jgi.p|Nanoce1779_2|624574, mRNA_726 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|624574
Unique Name	mRNA_726
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5785
Alignment location	scaffold_2:292142..298075 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	624660
Track	FilteredModels2
ProteinId	624574

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_2	supercontig	scaffold_2:292142..298075 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|624574	gene_726	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|624574	mRNA_726-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_726	CDS_726	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_2:292142..298075+
coding sequence from alignment at scaffold_2:292142..298075+

mRNA sequence

>mRNA_726 ID=mRNA_726|Name=jgi.p|Nanoce1779_2|624574|organism=Nannochloropsis oceanica|type=mRNA|length=5785bp
GGCTAGACTGTGCTTGACAGCAGCTTCATGCTTTGGTGAATGAATTTTAA
TTTTGTTGAATGCAGATCAAAGACACCATATAAATTTTGTAGTTCCTGCT
TATAATCGTCTTACCTTGACCTTGCCTTTCCAGCCACCTCCCACGCCCGG
TCCCTTGATACCTCTCATAGCCATTTACCCAATACCAGGTACTATGGATC
ATCGGCTCCTCTGAATTTCCTGGAAGCCAGATTCTCTTTTTTCTCAAGAA
GTGGTCGCATCCGGGCAACAATCATTTTGTGCTGCTGCTGCAATTTGCCT
ACCTCAGGCAATTGTTGAGCGTCGGGACGAGTCAAACACGTCCCCCAAGT
GTATTCTAGGCGATTCAAGAGCCACATCCGCCAGTCTGTCTCCTGGCGAC
CAGGCCCCCGGTACCACTGGGATGCAGTGGTGGCAAGGGAAGCATCGTTA
AAGGGACTAACACGGGGCACACGGCGCAATTGAGCCTCGGCGGTCGCCAA
GGAAACCGTGGGGCTGAGGTACAAAAGATGGTAATAGGCCAAGCCCAGGT
TATTTAGTGTGTGTGTCGTGTGCTCAGGGTCATGTGCAACTAGCACTTCA
AGCCACCATGCCGCATCCAAGAAATGCTTCAGCACCAGCGTGGAGGACAT
TTTGGTCGTTGTGGGGCTGTGTGTCATATCGTCGTTGCCTCCTCCCGCAC
TTCTGTTGTAAAGGTTCTGGTGCCCAATCGCTTCGTCGAGCGCGTGCGCC
GCAGTCTCGGCCAAATGATCTAGATAGTCGCGCCTGATTTCATACTCCCA
CTTCCCTCGCTGGTACTTATCAAGGGCAGGGAGCTCCGCAAGTGACAATA
AGTTTTGCGAGTGCTGCTGAAGAAGATGCCATGTTTCAAAGATTCGCTTG
AGCCATTCTTTCATTGTCCACACGTCTTCGCGCCGAAAAAGCTGCATGTT
CAAGCCCATCGGCAGCATTGTAAAGACAGATCGAAGCTGCTCCTCGGTCT
GAGAAAATGTCAGGTTTCCTGCCACAAAAATGCCCCCAACCCGGTCGATA
TTGGCGTCCACAAACTGATGCATGGCAAAAGCCTGGCCTCCGCGCGCCAA
GCAATGATTTTCTGGAACGTGGTGTGTACCGGGAAAAATAACTTTTCCAC
