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Properties
Property Name | Value |
TranscriptId | 641247 |
Track | FilteredModels2 |
ProteinId | 641161 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_20 | supercontig | scaffold_20:38733..40797 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7468 ID=mRNA_7468|Name=jgi.p|Nanoce1779_2|641161|organism=Nannochloropsis oceanica|type=mRNA|length=1314bp ATGACAGTGGCTTTCTACTGCCACGATTGCATTGCCGAGCTCCAGCATCA ATTTTTGTCGTTGTCGGATTGTCAGCCCCGCGAGACGTTAAAATACGTAG TAAAGGAAAATATGGCTCCATCTTCTGCCTCCAACAAGACGCCGTCTCAC GACGAGGATCCCATTCGAAAACAGCTCAAAATCCTGTCTCCTCTGCCGCA TGTGCCTTGGGACCACCCCCCGCCTTTAGCCACGGGCGCCGGTAAGGGTA ACAGCCCTGCTTCTTCCCGCCACCGCTACGGAAACCAAGCTGGTAACGAC CGTAGCAGTGACGGCGTCTATCGCCGGACCCGCGCACGTAGCCAGAAGCG TATTTCATTTGGTGATGGCAGCAGCTTTTCTTCCCATCAGCAGCAGCAGG AGGAGGAGGAGGAGGATCGAGTGCGGCAGAAGGTGGGGAAGCAGCAGCGA CGGACAGGGATGCCGGCTTACATGTATTTGTCTCGGTACGATGCCCCTTC TTACCTGGTGGGTAACCCTTACATTCACGGAGGGTACCGTGCCTGCCGAA CACTGCGGGAAAGTTGTCAAGGCTTGTTTTACTACCATAATTCTTGGTTG GACACCTGGACGAGCTGCTTTTCCTGGATCCACGCTCATGTGTTGCTGGC TGTGGCTGTGTGGAGATATGGCGCGTTTGACCAGGATTGGTTGAGTGCAT TTGTGTTCGGGTTATTTTATGTGCACGTGGCGTGGGTGCATGCCCCTGCC AGCATTGTGTGTCACTTGGTGGGGAACGCCGGCATCTCCCAGCACGTGTA CGAGCTGTGCTTGGAGATTGATTACCTGGGCATCTTTTCCGCGTCGGTGA TCCTGTCTTTCACTCAAGCTGTATTTGTGTACCCCGCGTGGGCGACATGC GTGAATGTGGCCATGGCCCTGAGCCTGACCGCCTACCTGATCGCCCACCT CCGTCAGGTCGTGGTGTGTCATATTGGCCGCCTACGTATGCTCCTAGAGA TCGGAAGCCTCTACCAATTTCCTCTGTGGTACCAAGCCTACCTCGACTGC GCCTCGTCCTCGCCCTCCCTCCCGCCCACCCTGGCTTCCTCCCTCCATCC CTCCTTGCCAATCTCCCTGCTATGTGCGGTTGGGACGACGGGATCTTTGG TGATGGGGGGCCTGACGTATGCTCTCCATTTCCCCGAATGCTTCGCGCCC GGAAAATTCGATGTCTGGTGGAATTCCCACGCTGTGATGCACGTCTGGAT TAATGTGGCCATGTTCTCGGAGTTCGCCTTCCTTGTCCACATGCTTACCC GCCGCCACGCCTAG back to topprotein sequence of jgi.p|Nanoce1779_2|641161 >mRNA_7468-protein ID=mRNA_7468-protein|Name=jgi.p|Nanoce1779_2|641161|organism=Nannochloropsis oceanica|type=polypeptide|length=438bp MTVAFYCHDCIAELQHQFLSLSDCQPRETLKYVVKENMAPSSASNKTPSH