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Properties
| Property Name | Value |
|---|
| TranscriptId | 574091 |
| Track | FilteredModels2 |
| ProteinId | 574005 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:348764..350883 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_748 ID=mRNA_748|Name=jgi.p|Nanoce1779_2|574005|organism=Nannochloropsis oceanica|type=mRNA|length=1330bp
CGTGAAAACCAGAGACCCCTCACGTGGTAATGGTATGCCCTGTATGGCTC
AGTCTTAATGTCGTGTCATTACGTGCAACTAGTGGTTGTCAATAATGTCC
TCCATAGATGTTATCATAGTTTACCTCACAATAAATAGTGTCGATGTTTT
TCTCTCACTGGCGGCCACCAGCCGGTTGCCAGGCCACACACACCTCTACG
CAAAAAACATAACCAAAGCTGCACAAAGGCAGCGCTGTAGCATACACACC
TCGTCCTCGAATGCCAGGGCGCTCGTCTTTATCTCTTTCAGGATAGGTGC
AATAATTATTATCACATTGTATAATTATATGTTAAATTAATACGCTCCGT
AATGAAGGAAGGTCAATCAGGACTACCTCCTCCCTCAACCCACACACTAC
ACCCCACACAGCGCAGCGGTCATTGCCATCATCACGACCATCAAAAGGGT
TGGGAATATGAAGGGAAAACAGATGCGACGCCGACGTGCAGATAGCTCTG
ATGAGGAGGAAGGGGGAAACGACCCAGGCATCAAGCAGAAGACGTTGATA
GAGCTACGGGAGGAACAGAGGCAGCGTAAGGCCAAGCTGGGCATCCAAGC
GGCGTGCACTTTCGACACAGAAGATGGAGGAGGGTATGCCGGTAAGAAGA
AAGGCTCGACGACAGAGGAGGAGGATGAGGAGGAAGCCGAGCGGCAACGG
AGCATTGGCGAGATGATGGAATCCAGTTTTACGGGTATGAAGTACGTCAA
GAAGGACGAAATGAGCGTGCACGAGCGCATCATGGAGCAGTACATAAACG
AGAAGCTCGGCGGGACCAAGAGTGAGGCGCCCGAAGCTGTCCGAGATGAC
CTGCCCTTATCCAAGTCGACGCGTCGGGACAAACTTTTGGCAATCACCGA
GGAGGTGAATGCGCAAGGTCGCGGGCCTGTTCACAGCAAGGGAGGGTACG
CCAATGACGACGGCGGGGTTGGGGAGGGGGCTCCCATTGCATTCAGCACG
GGGATCGCTGAAGTATCATTGCCCATGGAGTTTAAGTTGCGGAATATCGA
GGCCACAGAATTCGCTCGGCAGCAACGGGAAGAGCAGCACTTACTCCGGC
AGCAGCAGGGCGGGGGGAAGGAAGAAGACATCATCGGCAACGTGACGTAT
AACTACAATGCCCATAGGAAAGACTACGCAATCAGCATGCGGGCGCGAGA
TCCTAAACCAAAGGCTCCTTTCAAGCGTGGGGATGGCGAAGGGCCTAAGG
GCCGGGATACTATGTCAGATGATCAGGTGTACGCCAAATTTAAGAAAAGG
AAATATTAAATGTGCAAAATTAATCAAAAT back to topprotein sequence of jgi.p|Nanoce1779_2|574005 >mRNA_748-protein ID=mRNA_748-protein|Name=jgi.p|Nanoce1779_2|574005|organism=Nannochloropsis oceanica|type=polypeptide|length=284bp
