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Properties
| Property Name | Value |
|---|
| TranscriptId | 574075 |
| Track | FilteredModels2 |
| ProteinId | 573989 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:337702..340863 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_744 ID=mRNA_744|Name=jgi.p|Nanoce1779_2|573989|organism=Nannochloropsis oceanica|type=mRNA|length=3014bp
AGCTAAACCCTCTCCAGCAATCAATTCAATTATGGTCAAGATAGTCGGTA
ATAAGGCGGAATTTGACGAGGTTCTAGCCAGCGCGGGGGACAAGGCCGTG
GTGGTGGACTTCTACGCCACATGGTGCGGGCCATGCAAGGTCATTGCCCC
TTACTATGAGGAGCTCTCCAAGCAATTCACCAACGTTGTTTTCATTAAGG
TTGACGTCGACGAGAACGAGGAAGTGGCGTCCTCTGCGGGCATCTCGGCC
ATGCCCACCTTCCAAGTGTACAAGAATGGGAAGAAGGTCGGGGAGCTGAT
GGGCGCTGCCAAGGACAAGCTCCTGGCCCTGGTCGAGGCACACAAGTAAA
GTATCAACTTTTTGCGAGCCGGGGAAAAAGTCAAATAAGAGAAGAGGAAA
TGCGGCTTTGAGTAGAAATGTATGTTATTAGTGGAAAGGTTGGCGTTTCC
ATGTCAAGTTAAGGAAGGTCTTGAAGAAGGGCGTAATGTGTGAGGAGACC
AGGTACGTTGTGCTTGTTTTGACAGGCAGGGCAAGGAGGGACAAAGAGGG
AAAAGATCGCGGGTGCTTGCTGCTTCAAATAATTCCTCGCAATACAGAGT
CTTTTACAATATAATGCGAAGAAACAAGAAAGAAAGAAGGGTCAAAGCAA
ATTTCAATGCGCTCGCATTAGTTTAAAATTCTTTCCCTCACATGTGGTTG
GCGCTCGCTAAGGTTTAACGGATTTTTCTCGGGCCGAGACGACGGTTTAT
CGTTCAGCAACAACTAGGCTAAAGTTGCTTTTTTTACTCCTGTAGAAAGT
CGGGGTCAAGAAGCTTGCTTTTTCGAGCTGCGCGATGGGCTTTGATGCCG
AAGATGAGGAAAGATAGGAGATGTAGCAGCAGCGGCGGCGGCATGCAAGT
AAGAAACAGAGAGTTAAAGAGAAGATTCACGATAATTATGTAGGTGTAAG
ATTCAGTTGCTGAGTAACAAGGCAAAGTATGCAACTTAAAACACCGCAGT
CGCTCCTATCTTGTTGCTTTTTGTTGAAGCCCAGTTCGTTAAATACATTT
GAAATATGTTTATGTGATCCAAATACCAAGTACGAGCATCAAGCAAGCAC
AAACCCACACTCATTCGCCCTGGTGCAATAATGCACAATCGAAGAATGAG
ATGGCGTCTCAACTCCCCCCCTTTCACTTACGCGCGCGCGCGCACACACA
CACACACACACACACACACACGTACATTCACCACCATAAATTTTATCTTG
CATCTGTTCGACCATCCATTATCCGTTATTGCCACAACAATACAACTTTC
AGTCATGTTTTTACTTGTCACTCATTTCCATACTGCTCTGCGTTGCAATT
CTCTTTACTTTCTACCCTCGACTGAGCGATTCAGGGCCACACTCTCCTTC
CATTACTCTGCCCTTCAATCCACTTTTTCACTTTTCATTCGTCCTTTTCT
CCTTCTACACTGTGGGAATTGGATCAATCACCGCCTCTGCCGGCGCCTTA
AACCGGACCCGAAATACGTCCACAGTCGTAGGGCCGACCTGAGCACTCAA
TTGACTCCTCCCTTCCTGCACAGGTGTGGCACCATGCCCCCTGACCAAGC
AAGCCAACCCCAACGCCACCTCCCACTGCTGATCTTGCGCCATATCTGGC