DEDPIRKQLKILSPLPHVPWDHPPPLATGAGKGNSPASSRHRYGNQAGND RSSDGVYRRTRARSQKRISFGDGSSFSSHQQQQEEEEEDRVRQKVGKQQR RTGMPAYMYLSRYDAPSYLVGNPYIHGGYRACRTLRESCQGLFYYHNSWL DTWTSCFSWIHAHVLLAVAVWRYGAFDQDWLSAFVFGLFYVHVAWVHAPA SIVCHLVGNAGISQHVYELCLEIDYLGIFSASVILSFTQAVFVYPAWATC VNVAMALSLTAYLIAHLRQVVVCHIGRLRMLLEIGSLYQFPLWYQAYLDC ASSSPSLPPTLASSLHPSLPISLLCAVGTTGSLVMGGLTYALHFPECFAP GKFDVWWNSHAVMHVWINVAMFSEFAFLVHMLTRRHA* back to topmRNA from alignment at scaffold_20:38733..40797+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7468 ID=mRNA_7468|Name=jgi.p|Nanoce1779_2|641161|organism=Nannochloropsis oceanica|type=mRNA|length=2065bp|location=Sequence derived from alignment at scaffold_20:38733..40797+ (Nannochloropsis oceanica) ATGACAGTGGCTTTCTACTGCCACGATTGCATTGCCGAGCTCCAGCATCA
ATTTTTGTCGTTGTCGGATTGTCAGCCCCGCGAGACGTTGTGCACTTTTT
GACACGTTCCATGCTCTCCCTCACAACTCCCACCTCACGATCGACACACA
GAAAATACGTAGTAAAGGAAAATATGGCTCCATCTTCTGCCTCCAACAAG
ACGCCGTCTCACGACGAGGATCCCATTCGAAAACAGCTCAAAATCCTGTC
TCCTCTGCCGCATGTGCCTTGGGACCACCCCCCGCCTTTAGCCACGGGCG
CCGGTAAGGGTAACAGCCCTGCTTCTTCCCGCCACCGCTACGGAAACCAA
GCTGGTAACGACCGTAGCAGTGACGGCGTCTATCGCCGGACCCGCGCACG
TAGCCAGAAGCGTATTTCATTTGGTGATGGCAGCAGCTTTTCTTCCCATC
AGCAGCAGCAGGAGGAGGAGGAGGAGGATCGAGTGCGGCAGAAGGTGGGG
AAGCAGCAGCGACGGACAGGGATGCCGGCTTACATGTATTTGTCTCGGTA
CGATGCCCCTTCTTACCTGGTGGGTAACCCTTACATTCACGGAGGGTACC
GTGCCTGCCGAACACTGCGGGAAAGTTGTCAAGGCTTGTTTTACTACCAT
AATTCTTGGTTGGACACCTGGACGAGCTGCTTTTCCTGGATCCACGCTCA
TGTGTTGCTGGCTGTGGCTGTGTGGAGATATGGCGCGTTTGACCAGGATT
GGTTGAGTGCATTTGTGTTCGGGTTATTTTATGTGCACGTGGCGTGGGTG
CATGCCCCTGCCAGCATTGTGTGTCACTTGGTGAGGAGAAGGGAGGGAGG
GAGGGAGGGGGCAAGATGACTCGCGCATGGTAGTGTAAGGATCGATGCGA
ACCATTATTGCACGTGTCTTCATTCCTCTCCCTCTCGCTCTCTCTCCCTC
CCTTCCTCCCTCCGCTCTACCACCGACCTCTACTCTGTGTAGGTGGGGAA
CGCCGGCATCTCCCAGCACGTGTACGAGCTGTGCTTGGAGATTGATTACC
TGGGCATCTTTTCCGCGTCGGTGATCCTGTCTTTCACTCAAGCTGTATTT
GTGTACCCCGCGTGGGCGACATGCGTGAATGTGGCCATGGCCCTGAGCCT
GACCGCCTACCTGGTGAGCAGCCTGTGGGAGGGAGGGAGGGAAAGATGCA
GATACTTTCTTTAATCACTTCCCTACCATCTATGACGAATTTCGGGTGTT