MKGKQMRRRRADSSDEEEGGNDPGIKQKTLIELREEQRQRKAKLGIQAAC
TFDTEDGGGYAGKKKGSTTEEEDEEEAERQRSIGEMMESSFTGMKYVKKD
EMSVHERIMEQYINEKLGGTKSEAPEAVRDDLPLSKSTRRDKLLAITEEV
NAQGRGPVHSKGGYANDDGGVGEGAPIAFSTGIAEVSLPMEFKLRNIEAT
EFARQQREEQHLLRQQQGGGKEEDIIGNVTYNYNAHRKDYAISMRARDPK
PKAPFKRGDGEGPKGRDTMSDDQVYAKFKKRKY* back to topmRNA from alignment at scaffold_2:348764..350883- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_748 ID=mRNA_748|Name=jgi.p|Nanoce1779_2|574005|organism=Nannochloropsis oceanica|type=mRNA|length=2120bp|location=Sequence derived from alignment at scaffold_2:348764..350883- (Nannochloropsis oceanica)
CGTGAAAACCAGAGACCCCTCACGTGGTAATGGTATGCCCTGTATGGCTC
AGTCTTAATGTCGTGTCATTACGTGCAACTAGTGGTTGTCAATAATGTCC
TCCATAGATGTTATCATAGTTTACCTCACAATAAATAGTGTCGATGTTTT
TCTCTCACTGGCGGCCACCAGCCGGTTGCCAGGCCACACACACCTCTACG
CAAAAAACATAACCAAAGCTGCACAAAGGCAGCGCTGTAGCATACACACC
TCGTCCTCGAATGCCAGGGCGCTCGTCTTTATCTCTTTCAGGATAGGTGC
AATAATTATTATCACATTGTATAATTATATGTTAAATTAATACGCTCCGT
AATGAAGGAAGGTCAATCAGGACTACCTCCTCCCTCAACCCACACACTAC
ACCCCACACAGCGCAGCGGTCATTGCCATCATCACGACCATCAAAAGGGT
TGGGAATATGAAGGGAAAACAGATGCGACGCCGACGTGCAGGTAAGGCGC
CATCTAAGGTCATGATAATTATCATCATCTGACGGGTTCACAGGGGTAGG
AGAGTCACCTTGTCCGTCTGTGTGTGATTTGGTCTTGCTTCACCCCACAC
CCAGGCCTCCATTTGTATACGCAACACTTACACTTCTCTCATGCACCGTA
AATCAAAATCACAGATAGCTCTGATGAGGAGGAAGGGGGAAACGACCCAG
GCATCAAGCAGAAGACGTTGATAGAGGTATGTGTGAGGGTGGGGTTTGGG
CGGTGATGCGACTCTTTGGTATCGAAACCAGCTGCCTGGTTGCGCCAGAT
ATCTATATTGCATGCTTGTCTGTTTGTCACACTGAGGGCTTTTGAACAAG
CTCGCCTGCGTGTGGAGTGCATCGACTATATCTACATTCGCGCGCACTCA
CGCTCCCTTGCACACATTCTCAACCCAGCTACGGGAGGAACAGAGGCAGC
GTAAGGCCAAGCTGGGCATCCAAGCGGCGTGCACTTTCGACACAGAAGAT
GGAGGAGGGTATGCCGGTAAGAAGAAAGGCTCGACGACAGAGGAGGAGGA
TGAGGAGGAAGCCGAGCGGCAACGGAGCATTGGCGAGGTGAGAAGGGATG
CGGGAATGCAGGAGGATGGAGAATTGGATTACGAATGAAATGTCTCTGAG
ACATTTGGGGATTCGTTTTGACTGTGACTTGGGGCTAGGAGGGCGAGAGC
