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Properties
| Property Name | Value |
|---|
| TranscriptId | 156412 |
| Track | FilteredModels2 |
| ProteinId | 156326 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_20 | supercontig | scaffold_20:24743..26103 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7463 ID=mRNA_7463|Name=jgi.p|Nanoce1779_2|156326|organism=Nannochloropsis oceanica|type=mRNA|length=1361bp
CTACTTTACTGATACATCTGTACTCAAATTAACGCTTGTCTCTCCCTTCT
TCTATTTTTCCCGCACAGAGGAGTTTCCTGTGGCCGGGAGAGCTGGATGA
TCCCGGGAAGAAACAGGGCGAGGACGAAGGCGGGGTAAAAATGGAAGAGC
GCAGCGGAGCAGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTTCTCC
CCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCTGTATTTTCCTCCCTCAG
CAACGGAACATATGCCAGCGAGGAGAAGGCGTTTTATATTTCGGACTCTG
ATCTAAGCGTGGCCTCCTCTCCTTCCCTCCTTTCCTCCATCTTCCACGTC
GGTCCTCATGGGGGGAGGGTGGGAGGGGTTGATGAGTGGGATGAGGAAGA
GGGGGAATGGGAGGTGAATGAAGAGGGAGAGGCGGAGGAAGAGGAGAGGG
GAGATGAAGAAAGAGAAGCAAGTAGTGAGGGAGGTGGCCTGGGAGAGTTA
ACGTGGTGGGAAGTGTTGGGGGAGAGCCCGCCCCAGGAGTCAGAGGAGGA
AAGGGAGGGAGGAAAGAAGGAGACGAAAGGTAGGAAGATGCCAGTGACGG
CACATTACACCCATAGCAGCGTTGGTAGTACTAATAGGAGCTCTTTTTCT
TCTAGAAACAACGTGGACCACTTGTGGGAGATATTCAGCTCTTCGGCGCC
ACCTCCTCCCCCTCCTTCTTTCTCTCCGCACCCCTCACTCTCCTCAGTCT
CGTACGTGTCGTCCGGCATTGCCGATGAACAGGGATGCAAACGAGGTGGA
AGGCGACGCTATGGGGGAAAGGGAAGACAAGCTTGCTTGAGGGACGAAAT
GTCTCAGATCCTCATCAAAGAGCGGGATCCAGGAGCGGACATTTGGGATG
TACATATGGGATCGAACGGCACGCTTCAACGGCGCCCACGGTGGTGTGTG
TATGGATGTTGAAAGGAGGTTTAAAAAGACAATGAGCAAGATGCAAAAGG
CTCAAAAAAAATGTGAAAAAGACAAGAATCATATCACGCATGCAGGCATA
AATAGCACGTAAAACTCATTCCTCCAAAACACGAATCGTTGCGGACACGG
AGGGGGGTCAAGCTGCAGTATTCGGGTGTTTTCTCAAGCTTCGATCTCCA
AACAACTGGAAAAATGAACACAAAGACTCAATACGAAAACAGCGCAGTAA
GCGTCTAAACCCAGGCAAGGGTAGTCGAGTATGTCATAGGTTCTTTGGTA
AACGTCCGGTACTCCTGACGAAATTTTCAAACCAGGCTACCATGCAGTGG
AGTGACTGATGATAAGCAATTTTTTCATTGAGGAGATGATACAATAAACG
ACGGCCCGAAT back to topprotein sequence of jgi.p|Nanoce1779_2|156326 >mRNA_7463-protein ID=mRNA_7463-protein|Name=jgi.p|Nanoce1779_2|156326|organism=Nannochloropsis oceanica|type=polypeptide|length=274bp
MEERSGAASSSSSSSSSSFSPSSSSSSSSSAVFSSLSNGTYASEEKAFYI
SDSDLSVASSPSLLSSIFHVGPHGGRVGGVDEWDEEEGEWEVNEEGEAEE
EERGDEEREASSEGGGLGELTWWEVLGESPPQESEEEREGGKKETKGRKM
PVTAHYTHSSVGSTNRSSFSSRNNVDHLWEIFSSSAPPPPPPSFSPHPSL
SSVSYVSSGIADEQGCKRGGRRRYGGKGRQACLRDEMSQILIKERDPGAD
IWDVHMGSNGTLQRRPRWCVYGC* back to topmRNA from alignment at scaffold_20:24743..26103- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7463 ID=mRNA_7463|Name=jgi.p|Nanoce1779_2|156326|organism=Nannochloropsis oceanica|type=mRNA|length=1361bp|location=Sequence derived from alignment at scaffold_20:24743..26103- (Nannochloropsis oceanica)