TGCCTCTTTCCATCCCTCCCTCGGATCACCCACTTTCTCGTAACACACGT
CACATTTCCCATGCACACGTCACATTTCCCAAGGGGTGCTCACCAGTACC
CCTCGCACTCCCCCCCCCCCCTCATTCCCTCCTTCCTTGTCCCCCCCCCC
CCCCGTGCTTCCTTCTCCCCCCCCCTCGTCCCCGTCCTCAGATCGCCCAC
CTCCGTCAGGTCGTGGTGTGTCATATTGGCCGCCTACGTATGCTCCTAGA
GATCGGAAGCCTCTACCAATTTCCTCTGTGGTACCAAGCCTACCTCGACT
GCGCCTCGTCCTCGCCCTCCCTCCCGCCCACCCTGGCTTCCTCCCTCCAT
CCCTCCTTGCCAATCTCCCTGCTATGTGCGGTTGGGACGACGGGATCTTT
GGTGATGGGGGGCCTGACGTATGCTCTCCATTTCCCCGAATGCTTCGCGC
CCGGAAAATTCGATGTCTGGGTGCGTCCTTCCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCCCCCTCCCTCCCTCCTTTTTTGGGGG
GGTTTATAGGTTGTCATCCCCTCCCCCTCTCTCTCTTCAGCGTGTCAGTT
CCTCCATGTAAAAAAATGTGCATGAACCACTATATTCTCCCTATCGAAAT
CACACCCGTACTTATACATCATATTGATTCCTTTAATCTCCACACGCATC
CACACACATACATATACAGTGGAATTCCCACGCTGTGATGCACGTCTGGA
TTAATGTGGCCATGTTCTCGGAGTTCGCCTTCCTTGTCCACATGCTTACC
CGCCGCCACGCCTAG back to topCoding sequence (CDS) from alignment at scaffold_20:38733..40797+ >mRNA_7468 ID=mRNA_7468|Name=jgi.p|Nanoce1779_2|641161|organism=Nannochloropsis oceanica|type=CDS|length=6570bp|location=Sequence derived from alignment at scaffold_20:38733..40797+ (Nannochloropsis oceanica) ATGACAGTGGCTTTCTACTGCCACGATTGCATTGCCGAGCTCCAGCATCA ATTTTTGTCGTTGTCGGATTGTCAGCCCCGCGAGACGTTAAAATACGTAG TAAAGGAAAATATGGCTCCATCTTCTGCCTCCAACAAGACGCCGTCTCAC GACGAGGATCCCATTCGAAAACAGCTCAAAATCCTGTCTCCTCTGCCGCA TGTGCCTTGGGACCACCCCCCGCCTTTAGCCACGGGCGCCGGTAAGGGTA ACAGCCCTGCTTCTTCCCGCCACCGCTACGGAAACCAAGCTGGTAACGAC CGTAGCAGTGACGGCGTCTATCGCCGGACCCGCGCACGTAGCCAGAAGCG TATTTCATTTGGTGATGGCAGCAGCTTTTCTTCCCATCAGCAGCAGCAGG AGGAGGAGGAGGAGGATCGAGTGCGGCAGAAGGTGGGGAAGCAGCAGCGA CGGACAGGGATGCCGGCTTACATGTATTTGTCTCGGTACGATGCCCCTTC TTACCTGGTGGGTAACCCTTACATTCACGGAGGGTACCGTGCCTGCCGAA CACTGCGGGAAAGTTGTCAAGGCTTGTTTTACTACCATAATTCTTGGTTG GACACCTGGACGAGCTGCTTTTCCTGGATCCACGCTCATGTGTTGCTGGC TGTGGCTGTGTGGAGATATGGCGCGTTTGACCAGGATTGGTTGAGTGCAT TTGTGTTCGGGTTATTTTATGTGCACGTGGCGTGGGTGCATGCCCCTGCC AGCATTGTGTGTCACTTGGTGGGGAACGCCGGCATCTCCCAGCACGTGTA