TGCTGACATTTCTCTTTATTTTCCATATTGATTTGGTAGAAAGCGCCCCT
GTCCACTCGACGCGAAGGCTTTCCGGAAATGACACACTTGTACACACATT
CCTTCACTTACCCTTAGATGATGGAATCCAGTTTTACGGGTATGAAGTAC
GTCAAGAAGGACGAAATGAGCGTGCACGAGCGCATCATGGAGCAGTACAT
AAACGAGAAGCTCGGCGGGACCAAGAGTGAGGCGCCCGAAGGTAATTTGT
GGTGATAGTATGGTTTTGTTTACATAAGAACATGTATTCTTACGTCATAG
CAGTAGTAGACCAAATTAAGAGCTAGCAGGTGAACAGCCATTGCCTCCTG
TTATTCCCCTCTCCCCCACTCCCCCCCCCCAAATACTGACGTGTACACAT
ACATACATACAATTACATACATACAGCTGTCCGAGATGACCTGCCCTTAT
CCAAGTCGACGCGTCGGGACAAACTTTTGGCAATCACCGAGGAGGTGAAT
GCGCAAGGTCGCGGGCCTGTTCACAGCAAGGGAGGGTACGCCAATGACGA
CGGCGGGGTTGGGGAGGGGGCTCCCATTGCATTCAGCACGGGGATCGCTG
AAGTATCATTGCCCATGGAGTTTAAGTTGCGGAATATCGAGGCCACAGAA
TTCGCTCGGCAGCAACGGGAAGAGCAGCACTTACTCCGGCAGCAGCAGGG
CGGGGGGAAGGAAGAAGACATCATCGGCAACGTGACGTATAACTACAATG
CCCATAGGAAAGACTACGCAATCAGCATGCGGGCGCGAGATCCTAAACCA
AAGGCTCCTTTCAAGCGTGGGGATGGCGAAGGGCCTAAGGGCCGGGATAC
TATGTCAGATGATCAGGTGTACGCCAAATTTAAGAAAAGGAAATATTAAA
TGTGCAAAATTAATCAAAAT back to topCoding sequence (CDS) from alignment at scaffold_2:348764..350883- >mRNA_748 ID=mRNA_748|Name=jgi.p|Nanoce1779_2|574005|organism=Nannochloropsis oceanica|type=CDS|length=4260bp|location=Sequence derived from alignment at scaffold_2:348764..350883- (Nannochloropsis oceanica)
CTGTCCGAGATGACCTGCCCTTATCCAAGTCGACGCGTCGGGACAAACTT
TTGGCAATCACCGAGGAGGTGAATGCGCAAGGTCGCGGGCCTGTTCACAG
CAAGGGAGGGTACGCCAATGACGACGGCGGGGTTGGGGAGGGGGCTCCCA
TTGCATTCAGCACGGGGATCGCTGAAGTATCATTGCCCATGGAGTTTAAG
TTGCGGAATATCGAGGCCACAGAATTCGCTCGGCAGCAACGGGAAGAGCA
GCACTTACTCCGGCAGCAGCAGGGCGGGGGGAAGGAAGAAGACATCATCG
GCAACGTGACGTATAACTACAATGCCCATAGGAAAGACTACGCAATCAGC
ATGCGGGCGCGAGATCCTAAACCAAAGGCTCCTTTCAAGCGTGGGGATGG
CGAAGGGCCTAAGGGCCGGGATACTATGTCAGATGATCAGGTGTACGCCA
AATTTAAGAAAAGGAAATATTAAATGATGGAATCCAGTTTTACGGGTATG
AAGTACGTCAAGAAGGACGAAATGAGCGTGCACGAGCGCATCATGGAGCA
GTACATAAACGAGAAGCTCGGCGGGACCAAGAGTGAGGCGCCCGAAGCTA
CGGGAGGAACAGAGGCAGCGTAAGGCCAAGCTGGGCATCCAAGCGGCGTG
