATTGAGCTGATGACAAGCCTAGCCTGGAATCTC ACCCCCCCAACGTCCGACGACTGGGCCGAATGGTATCTCCTCGCTTTCCT CGAACGCGGTATTCCCGTTGCAGCGTCAGCTTTTCAACGCCAACAACATC AACAGCGTGAACAGCAGCAGCAGCAACAGAGGCAACAGCAGCAGCAACAG CAATCCCAGCAGCAACAGCACCTCCTTCTTTTTCAACGCCTCCCCACCGG GGTTGCCCTACGGCTGCAGCTGCTGTTGGACTTAGCCCTGCTTGACGTTA CCTCCCTCCACTTCTATCCCTCCATGCTGGCAGCCGCCGGGCTCTATCTC CTCCTCCCCCACAGTTTTCACCCCGCGCTGGCCTTCGCGACGGGCTACCA ACCCGGAGACCGTGCGCTCAAGCACTGTAAGGCCTACCTCACCTTCCTCT CAACAGGTCTGTTCGACGCTCTCCCCCCCCTTCACGACCAACAGCACCAA CACCAATCTTTTTGGACGACGGTAGTCTCCCCCCGGGCTCAAGCCGCGCA GGTCTTGGTGCCGATGTGGGACAGACACAGTCTTCAAAACCACCCGGCTA ACCTCCTCCCCCACCTTCTCGGGCGCATCACGGCCATCTCTGGTCACGGC GATGATACCAATTTGTGTAAAAACAGCGACTGCAATATCAAGAGCGGCGA TGATGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCATGTTCGTCGCTG CTGCCGTGGCTGCTAATGCCTCTGCTGCAGCTGCTGTCGCTGCTGCTGTA TTGGTACCACCCTCTCCCCCATCGACGACGCTGCCTCCGCCTTCGTTTTT AGGATACCGCTCTGTTTTTTCAGGGAATTCACTAATGAAAGAAAAGGAGG ACGAGGACGAGGAAGGGATGGATTTTTCGGTAGATGGCGAGGATGAGGAA GAGGAAGGGACTGAGGGAGAAGAGGAGGAGGAAGGGGAAGAGGAGGATAC GGAAGCGAATGAGGGGGAAGTGAACGAGGAAGACTTCTTCGGGCATTCTC TGGAGCTGCACGATGACTGGGGCTACACAACCAAGAAGAATATTTGTGAG AGGGTTGAGAAGCAGGGAAGGAGGGAGGGAGAGGATTACAGCTGTGACCA TGTTTTGCGGCTTGAGGAGCTGGGAGGGGACGGGAGTGAGAATGAGCTTG GGTGGAGCATGGCTACTACCATGGATCCACAGACGACTCGAGACTCGATC GTGAGTTTTTTTTCCGTCGGAGGAGAAGGAGAAGGGTGAATG back to top
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