TGTGATGACTGCCCAATGACGGCCACCATGGAAGGCTCATGAGCGACAAC
TTTAGAATCGTCACGTCCAGCCGGTAGTTCTTACAGCTTTGCATGTACCG
CAACGAATTCCATTGCAATTTATGATTTACGAGTAGCAACGAATCCGGCG
GTAAGGGCGCGAGCAAGCTCCGAGCATATTTTTCGGAGTAGGTGTTGGCG
TACTGGCCCGACATCGCAAAGTGCTGCTGAAATTGCCACAAGGCCAGAAC
CACGCATACGGCCTGAGCCAATGAGGCCGTCAGATTAAACGAAAATCGCG
AATCCTGTTGTCTTCCCACCTGCCACTGCCCCCGCGCCACCACACACGAC
AGCCAATCCATACCAACGCCTGCCAACATAAAGACCAACAAGTTAGCTTG
CATCCAGAAGCGCGCCATCATGTTGTAAGACAACTCAACGCTCTCATTCA
GTGGCTCTGGCGAGAAAAAGTCAAAAGCAAACAGAGACAAGACCCAGGCT
CCTCCAAGAGCCCAAATCACGTGGTGACTCTCTTGGCGTGCCTTTGCCTC
GGCTTTGTGGTAGGGACCTTGGCTTCGAGCATCCTTAGTGTGCGTGCATG
GTGGTTGCGGAGCCGGTACATTTGTAAGAATTTGCTGAATATATCCGTCC
GTTGCCCGTGTCACCTTGGCTCGTTCACCCCTGTAGCGCGGAGGTAACAG
GAACGGTGCCGTAAAGACCGTGGCTGCGACATAACCCAACAGCGCCAGCA
GAGGCACCAAACCCCATTGACCCTGACGCAAGATTAGATCCCACGCATAA
GCACCCTGCGAACAGTAAGCTGACTCCCGATAGGTTACATCATCCGGATC
TGAGGCTGGTTGTAAATCAGGGAATTCTCCCTGGCGTAATTGGCTCCATA
TTTCTTGCCATGTTATCATGTTGCCAAGTCTGCCGATTTGAGGGCGCCAC
AAAACACTCAAGAGTGCGTAGACCAATGGAAATAAGCCCAAAATAAACCA
TCTCCCAAGCTCGATGATGATACCGCTCGGCTGCCTCGCCAAGTCGCGCC
GCAGGCACCAGGCCAAATAGAACACAACCGGTACTTCAACAAGAATGGCC
GTATGCTGATTAGCCAGGGCCAGACCACAAAGCAATGTAGTGGTGCAGGC
CCAAAATCGCCTATCCTGAGATGTCCAACTGGAGGCAAAGCGGAGTGTAG
TGTATAGCAGAAGGGCCAGCAGAGCATTGTTCAAAGCAAAGACCTCGGCT
GAAACTGCGTATCGCCATACCAAAGGCGACCACGCAAAAAGCCCTGCACC
CGCAGCCGCAGCCACCAATGTCGTCGTACTTGTCGCTGTTGCAAGGGAAT
CATTGCTCGAAGACATAGAGGGATGATAGCATCGATGCCGCGCCTGCCCA
AACACCACAATGCACAAGAAAAGGCACCCAGCGGCCATAGTCGTGCAAAT
AGCCGAGATTATGTTGGCCTTCCAAGAAGGACTCCCGGCCACAGGCAAGC
ACAGAATCACCAGACGTTGCAGAAGCGTCAAGAGCGGGTATTGTGTTAAT
CGGAGGGTATCCAATCGGCACGCCTCAGCGACAAGCTTCCCGCTATCCCC
GCCAGCAATGACCTCGCCGAGCGTTGTCCAATAACTAGCCATGATTAGAC
CACACGTGACCCAGAGCCATACCCAAGTGACCAAGTCATGTCGGTGGGAT
GGTAGTGACAATGCTCGTGCTGAGACCGATGCGAACAACACTTTGAAACG
ATCTGTCACTTCCTGCGCTTGGGCAGCACGCCGTTCCGCCCGTCGCTGAA
GTTGAGACGGAGGCAACCACCTAGACGACGAGGAAACCCGACGTCTACTG
GTTGTGACAGCAGCCGCTGACAATTTTTCTGCCTCAAAAATAGGCTGCAC
CGGATGCCGGCCGGTGGAACCCTCAAACATTCCTTTGCGGTCTTAGTCTG
GAGTCGGGGTGTAGGAGGAGGGGTAGGAGGGGTGGTTTGGAGCTATCGAT