CACTTTCGACACAGAAGATGGAGGAGGGTATGCCGGTAAGAAGAAAGGCT
CGACGACAGAGGAGGAGGATGAGGAGGAAGCCGAGCGGCAACGGAGCATT
GGCGAGATAGCTCTGATGAGGAGGAAGGGGGAAACGACCCAGGCATCAAG
CAGAAGACGTTGATAGAGATGAAGGGAAAACAGATGCGACGCCGACGTGC
AGCTGTCCGAGATGACCTGCCCTTATCCAAGTCGACGCGTCGGGACAAAC
TTTTGGCAATCACCGAGGAGGTGAATGCGCAAGGTCGCGGGCCTGTTCAC
AGCAAGGGAGGGTACGCCAATGACGACGGCGGGGTTGGGGAGGGGGCTCC
CATTGCATTCAGCACGGGGATCGCTGAAGTATCATTGCCCATGGAGTTTA
AGTTGCGGAATATCGAGGCCACAGAATTCGCTCGGCAGCAACGGGAAGAG
CAGCACTTACTCCGGCAGCAGCAGGGCGGGGGGAAGGAAGAAGACATCAT
CGGCAACGTGACGTATAACTACAATGCCCATAGGAAAGACTACGCAATCA
GCATGCGGGCGCGAGATCCTAAACCAAAGGCTCCTTTCAAGCGTGGGGAT
GGCGAAGGGCCTAAGGGCCGGGATACTATGTCAGATGATCAGGTGTACGC
CAAATTTAAGAAAAGGAAATATTAAATGATGGAATCCAGTTTTACGGGTA
TGAAGTACGTCAAGAAGGACGAAATGAGCGTGCACGAGCGCATCATGGAG
CAGTACATAAACGAGAAGCTCGGCGGGACCAAGAGTGAGGCGCCCGAAGC
TACGGGAGGAACAGAGGCAGCGTAAGGCCAAGCTGGGCATCCAAGCGGCG
TGCACTTTCGACACAGAAGATGGAGGAGGGTATGCCGGTAAGAAGAAAGG
CTCGACGACAGAGGAGGAGGATGAGGAGGAAGCCGAGCGGCAACGGAGCA
TTGGCGAGATAGCTCTGATGAGGAGGAAGGGGGAAACGACCCAGGCATCA
AGCAGAAGACGTTGATAGAGATGAAGGGAAAACAGATGCGACGCCGACGT
GCAGCTGTCCGAGATGACCTGCCCTTATCCAAGTCGACGCGTCGGGACAA
ACTTTTGGCAATCACCGAGGAGGTGAATGCGCAAGGTCGCGGGCCTGTTC
ACAGCAAGGGAGGGTACGCCAATGACGACGGCGGGGTTGGGGAGGGGGCT
CCCATTGCATTCAGCACGGGGATCGCTGAAGTATCATTGCCCATGGAGTT
TAAGTTGCGGAATATCGAGGCCACAGAATTCGCTCGGCAGCAACGGGAAG
AGCAGCACTTACTCCGGCAGCAGCAGGGCGGGGGGAAGGAAGAAGACATC
ATCGGCAACGTGACGTATAACTACAATGCCCATAGGAAAGACTACGCAAT
CAGCATGCGGGCGCGAGATCCTAAACCAAAGGCTCCTTTCAAGCGTGGGG
ATGGCGAAGGGCCTAAGGGCCGGGATACTATGTCAGATGATCAGGTGTAC
GCCAAATTTAAGAAAAGGAAATATTAAATGATGGAATCCAGTTTTACGGG
TATGAAGTACGTCAAGAAGGACGAAATGAGCGTGCACGAGCGCATCATGG
AGCAGTACATAAACGAGAAGCTCGGCGGGACCAAGAGTGAGGCGCCCGAA
GCTACGGGAGGAACAGAGGCAGCGTAAGGCCAAGCTGGGCATCCAAGCGG
CGTGCACTTTCGACACAGAAGATGGAGGAGGGTATGCCGGTAAGAAGAAA
GGCTCGACGACAGAGGAGGAGGATGAGGAGGAAGCCGAGCGGCAACGGAG
CATTGGCGAGATAGCTCTGATGAGGAGGAAGGGGGAAACGACCCAGGCAT