CGAGCTGTGCTTGGAGATTGATTACCTGGGCATCTTTTCCGCGTCGGTGA TCCTGTCTTTCACTCAAGCTGTATTTGTGTACCCCGCGTGGGCGACATGC GTGAATGTGGCCATGGCCCTGAGCCTGACCGCCTACCTGATCGCCCACCT CCGTCAGGTCGTGGTGTGTCATATTGGCCGCCTACGTATGCTCCTAGAGA TCGGAAGCCTCTACCAATTTCCTCTGTGGTACCAAGCCTACCTCGACTGC GCCTCGTCCTCGCCCTCCCTCCCGCCCACCCTGGCTTCCTCCCTCCATCC CTCCTTGCCAATCTCCCTGCTATGTGCGGTTGGGACGACGGGATCTTTGG TGATGGGGGGCCTGACGTATGCTCTCCATTTCCCCGAATGCTTCGCGCCC GGAAAATTCGATGTCTGGTGGAATTCCCACGCTGTGATGCACGTCTGGAT TAATGTGGCCATGTTCTCGGAGTTCGCCTTCCTTGTCCACATGCTTACCC GCCGCCACGCCTAGATGACAGTGGCTTTCTACTGCCACGATTGCATTGCC GAGCTCCAGCATCAATTTTTGTCGTTGTCGGATTGTCAGCCCCGCGAGAC GTTAAAATACGTAGTAAAGGAAAATATGGCTCCATCTTCTGCCTCCAACA AGACGCCGTCTCACGACGAGGATCCCATTCGAAAACAGCTCAAAATCCTG TCTCCTCTGCCGCATGTGCCTTGGGACCACCCCCCGCCTTTAGCCACGGG CGCCGGTAAGGGTAACAGCCCTGCTTCTTCCCGCCACCGCTACGGAAACC AAGCTGGTAACGACCGTAGCAGTGACGGCGTCTATCGCCGGACCCGCGCA CGTAGCCAGAAGCGTATTTCATTTGGTGATGGCAGCAGCTTTTCTTCCCA TCAGCAGCAGCAGGAGGAGGAGGAGGAGGATCGAGTGCGGCAGAAGGTGG GGAAGCAGCAGCGACGGACAGGGATGCCGGCTTACATGTATTTGTCTCGG TACGATGCCCCTTCTTACCTGGTGGGTAACCCTTACATTCACGGAGGGTA CCGTGCCTGCCGAACACTGCGGGAAAGTTGTCAAGGCTTGTTTTACTACC ATAATTCTTGGTTGGACACCTGGACGAGCTGCTTTTCCTGGATCCACGCT CATGTGTTGCTGGCTGTGGCTGTGTGGAGATATGGCGCGTTTGACCAGGA TTGGTTGAGTGCATTTGTGTTCGGGTTATTTTATGTGCACGTGGCGTGGG TGCATGCCCCTGCCAGCATTGTGTGTCACTTGGTGGGGAACGCCGGCATC TCCCAGCACGTGTACGAGCTGTGCTTGGAGATTGATTACCTGGGCATCTT TTCCGCGTCGGTGATCCTGTCTTTCACTCAAGCTGTATTTGTGTACCCCG CGTGGGCGACATGCGTGAATGTGGCCATGGCCCTGAGCCTGACCGCCTAC CTGATCGCCCACCTCCGTCAGGTCGTGGTGTGTCATATTGGCCGCCTACG TATGCTCCTAGAGATCGGAAGCCTCTACCAATTTCCTCTGTGGTACCAAG CCTACCTCGACTGCGCCTCGTCCTCGCCCTCCCTCCCGCCCACCCTGGCT TCCTCCCTCCATCCCTCCTTGCCAATCTCCCTGCTATGTGCGGTTGGGAC GACGGGATCTTTGGTGATGGGGGGCCTGACGTATGCTCTCCATTTCCCCG AATGCTTCGCGCCCGGAAAATTCGATGTCTGGTGGAATTCCCACGCTGTG ATGCACGTCTGGATTAATGTGGCCATGTTCTCGGAGTTCGCCTTCCTTGT CCACATGCTTACCCGCCGCCACGCCTAGATGACAGTGGCTTTCTACTGCC ACGATTGCATTGCCGAGCTCCAGCATCAATTTTTGTCGTTGTCGGATTGT CAGCCCCGCGAGACGTTAAAATACGTAGTAAAGGAAAATATGGCTCCATC