TGACAGACAAAAGACTAGCACACCGTGTTACACGCACTAAGAGGAGTTAT
AGGCGTGGGTTGTGCTGAGCACCATAGCAGCGCTGACACGAGTAACGAGA
AGGTTCCTTGAGAAGTGGAACGTAACGTGCAGACCGTACGAGAAACACTT
GCTTTCCTCGTTCACTCCTCTATCCCGAGGCAATTTCAAGAATAGCTTCT
CAAGCCAGGCATAATTTTGTTTTCACGCTGTCTGAGATCACCACCACCAC
ATACACTTAAAATTTTGAGCAATAGACATATAGTGAGAGGCAGAGACAGG
ACCGAAGGAGGCAGGACAGACAGCAAGCCAACACAACCACCACGACCACC
AAGAAACCTCACGATGCCGGGCACGCGTCTATTCGTGGGCAATCTTACGT
CCGCCGCCACGGCGGAGGATCTGCGGGACCTGTTTAAGGAATTCGGCCCC
ATTGACCGCATTGATATGAAGAAGGAAGGCGGATTTGGCTTTGTCGAGTT
CATCCGTGGGCGTGACGGAGAAGAGGCTCTAGTGAAGGCCGCCCAGAGCG
TGAACGGCAAGGAGCTGCATGGCGTAACCTTGACGGTAGAGGAGGCGAAA
GGACCGAAGCGCGAAGGTCCCCGCCCACAGATGCAGCGAAGTGAGCACCG
GGTCCGCGTGGAGGGCATGCCACGTGGGAGCACGTGGCAAGACCTAAAGG
ACTTCGCGCGGGGGAGCACGGGCTTAGCTCCTTTGTACACGGAAGTGGTG
CGAGGCAACCCTAGCGTGGGCATCATTGAGTACCATCGACGGGAGGATAT
GATTGAAGCCCTGCGGCAAATCAACAACACTGAACTAAGGGGCGTGATGG
TGCAGGTGTACGAGGATGCCCCCTCTGGCCGTGGCCGTGGTGACGAGCGA
CGCCGAAGCTACAGCCCTCCCCGACGAGAACCATCCCGCGGAGGAGATAT
CCGCGGAGGGTACTACGACGAATTTCGTCCTCCACTACGCGGTCCAGGTC
CACGTGATTACCACCGTGATCGCGATCGTCTTCCCCGCTCCAGGTCTCGA
GAAAGGTACCCCGCGCATCACATACCTCCCGCCGCCTACGCCTTTGGTCG
AGGTCGCTCACGGTCCCGCAGCCCCGTCCGCAGTCATTATCCCCCCCCTC
TTTCTGCGCCTCCTGTTGCTGTTAACCATGACGATCTATATCGACGTGGT
GGCGGCCGTGACGGACCTCTCTCCCTCCTCCCTCCCCCTCCTGCCTATCA
TGATGACTACGAGTACCGGCGAGGCGGCCGAGGAGAAAGAGGAGGAAGAG
GAGGAGGGCGTTCTCGTTCTCCGCCATCTTCCCGCTATGGAGATCTTCCT
CCCCCTCACTATTCTACTTCGTCTTCGTATCCGTCCCAGCAATATGCACA
CGCGCCGCCGTCGGTTTATCCTGAGTACAGCTCCCACAGGCAGCGAGGAG
GGCCAGGGGAGGATTACAGCTATCATGCCCCTTCCCCTCACTCGCGCTAC
CTTGCTGCTGGTGACCAGTACATTAATCGACGGAGCGATGCAAGTAGCGG
TGCTCTTGGTGATACAGGCGGTGTAAGTGGTGGATTTGCCGGAGGAGGAA
GAGGGAGATACGAGGATTCTCGCGGGGAAGGGCCGCCGCCTCAGTCATCG
GGGTCGTCGTCAACACTCCCTCCTCCACCCCATGGTGGTGTCTATGCAGG
TACTGCCCCTCCGCTCCTCCCATCTGATCCAAGAAAAGGAGGTGGCAGTG
TTGGTGGCAACATTCGTGACCCCCGACGAAGGGATTGGGGACAAGACCGA
CGAGGTGCTGGGGGAGGGGCAGGCGGTGGAGTCTATCGGTAGACAGAGAG
AACTGCTTGATTTCTTGTGCTGTACTGACCAATTCGGATAGTTGTATAGC
CATGAGAGGGTGTGTCGGTATTGGCGCGAAGGGACGACGAGAGGCCTTTA