CAAGCAGAAGACGTTGATAGAGATGAAGGGAAAACAGATGCGACGCCGAC
GTGCAGCTGTCCGAGATGACCTGCCCTTATCCAAGTCGACGCGTCGGGAC
AAACTTTTGGCAATCACCGAGGAGGTGAATGCGCAAGGTCGCGGGCCTGT
TCACAGCAAGGGAGGGTACGCCAATGACGACGGCGGGGTTGGGGAGGGGG
CTCCCATTGCATTCAGCACGGGGATCGCTGAAGTATCATTGCCCATGGAG
TTTAAGTTGCGGAATATCGAGGCCACAGAATTCGCTCGGCAGCAACGGGA
AGAGCAGCACTTACTCCGGCAGCAGCAGGGCGGGGGGAAGGAAGAAGACA
TCATCGGCAACGTGACGTATAACTACAATGCCCATAGGAAAGACTACGCA
ATCAGCATGCGGGCGCGAGATCCTAAACCAAAGGCTCCTTTCAAGCGTGG
GGATGGCGAAGGGCCTAAGGGCCGGGATACTATGTCAGATGATCAGGTGT
ACGCCAAATTTAAGAAAAGGAAATATTAAATGATGGAATCCAGTTTTACG
GGTATGAAGTACGTCAAGAAGGACGAAATGAGCGTGCACGAGCGCATCAT
GGAGCAGTACATAAACGAGAAGCTCGGCGGGACCAAGAGTGAGGCGCCCG
AAGCTACGGGAGGAACAGAGGCAGCGTAAGGCCAAGCTGGGCATCCAAGC
GGCGTGCACTTTCGACACAGAAGATGGAGGAGGGTATGCCGGTAAGAAGA
AAGGCTCGACGACAGAGGAGGAGGATGAGGAGGAAGCCGAGCGGCAACGG
AGCATTGGCGAGATAGCTCTGATGAGGAGGAAGGGGGAAACGACCCAGGC
ATCAAGCAGAAGACGTTGATAGAGATGAAGGGAAAACAGATGCGACGCCG
ACGTGCAGCTGTCCGAGATGACCTGCCCTTATCCAAGTCGACGCGTCGGG
ACAAACTTTTGGCAATCACCGAGGAGGTGAATGCGCAAGGTCGCGGGCCT
GTTCACAGCAAGGGAGGGTACGCCAATGACGACGGCGGGGTTGGGGAGGG
GGCTCCCATTGCATTCAGCACGGGGATCGCTGAAGTATCATTGCCCATGG
AGTTTAAGTTGCGGAATATCGAGGCCACAGAATTCGCTCGGCAGCAACGG
GAAGAGCAGCACTTACTCCGGCAGCAGCAGGGCGGGGGGAAGGAAGAAGA
CATCATCGGCAACGTGACGTATAACTACAATGCCCATAGGAAAGACTACG
CAATCAGCATGCGGGCGCGAGATCCTAAACCAAAGGCTCCTTTCAAGCGT
GGGGATGGCGAAGGGCCTAAGGGCCGGGATACTATGTCAGATGATCAGGT
GTACGCCAAATTTAAGAAAAGGAAATATTAAATGATGGAATCCAGTTTTA
CGGGTATGAAGTACGTCAAGAAGGACGAAATGAGCGTGCACGAGCGCATC
ATGGAGCAGTACATAAACGAGAAGCTCGGCGGGACCAAGAGTGAGGCGCC
CGAAGCTACGGGAGGAACAGAGGCAGCGTAAGGCCAAGCTGGGCATCCAA
GCGGCGTGCACTTTCGACACAGAAGATGGAGGAGGGTATGCCGGTAAGAA
GAAAGGCTCGACGACAGAGGAGGAGGATGAGGAGGAAGCCGAGCGGCAAC
GGAGCATTGGCGAGATAGCTCTGATGAGGAGGAAGGGGGAAACGACCCAG
GCATCAAGCAGAAGACGTTGATAGAGATGAAGGGAAAACAGATGCGACGC
CGACGTGCAG back to top
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