TTCTGCCTCCAACAAGACGCCGTCTCACGACGAGGATCCCATTCGAAAAC AGCTCAAAATCCTGTCTCCTCTGCCGCATGTGCCTTGGGACCACCCCCCG CCTTTAGCCACGGGCGCCGGTAAGGGTAACAGCCCTGCTTCTTCCCGCCA CCGCTACGGAAACCAAGCTGGTAACGACCGTAGCAGTGACGGCGTCTATC GCCGGACCCGCGCACGTAGCCAGAAGCGTATTTCATTTGGTGATGGCAGC AGCTTTTCTTCCCATCAGCAGCAGCAGGAGGAGGAGGAGGAGGATCGAGT GCGGCAGAAGGTGGGGAAGCAGCAGCGACGGACAGGGATGCCGGCTTACA TGTATTTGTCTCGGTACGATGCCCCTTCTTACCTGGTGGGTAACCCTTAC ATTCACGGAGGGTACCGTGCCTGCCGAACACTGCGGGAAAGTTGTCAAGG CTTGTTTTACTACCATAATTCTTGGTTGGACACCTGGACGAGCTGCTTTT CCTGGATCCACGCTCATGTGTTGCTGGCTGTGGCTGTGTGGAGATATGGC GCGTTTGACCAGGATTGGTTGAGTGCATTTGTGTTCGGGTTATTTTATGT GCACGTGGCGTGGGTGCATGCCCCTGCCAGCATTGTGTGTCACTTGGTGG GGAACGCCGGCATCTCCCAGCACGTGTACGAGCTGTGCTTGGAGATTGAT TACCTGGGCATCTTTTCCGCGTCGGTGATCCTGTCTTTCACTCAAGCTGT ATTTGTGTACCCCGCGTGGGCGACATGCGTGAATGTGGCCATGGCCCTGA GCCTGACCGCCTACCTGATCGCCCACCTCCGTCAGGTCGTGGTGTGTCAT ATTGGCCGCCTACGTATGCTCCTAGAGATCGGAAGCCTCTACCAATTTCC TCTGTGGTACCAAGCCTACCTCGACTGCGCCTCGTCCTCGCCCTCCCTCC CGCCCACCCTGGCTTCCTCCCTCCATCCCTCCTTGCCAATCTCCCTGCTA TGTGCGGTTGGGACGACGGGATCTTTGGTGATGGGGGGCCTGACGTATGC TCTCCATTTCCCCGAATGCTTCGCGCCCGGAAAATTCGATGTCTGGTGGA ATTCCCACGCTGTGATGCACGTCTGGATTAATGTGGCCATGTTCTCGGAG TTCGCCTTCCTTGTCCACATGCTTACCCGCCGCCACGCCTAGATGACAGT GGCTTTCTACTGCCACGATTGCATTGCCGAGCTCCAGCATCAATTTTTGT CGTTGTCGGATTGTCAGCCCCGCGAGACGTTAAAATACGTAGTAAAGGAA AATATGGCTCCATCTTCTGCCTCCAACAAGACGCCGTCTCACGACGAGGA TCCCATTCGAAAACAGCTCAAAATCCTGTCTCCTCTGCCGCATGTGCCTT GGGACCACCCCCCGCCTTTAGCCACGGGCGCCGGTAAGGGTAACAGCCCT GCTTCTTCCCGCCACCGCTACGGAAACCAAGCTGGTAACGACCGTAGCAG TGACGGCGTCTATCGCCGGACCCGCGCACGTAGCCAGAAGCGTATTTCAT TTGGTGATGGCAGCAGCTTTTCTTCCCATCAGCAGCAGCAGGAGGAGGAG GAGGAGGATCGAGTGCGGCAGAAGGTGGGGAAGCAGCAGCGACGGACAGG GATGCCGGCTTACATGTATTTGTCTCGGTACGATGCCCCTTCTTACCTGG TGGGTAACCCTTACATTCACGGAGGGTACCGTGCCTGCCGAACACTGCGG GAAAGTTGTCAAGGCTTGTTTTACTACCATAATTCTTGGTTGGACACCTG GACGAGCTGCTTTTCCTGGATCCACGCTCATGTGTTGCTGGCTGTGGCTG TGTGGAGATATGGCGCGTTTGACCAGGATTGGTTGAGTGCATTTGTGTTC GGGTTATTTTATGTGCACGTGGCGTGGGTGCATGCCCCTGCCAGCATTGT