CAATTAGAGAAAGTTTCAGCCTGCGTAAGGTTTGTTGCGTAGCAAGGCCG
AAGGTTCCTTCACCCTTTTTAAACGAACACGAAAAGCAAAGACAACGTTT
CCAACCGAAAGGCATGCGGTGCAGGCAGGTTCTTCTTCCATCCACGTCGT
GTCGATCCACAGGTCCTTTTCTTTCCCCCCCTTCATCCTCTCGGGTCCTC
CGCTGCGGCTGCCGCACTTTCATCCACTCTTGAATTTCCTCGCTCCATGA
TTCCATCATCACCTTAGATGCACTGTCCTATTCACACCTAATTATGTGTC
CTCTCCGTTATTCCTCCCCGCCCACAGGAGCTAAGAATGACTCCGCAACG
GGCATCGGGGCTACAAAAAGAAGTTCTCAGCCTCTACCGGCAGCTTTTGC
GCGCCGCCCGGCGGAAAGATCCCACCAAAGAGGATGGGGGGACATGGACA
CTTGCCCGTACTCGCTTCCGGGAGGACGCTGGGTCGGTCAAGCGGATGGA
TTTCCAAAAGATTGAGTTTCTGTTGCGCCATGGCCGAAAGCAGCTCAAAT
ACCTGGACATGCCCAGCTTCGTCAAGGGCACTTCCGTCACGCCCTCCTCA
TCGCCATCTAGATGACCGAGAAATGTAGAAAGTACAAGTACATATGCGCG
TTGCCACAGCTAAAGCTTAACTAAGAAAATGGGGT

protein sequence of jgi.p|Nanoce1779_2|624574

>mRNA_726-protein ID=mRNA_726-protein|Name=jgi.p|Nanoce1779_2|624574|organism=Nannochloropsis oceanica|type=polypeptide|length=493bp
MPGTRLFVGNLTSAATAEDLRDLFKEFGPIDRIDMKKEGGFGFVEFIRGR
DGEEALVKAAQSVNGKELHGVTLTVEEAKGPKREGPRPQMQRSEHRVRVE
GMPRGSTWQDLKDFARGSTGLAPLYTEVVRGNPSVGIIEYHRREDMIEAL
RQINNTELRGVMVQVYEDAPSGRGRGDERRRSYSPPRREPSRGGDIRGGY
YDEFRPPLRGPGPRDYHRDRDRLPRSRSRERYPAHHIPPAAYAFGRGRSR
SRSPVRSHYPPPLSAPPVAVNHDDLYRRGGGRDGPLSLLPPPPAYHDDYE
YRRGGRGERGGRGGGRSRSPPSSRYGDLPPPHYSTSSSYPSQQYAHAPPS
VYPEYSSHRQRGGPGEDYSYHAPSPHSRYLAAGDQYINRRSDASSGALGD
TGGVSGGFAGGGRGRYEDSRGEGPPPQSSGSSSTLPPPPHGGVYAGTAPP
LLPSDPRKGGGSVGGNIRDPRRRDWGQDRRGAGGGAGGGVYR*

mRNA from alignment at scaffold_2:292142..298075+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_726 ID=mRNA_726|Name=jgi.p|Nanoce1779_2|624574|organism=Nannochloropsis oceanica|type=mRNA|length=5934bp|location=Sequence derived from alignment at scaffold_2:292142..298075+ (Nannochloropsis oceanica)
GGCTAGACTGTGCTTGACAGCAGCTTCATGCTTTGGTGAATGAATTTTAA
TTTTGTTGAATGCAGATCAAAGACACCATATAAATTTTGTAGTTCCTGCT
TATAATCGTCTTACCTTGACCTTGCCTTTCCAGCCACCTCCCACGCCCGG
TCCCTTGATACCTCTCATAGCCATTTACCCAATACCAGGTACTATGGATC
ATCGGCTCCTCTGAATTTCCTGGAAGCCAGATTCTCTTTTTTCTCAAGAA
GTGGTCGCATCCGGGCAACAATCATTTTGTGCTGCTGCTGCAATTTGCCT
ACCTCAGGCAATTGTTGAGCGTCGGGACGAGTCAAACACGTCCCCCAAGT