AGCACATACAAGCTGGGACAAATATACTGTCGCGTGGAATATTCAGAAGG
CAAGCGCATGACAGTGTGATCCTCCCACGGACCGGTGATCGCAGGTGACG
TCTTGACAACCAGGCGCTTCCCTTCCTCCTCCCCGTTGTCATCATCTAAA
AGAATGTCGCCCATAAACCAGAGTTTAGGGCCAGACAAGTAACCCAGCCC
CACGCGCTCCATGACCAATGCTTTGGCCTGTCCCTCTTCCGACGGAAGCA
ACGTCTTGGAGTGATTTCGCAGTCGCTCAGCAGCCTCTGCTGGACTTCCC
GTCTCCAGCACCGTCTCAGCGTACGAAACCCATTGTCCTTCATTTCTTAC
TTCCTCATCAGCAGCACCTACCGCAGCAGCAGTAGCAAAAATTTCCATCT
TTTCCACCGACATGCGCATCAAGGAAACCAGGGGTACCTTGGAAACCACG
TGCTCCCTCTTCAAATACCACGAGTTCTCTGTTGTCACATTCGTAGTTTG
TTCTCCCATAATATACACAGAATCCGTCGTCGGGTTGCGCGAGACAAGGC
TGCCATCCGTCAGAGCCATCGCTGTGTGCCATCCATTCCATTTGTCCGTC
CCTGGAAATTGTCTCACGTCGTACACCCACCTACTAGGCGGCATCTGGGC
ATTCGTAACCACCACCACTGCCGAGCCGAGCTGTGTGCGCTCGCCTTCAA
TGTAAGATGCACTTACGTTCTGACGTTGGCAGAGCAGGATGAGTCGAACT
TGATCAGGGTGTCGCTCAGGGACCACGGCCAAGCCCGCCGTGGGTAAGAG
GGTCTGATCCGAACCCAGCGTTCCATCATTTAGGATAGACGCGGGCATAC
CCTGATTCTCTCGATGCCTCCAAAAGTAATCAATGATCTTGTTGGCTGGT
GATAGGAGAGCGACGGCATCATCAAGGACAAATGCGGCCTCGGGCTTGGT
ATTGTTCATGTGACCAATCCGCGTCTCCCCCAACATCCAGACCATCTCCG
GGGTATTGGTCACTACAGCCGCCGCTGGAGGAGTAGCACCATGAGTAACA
GAGGACGGATTCCGCGGCAAGCTTACAGGAGTGCCTAGCATTGCGTCCAG
AAACCCCAAACGTTGCGGACGAAACAATTTACCCAGCACCTGAGAGTCAT
GCGACACTTCCAAGCCATGCCCAGCGATGCGCCGTGTCTCCCCCTCCTGC
TGCTGCTTATTAGAATTGCTGCGGTTGGAAATCATAACGCTTGCCGATAA
GTCCACTGCATGCAAATTATCAAAGATATGCAAACCTCCCTCCCCTCCCT
GCAAGTGTAGAGCTACACCCAAACTCCGGATATACGCCCCGTCCACATGC
CCCACAAAGGGAGT back to topprotein sequence of jgi.p|Nanoce1779_2|573989 >mRNA_744-protein ID=mRNA_744-protein|Name=jgi.p|Nanoce1779_2|573989|organism=Nannochloropsis oceanica|type=polypeptide|length=106bp
MVKIVGNKAEFDEVLASAGDKAVVVDFYATWCGPCKVIAPYYEELSKQFT
NVVFIKVDVDENEEVASSAGISAMPTFQVYKNGKKVGELMGAAKDKLLAL
VEAHK* back to topmRNA from alignment at scaffold_2:337702..340863- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_744 ID=mRNA_744|Name=jgi.p|Nanoce1779_2|573989|organism=Nannochloropsis oceanica|type=mRNA|length=3162bp|location=Sequence derived from alignment at scaffold_2:337702..340863- (Nannochloropsis oceanica)
AGCTAAACCCTCTCCAGCAATCAATTCAATTATGGTCAAGATAGTCGGTA