GTGTCACTTGGTGGGGAACGCCGGCATCTCCCAGCACGTGTACGAGCTGT GCTTGGAGATTGATTACCTGGGCATCTTTTCCGCGTCGGTGATCCTGTCT TTCACTCAAGCTGTATTTGTGTACCCCGCGTGGGCGACATGCGTGAATGT GGCCATGGCCCTGAGCCTGACCGCCTACCTGATCGCCCACCTCCGTCAGG TCGTGGTGTGTCATATTGGCCGCCTACGTATGCTCCTAGAGATCGGAAGC CTCTACCAATTTCCTCTGTGGTACCAAGCCTACCTCGACTGCGCCTCGTC CTCGCCCTCCCTCCCGCCCACCCTGGCTTCCTCCCTCCATCCCTCCTTGC CAATCTCCCTGCTATGTGCGGTTGGGACGACGGGATCTTTGGTGATGGGG GGCCTGACGTATGCTCTCCATTTCCCCGAATGCTTCGCGCCCGGAAAATT CGATGTCTGGTGGAATTCCCACGCTGTGATGCACGTCTGGATTAATGTGG CCATGTTCTCGGAGTTCGCCTTCCTTGTCCACATGCTTACCCGCCGCCAC GCCTAGATGACAGTGGCTTTCTACTGCCACGATTGCATTGCCGAGCTCCA GCATCAATTTTTGTCGTTGTCGGATTGTCAGCCCCGCGAGACGTTAAAAT ACGTAGTAAAGGAAAATATGGCTCCATCTTCTGCCTCCAACAAGACGCCG TCTCACGACGAGGATCCCATTCGAAAACAGCTCAAAATCCTGTCTCCTCT GCCGCATGTGCCTTGGGACCACCCCCCGCCTTTAGCCACGGGCGCCGGTA AGGGTAACAGCCCTGCTTCTTCCCGCCACCGCTACGGAAACCAAGCTGGT AACGACCGTAGCAGTGACGGCGTCTATCGCCGGACCCGCGCACGTAGCCA GAAGCGTATTTCATTTGGTGATGGCAGCAGCTTTTCTTCCCATCAGCAGC AGCAGGAGGAGGAGGAGGAGGATCGAGTGCGGCAGAAGGTGGGGAAGCAG CAGCGACGGACAGGGATGCCGGCTTACATGTATTTGTCTCGGTACGATGC CCCTTCTTACCTGGTGGGTAACCCTTACATTCACGGAGGGTACCGTGCCT GCCGAACACTGCGGGAAAGTTGTCAAGGCTTGTTTTACTACCATAATTCT TGGTTGGACACCTGGACGAGCTGCTTTTCCTGGATCCACGCTCATGTGTT GCTGGCTGTGGCTGTGTGGAGATATGGCGCGTTTGACCAGGATTGGTTGA GTGCATTTGTGTTCGGGTTATTTTATGTGCACGTGGCGTGGGTGCATGCC CCTGCCAGCATTGTGTGTCACTTGGTGGGGAACGCCGGCATCTCCCAGCA CGTGTACGAGCTGTGCTTGGAGATTGATTACCTGGGCATCTTTTCCGCGT CGGTGATCCTGTCTTTCACTCAAGCTGTATTTGTGTACCCCGCGTGGGCG ACATGCGTGAATGTGGCCATGGCCCTGAGCCTGACCGCCTACCTGATCGC CCACCTCCGTCAGGTCGTGGTGTGTCATATTGGCCGCCTACGTATGCTCC TAGAGATCGGAAGCCTCTACCAATTTCCTCTGTGGTACCAAGCCTACCTC GACTGCGCCTCGTCCTCGCCCTCCCTCCCGCCCACCCTGGCTTCCTCCCT CCATCCCTCCTTGCCAATCTCCCTGCTATGTGCGGTTGGGACGACGGGAT CTTTGGTGATGGGGGGCCTGACGTATGCTCTCCATTTCCCCGAATGCTTC GCGCCCGGAAAATTCGATGTCTGGTGGAATTCCCACGCTGTGATGCACGT CTGGATTAATGTGGCCATGTTCTCGGAGTTCGCCTTCCTTGTCCACATGC TTACCCGCCGCCACGCCTAG back to top
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