GTATTCTAGGCGATTCAAGAGCCACATCCGCCAGTCTGTCTCCTGGCGAC
CAGGCCCCCGGTACCACTGGGATGCAGTGGTGGCAAGGGAAGCATCGTTA
AAGGGACTAACACGGGGCACACGGCGCAATTGAGCCTCGGCGGTCGCCAA
GGAAACCGTGGGGCTGAGGTACAAAAGATGGTAATAGGCCAAGCCCAGGT
TATTTAGTGTGTGTGTCGTGTGCTCAGGGTCATGTGCAACTAGCACTTCA
AGCCACCATGCCGCATCCAAGAAATGCTTCAGCACCAGCGTGGAGGACAT
TTTGGTCGTTGTGGGGCTGTGTGTCATATCGTCGTTGCCTCCTCCCGCAC
TTCTGTTGTAAAGGTTCTGGTGCCCAATCGCTTCGTCGAGCGCGTGCGCC
GCAGTCTCGGCCAAATGATCTAGATAGTCGCGCCTGATTTCATACTCCCA
CTTCCCTCGCTGGTACTTATCAAGGGCAGGGAGCTCCGCAAGTGACAATA
AGTTTTGCGAGTGCTGCTGAAGAAGATGCCATGTTTCAAAGATTCGCTTG
AGCCATTCTTTCATTGTCCACACGTCTTCGCGCCGAAAAAGCTGCATGTT
CAAGCCCATCGGCAGCATTGTAAAGACAGATCGAAGCTGCTCCTCGGTCT
GAGAAAATGTCAGGTTTCCTGCCACAAAAATGCCCCCAACCCGGTCGATA
TTGGCGTCCACAAACTGATGCATGGCAAAAGCCTGGCCTCCGCGCGCCAA
GCAATGATTTTCTGGAACGTGGTGTGTACCGGGAAAAATAACTTTTCCAC
TGTGATGACTGCCCAATGACGGCCACCATGGAAGGCTCATGAGCGACAAC
TTTAGAATCGTCACGTCCAGCCGGTAGTTCTTACAGCTTTGCATGTACCG
CAACGAATTCCATTGCAATTTATGATTTACGAGTAGCAACGAATCCGGCG
GTAAGGGCGCGAGCAAGCTCCGAGCATATTTTTCGGAGTAGGTGTTGGCG
TACTGGCCCGACATCGCAAAGTGCTGCTGAAATTGCCACAAGGCCAGAAC
CACGCATACGGCCTGAGCCAATGAGGCCGTCAGATTAAACGAAAATCGCG
AATCCTGTTGTCTTCCCACCTGCCACTGCCCCCGCGCCACCACACACGAC
AGCCAATCCATACCAACGCCTGCCAACATAAAGACCAACAAGTTAGCTTG
CATCCAGAAGCGCGCCATCATGTTGTAAGACAACTCAACGCTCTCATTCA
GTGGCTCTGGCGAGAAAAAGTCAAAAGCAAACAGAGACAAGACCCAGGCT
CCTCCAAGAGCCCAAATCACGTGGTGACTCTCTTGGCGTGCCTTTGCCTC
GGCTTTGTGGTAGGGACCTTGGCTTCGAGCATCCTTAGTGTGCGTGCATG
GTGGTTGCGGAGCCGGTACATTTGTAAGAATTTGCTGAATATATCCGTCC
GTTGCCCGTGTCACCTTGGCTCGTTCACCCCTGTAGCGCGGAGGTAACAG
GAACGGTGCCGTAAAGACCGTGGCTGCGACATAACCCAACAGCGCCAGCA
GAGGCACCAAACCCCATTGACCCTGACGCAAGATTAGATCCCACGCATAA
GCACCCTGCGAACAGTAAGCTGACTCCCGATAGGTTACATCATCCGGATC
TGAGGCTGGTTGTAAATCAGGGAATTCTCCCTGGCGTAATTGGCTCCATA
TTTCTTGCCATGTTATCATGTTGCCAAGTCTGCCGATTTGAGGGCGCCAC
AAAACACTCAAGAGTGCGTAGACCAATGGAAATAAGCCCAAAATAAACCA
TCTCCCAAGCTCGATGATGATACCGCTCGGCTGCCTCGCCAAGTCGCGCC
GCAGGCACCAGGCCAAATAGAACACAACCGGTACTTCAACAAGAATGGCC
GTATGCTGATTAGCCAGGGCCAGACCACAAAGCAATGTAGTGGTGCAGGC
CCAAAATCGCCTATCCTGAGATGTCCAACTGGAGGCAAAGCGGAGTGTAG