ATAAGGCGGAATTTGACGAGGTTCTAGCCAGCGCGGGGGACAAGGCCGTG
GTGGTGGACTTCTACGCCACATGGTGCGGGCCATGCAAGGTCATTGCCCC
TTACTATGAGGAGCTCTCCAAGCAATTCACCAACGTTGTTTTCATTAAGG
TAGGAATAGAAAAGAGATAACGATGGGAAGATATCAAAGGGGGTGGGGCT
ATAACATGTCGTTTGACTTTCTCCTGATCACTAGTTTCTCCTGCTGAACC
AAAACCATCTCTCCCAACATGCCCACCCACCCCGACAAACCATTAAGGTT
GACGTCGACGAGAACGAGGAAGTGGCGTCCTCTGCGGGCATCTCGGCCAT
GCCCACCTTCCAAGTGTACAAGAATGGGAAGAAGGTCGGGGAGCTGATGG
GCGCTGCCAAGGACAAGCTCCTGGCCCTGGTCGAGGCACACAAGTAAAGT
ATCAACTTTTTGCGAGCCGGGGAAAAAGTCAAATAAGAGAAGAGGAAATG
CGGCTTTGAGTAGAAATGTATGTTATTAGTGGAAAGGTTGGCGTTTCCAT
GTCAAGTTAAGGAAGGTCTTGAAGAAGGGCGTAATGTGTGAGGAGACCAG
GTACGTTGTGCTTGTTTTGACAGGCAGGGCAAGGAGGGACAAAGAGGGAA
AAGATCGCGGGTGCTTGCTGCTTCAAATAATTCCTCGCAATACAGAGTCT
TTTACAATATAATGCGAAGAAACAAGAAAGAAAGAAGGGTCAAAGCAAAT
TTCAATGCGCTCGCATTAGTTTAAAATTCTTTCCCTCACATGTGGTTGGC
GCTCGCTAAGGTTTAACGGATTTTTCTCGGGCCGAGACGACGGTTTATCG
TTCAGCAACAACTAGGCTAAAGTTGCTTTTTTTACTCCTGTAGAAAGTCG
GGGTCAAGAAGCTTGCTTTTTCGAGCTGCGCGATGGGCTTTGATGCCGAA
GATGAGGAAAGATAGGAGATGTAGCAGCAGCGGCGGCGGCATGCAAGTAA
GAAACAGAGAGTTAAAGAGAAGATTCACGATAATTATGTAGGTGTAAGAT
TCAGTTGCTGAGTAACAAGGCAAAGTATGCAACTTAAAACACCGCAGTCG
CTCCTATCTTGTTGCTTTTTGTTGAAGCCCAGTTCGTTAAATACATTTGA
AATATGTTTATGTGATCCAAATACCAAGTACGAGCATCAAGCAAGCACAA
ACCCACACTCATTCGCCCTGGTGCAATAATGCACAATCGAAGAATGAGAT
GGCGTCTCAACTCCCCCCCTTTCACTTACGCGCGCGCGCGCACACACACA
CACACACACACACACACACGTACATTCACCACCATAAATTTTATCTTGCA
TCTGTTCGACCATCCATTATCCGTTATTGCCACAACAATACAACTTTCAG
TCATGTTTTTACTTGTCACTCATTTCCATACTGCTCTGCGTTGCAATTCT
CTTTACTTTCTACCCTCGACTGAGCGATTCAGGGCCACACTCTCCTTCCA
TTACTCTGCCCTTCAATCCACTTTTTCACTTTTCATTCGTCCTTTTCTCC
TTCTACACTGTGGGAATTGGATCAATCACCGCCTCTGCCGGCGCCTTAAA
CCGGACCCGAAATACGTCCACAGTCGTAGGGCCGACCTGAGCACTCAATT
GACTCCTCCCTTCCTGCACAGGTGTGGCACCATGCCCCCTGACCAAGCAA
GCCAACCCCAACGCCACCTCCCACTGCTGATCTTGCGCCATATCTGGCAG
CACATACAAGCTGGGACAAATATACTGTCGCGTGGAATATTCAGAAGGCA
AGCGCATGACAGTGTGATCCTCCCACGGACCGGTGATCGCAGGTGACGTC
TTGACAACCAGGCGCTTCCCTTCCTCCTCCCCGTTGTCATCATCTAAAAG
AATGTCGCCCATAAACCAGAGTTTAGGGCCAGACAAGTAACCCAGCCCCA
CGCGCTCCATGACCAATGCTTTGGCCTGTCCCTCTTCCGACGGAAGCAAC
GTCTTGGAGTGATTTCGCAGTCGCTCAGCAGCCTCTGCTGGACTTCCCGT