CTACTTTACTGATACATCTGTACTCAAATTAACGCTTGTCTCTCCCTTCT
TCTATTTTTCCCGCACAGAGGAGTTTCCTGTGGCCGGGAGAGCTGGATGA
TCCCGGGAAGAAACAGGGCGAGGACGAAGGCGGGGTAAAAATGGAAGAGC
GCAGCGGAGCAGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTTCTCC
CCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCTGTATTTTCCTCCCTCAG
CAACGGAACATATGCCAGCGAGGAGAAGGCGTTTTATATTTCGGACTCTG
ATCTAAGCGTGGCCTCCTCTCCTTCCCTCCTTTCCTCCATCTTCCACGTC
GGTCCTCATGGGGGGAGGGTGGGAGGGGTTGATGAGTGGGATGAGGAAGA
GGGGGAATGGGAGGTGAATGAAGAGGGAGAGGCGGAGGAAGAGGAGAGGG
GAGATGAAGAAAGAGAAGCAAGTAGTGAGGGAGGTGGCCTGGGAGAGTTA
ACGTGGTGGGAAGTGTTGGGGGAGAGCCCGCCCCAGGAGTCAGAGGAGGA
AAGGGAGGGAGGAAAGAAGGAGACGAAAGGTAGGAAGATGCCAGTGACGG
CACATTACACCCATAGCAGCGTTGGTAGTACTAATAGGAGCTCTTTTTCT
TCTAGAAACAACGTGGACCACTTGTGGGAGATATTCAGCTCTTCGGCGCC
ACCTCCTCCCCCTCCTTCTTTCTCTCCGCACCCCTCACTCTCCTCAGTCT
CGTACGTGTCGTCCGGCATTGCCGATGAACAGGGATGCAAACGAGGTGGA
AGGCGACGCTATGGGGGAAAGGGAAGACAAGCTTGCTTGAGGGACGAAAT
GTCTCAGATCCTCATCAAAGAGCGGGATCCAGGAGCGGACATTTGGGATG
TACATATGGGATCGAACGGCACGCTTCAACGGCGCCCACGGTGGTGTGTG
TATGGATGTTGAAAGGAGGTTTAAAAAGACAATGAGCAAGATGCAAAAGG
CTCAAAAAAAATGTGAAAAAGACAAGAATCATATCACGCATGCAGGCATA
AATAGCACGTAAAACTCATTCCTCCAAAACACGAATCGTTGCGGACACGG
AGGGGGGTCAAGCTGCAGTATTCGGGTGTTTTCTCAAGCTTCGATCTCCA
AACAACTGGAAAAATGAACACAAAGACTCAATACGAAAACAGCGCAGTAA
GCGTCTAAACCCAGGCAAGGGTAGTCGAGTATGTCATAGGTTCTTTGGTA
AACGTCCGGTACTCCTGACGAAATTTTCAAACCAGGCTACCATGCAGTGG
AGTGACTGATGATAAGCAATTTTTTCATTGAGGAGATGATACAATAAACG
ACGGCCCGAAT back to topCoding sequence (CDS) from alignment at scaffold_20:24743..26103- >mRNA_7463 ID=mRNA_7463|Name=jgi.p|Nanoce1779_2|156326|organism=Nannochloropsis oceanica|type=CDS|length=822bp|location=Sequence derived from alignment at scaffold_20:24743..26103- (Nannochloropsis oceanica)
ATGGAAGAGCGCAGCGGAGCAGCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCGTTCTCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGCTGTATTTT
CCTCCCTCAGCAACGGAACATATGCCAGCGAGGAGAAGGCGTTTTATATT
TCGGACTCTGATCTAAGCGTGGCCTCCTCTCCTTCCCTCCTTTCCTCCAT
CTTCCACGTCGGTCCTCATGGGGGGAGGGTGGGAGGGGTTGATGAGTGGG
ATGAGGAAGAGGGGGAATGGGAGGTGAATGAAGAGGGAGAGGCGGAGGAA
GAGGAGAGGGGAGATGAAGAAAGAGAAGCAAGTAGTGAGGGAGGTGGCCT
GGGAGAGTTAACGTGGTGGGAAGTGTTGGGGGAGAGCCCGCCCCAGGAGT
CAGAGGAGGAAAGGGAGGGAGGAAAGAAGGAGACGAAAGGTAGGAAGATG
CCAGTGACGGCACATTACACCCATAGCAGCGTTGGTAGTACTAATAGGAG
CTCTTTTTCTTCTAGAAACAACGTGGACCACTTGTGGGAGATATTCAGCT
CTTCGGCGCCACCTCCTCCCCCTCCTTCTTTCTCTCCGCACCCCTCACTC
TCCTCAGTCTCGTACGTGTCGTCCGGCATTGCCGATGAACAGGGATGCAA
ACGAGGTGGAAGGCGACGCTATGGGGGAAAGGGAAGACAAGCTTGCTTGA
GGGACGAAATGTCTCAGATCCTCATCAAAGAGCGGGATCCAGGAGCGGAC
ATTTGGGATGTACATATGGGATCGAACGGCACGCTTCAACGGCGCCCACG
GTGGTGTGTGTATGGATGTTGA back to top
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