TGTATAGCAGAAGGGCCAGCAGAGCATTGTTCAAAGCAAAGACCTCGGCT
GAAACTGCGTATCGCCATACCAAAGGCGACCACGCAAAAAGCCCTGCACC
CGCAGCCGCAGCCACCAATGTCGTCGTACTTGTCGCTGTTGCAAGGGAAT
CATTGCTCGAAGACATAGAGGGATGATAGCATCGATGCCGCGCCTGCCCA
AACACCACAATGCACAAGAAAAGGCACCCAGCGGCCATAGTCGTGCAAAT
AGCCGAGATTATGTTGGCCTTCCAAGAAGGACTCCCGGCCACAGGCAAGC
ACAGAATCACCAGACGTTGCAGAAGCGTCAAGAGCGGGTATTGTGTTAAT
CGGAGGGTATCCAATCGGCACGCCTCAGCGACAAGCTTCCCGCTATCCCC
GCCAGCAATGACCTCGCCGAGCGTTGTCCAATAACTAGCCATGATTAGAC
CACACGTGACCCAGAGCCATACCCAAGTGACCAAGTCATGTCGGTGGGAT
GGTAGTGACAATGCTCGTGCTGAGACCGATGCGAACAACACTTTGAAACG
ATCTGTCACTTCCTGCGCTTGGGCAGCACGCCGTTCCGCCCGTCGCTGAA
GTTGAGACGGAGGCAACCACCTAGACGACGAGGAAACCCGACGTCTACTG
GTTGTGACAGCAGCCGCTGACAATTTTTCTGCCTCAAAAATAGGCTGCAC
CGGATGCCGGCCGGTGGAACCCTCAAACATTCCTTTGCGGTCTTAGTCTG
GAGTCGGGGTGTAGGAGGAGGGGTAGGAGGGGTGGTTTGGAGCTATCGAT
TGACAGACAAAAGACTAGCACACCGTGTTACACGCACTAAGAGGAGTTAT
AGGCGTGGGTTGTGCTGAGCACCATAGCAGCGCTGACACGAGTAACGAGA
AGGTTCCTTGAGAAGTGGAACGTAACGTGCAGACCGTACGAGAAACACTT
GCTTTCCTCGTTCACTCCTCTATCCCGAGGCAATTTCAAGAATAGCTTCT
CAAGCCAGGCATAATTTTGTTTTCACGCTGTCTGAGATCACCACCACCAC
ATACACTTAAAATTTTGAGCAATAGACATATAGTGAGAGGCAGAGACAGG
ACCGAAGGAGGCAGGACAGACAGCAAGCCAACACAACCACCACGACCACC
AAGAAACCTCACGATGCCGGGCACGCGTCTATTCGTGGGCAATCTTACGT
CCGCCGCCACGGCGGAGGATCTGCGGGACCTGTTTAAGGAATTCGGCCCC
ATTGACCGCATTGATATGAAGAAGGAAGGCGGATTTGGCTTTGTCGAGTT
CATCCGTGGGCGTGACGGAGAAGAGGCTCTAGTGAAGGCCGCCCAGAGCG
TGAACGGCAAGGAGCTGCATGGCGTAACCTTGACGGTAGAGGAGGCGAAA
GGACCGAAGCGCGAAGGTCCCCGCCCACAGATGCAGCGAAGTGAGCACCG
GGTCCGCGTGGAGGGCATGCCACGTGGGAGCACGTGGCAAGACCTAAAGG
ACTTCGCGCGGGGGAGCACGGGCTTAGCTCCTTTGTACACGGAAGTGGTG
CGAGGCAACCCTAGCGTGGGCATCATTGAGTACCATCGACGGGAGGATAT
GATTGAAGCCCTGCGGCAAATCAACAACACTGAACTAAGGGGCGTGATGG
TGCAGGTGTACGAGGTGAGATTGAGAGGGGTAAGGAGGTTGAGGCTCAAC
CACATGGCTTTATGGGAAACAAAGCAAGAATCACCGCGATGAAGAGATGA
AATACGACACACACTCTATCCGTACTAATTCAATTCCATCCTCTTATATG
AAATACTCTTTAGGATGCCCCCTCTGGCCGTGGCCGTGGTGACGAGCGAC
GCCGAAGCTACAGCCCTCCCCGACGAGAACCATCCCGCGGAGGAGATATC
CGCGGAGGGTACTACGACGAATTTCGTCCTCCACTACGCGGTCCAGGTCC
ACGTGATTACCACCGTGATCGCGATCGTCTTCCCCGCTCCAGGTCTCGAG