CTCCAGCACCGTCTCAGCGTACGAAACCCATTGTCCTTCATTTCTTACTT
CCTCATCAGCAGCACCTACCGCAGCAGCAGTAGCAAAAATTTCCATCTTT
TCCACCGACATGCGCATCAAGGAAACCAGGGGTACCTTGGAAACCACGTG
CTCCCTCTTCAAATACCACGAGTTCTCTGTTGTCACATTCGTAGTTTGTT
CTCCCATAATATACACAGAATCCGTCGTCGGGTTGCGCGAGACAAGGCTG
CCATCCGTCAGAGCCATCGCTGTGTGCCATCCATTCCATTTGTCCGTCCC
TGGAAATTGTCTCACGTCGTACACCCACCTACTAGGCGGCATCTGGGCAT
TCGTAACCACCACCACTGCCGAGCCGAGCTGTGTGCGCTCGCCTTCAATG
TAAGATGCACTTACGTTCTGACGTTGGCAGAGCAGGATGAGTCGAACTTG
ATCAGGGTGTCGCTCAGGGACCACGGCCAAGCCCGCCGTGGGTAAGAGGG
TCTGATCCGAACCCAGCGTTCCATCATTTAGGATAGACGCGGGCATACCC
TGATTCTCTCGATGCCTCCAAAAGTAATCAATGATCTTGTTGGCTGGTGA
TAGGAGAGCGACGGCATCATCAAGGACAAATGCGGCCTCGGGCTTGGTAT
TGTTCATGTGACCAATCCGCGTCTCCCCCAACATCCAGACCATCTCCGGG
GTATTGGTCACTACAGCCGCCGCTGGAGGAGTAGCACCATGAGTAACAGA
GGACGGATTCCGCGGCAAGCTTACAGGAGTGCCTAGCATTGCGTCCAGAA
ACCCCAAACGTTGCGGACGAAACAATTTACCCAGCACCTGAGAGTCATGC
GACACTTCCAAGCCATGCCCAGCGATGCGCCGTGTCTCCCCCTCCTGCTG
CTGCTTATTAGAATTGCTGCGGTTGGAAATCATAACGCTTGCCGATAAGT
CCACTGCATGCAAATTATCAAAGATATGCAAACCTCCCTCCCCTCCCTGC
AAGTGTAGAGCTACACCCAAACTCCGGATATACGCCCCGTCCACATGCCC
CACAAAGGGAGT back to topCoding sequence (CDS) from alignment at scaffold_2:337702..340863- >mRNA_744 ID=mRNA_744|Name=jgi.p|Nanoce1779_2|573989|organism=Nannochloropsis oceanica|type=CDS|length=636bp|location=Sequence derived from alignment at scaffold_2:337702..340863- (Nannochloropsis oceanica)
GTTGACGTCGACGAGAACGAGGAAGTGGCGTCCTCTGCGGGCATCTCGGC
CATGCCCACCTTCCAAGTGTACAAGAATGGGAAGAAGGTCGGGGAGCTGA
TGGGCGCTGCCAAGGACAAGCTCCTGGCCCTGGTCGAGGCACACAAGTAA
ATGGTCAAGATAGTCGGTAATAAGGCGGAATTTGACGAGGTTCTAGCCAG
CGCGGGGGACAAGGCCGTGGTGGTGGACTTCTACGCCACATGGTGCGGGC
CATGCAAGGTCATTGCCCCTTACTATGAGGAGCTCTCCAAGCAATTCACC
AACGTTGTTTTCATTAAGGTTGACGTCGACGAGAACGAGGAAGTGGCGTC
CTCTGCGGGCATCTCGGCCATGCCCACCTTCCAAGTGTACAAGAATGGGA
AGAAGGTCGGGGAGCTGATGGGCGCTGCCAAGGACAAGCTCCTGGCCCTG
GTCGAGGCACACAAGTAAATGGTCAAGATAGTCGGTAATAAGGCGGAATT
TGACGAGGTTCTAGCCAGCGCGGGGGACAAGGCCGTGGTGGTGGACTTCT
ACGCCACATGGTGCGGGCCATGCAAGGTCATTGCCCCTTACTATGAGGAG
CTCTCCAAGCAATTCACCAACGTTGTTTTCATTAAG back to top
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