AAAGGTACCCCGCGCATCACATACCTCCCGCCGCCTACGCCTTTGGTCGA
GGTCGCTCACGGTCCCGCAGCCCCGTCCGCAGTCATTATCCCCCCCCTCT
TTCTGCGCCTCCTGTTGCTGTTAACCATGACGATCTATATCGACGTGGTG
GCGGCCGTGACGGACCTCTCTCCCTCCTCCCTCCCCCTCCTGCCTATCAT
GATGACTACGAGTACCGGCGAGGCGGCCGAGGAGAAAGAGGAGGAAGAGG
AGGAGGGCGTTCTCGTTCTCCGCCATCTTCCCGCTATGGAGATCTTCCTC
CCCCTCACTATTCTACTTCGTCTTCGTATCCGTCCCAGCAATATGCACAC
GCGCCGCCGTCGGTTTATCCTGAGTACAGCTCCCACAGGCAGCGAGGAGG
GCCAGGGGAGGATTACAGCTATCATGCCCCTTCCCCTCACTCGCGCTACC
TTGCTGCTGGTGACCAGTACATTAATCGACGGAGCGATGCAAGTAGCGGT
GCTCTTGGTGATACAGGCGGTGTAAGTGGTGGATTTGCCGGAGGAGGAAG
AGGGAGATACGAGGATTCTCGCGGGGAAGGGCCGCCGCCTCAGTCATCGG
GGTCGTCGTCAACACTCCCTCCTCCACCCCATGGTGGTGTCTATGCAGGT
ACTGCCCCTCCGCTCCTCCCATCTGATCCAAGAAAAGGAGGTGGCAGTGT
TGGTGGCAACATTCGTGACCCCCGACGAAGGGATTGGGGACAAGACCGAC
GAGGTGCTGGGGGAGGGGCAGGCGGTGGAGTCTATCGGTAGACAGAGAGA
ACTGCTTGATTTCTTGTGCTGTACTGACCAATTCGGATAGTTGTATAGCC
ATGAGAGGGTGTGTCGGTATTGGCGCGAAGGGACGACGAGAGGCCTTTAC
AATTAGAGAAAGTTTCAGCCTGCGTAAGGTTTGTTGCGTAGCAAGGCCGA
AGGTTCCTTCACCCTTTTTAAACGAACACGAAAAGCAAAGACAACGTTTC
CAACCGAAAGGCATGCGGTGCAGGCAGGTTCTTCTTCCATCCACGTCGTG
TCGATCCACAGGTCCTTTTCTTTCCCCCCCTTCATCCTCTCGGGTCCTCC
GCTGCGGCTGCCGCACTTTCATCCACTCTTGAATTTCCTCGCTCCATGAT
TCCATCATCACCTTAGATGCACTGTCCTATTCACACCTAATTATGTGTCC
TCTCCGTTATTCCTCCCCGCCCACAGGAGCTAAGAATGACTCCGCAACGG
GCATCGGGGCTACAAAAAGAAGTTCTCAGCCTCTACCGGCAGCTTTTGCG
CGCCGCCCGGCGGAAAGATCCCACCAAAGAGGATGGGGGGACATGGACAC
TTGCCCGTACTCGCTTCCGGGAGGACGCTGGGTCGGTCAAGCGGATGGAT
TTCCAAAAGATTGAGTTTCTGTTGCGCCATGGCCGAAAGCAGCTCAAATA
CCTGGACATGCCCAGCTTCGTCAAGGGCACTTCCGTCACGCCCTCCTCAT
CGCCATCTAGATGACCGAGAAATGTAGAAAGTACAAGTACATATGCGCGT
TGCCACAGCTAAAGCTTAACTAAGAAAATGGGGT

Coding sequence (CDS) from alignment at scaffold_2:292142..298075+

>mRNA_726 ID=mRNA_726|Name=jgi.p|Nanoce1779_2|624574|organism=Nannochloropsis oceanica|type=CDS|length=2958bp|location=Sequence derived from alignment at scaffold_2:292142..298075+ (Nannochloropsis oceanica)
ATGCCGGGCACGCGTCTATTCGTGGGCAATCTTACGTCCGCCGCCACGGC
GGAGGATCTGCGGGACCTGTTTAAGGAATTCGGCCCCATTGACCGCATTG
ATATGAAGAAGGAAGGCGGATTTGGCTTTGTCGAGTTCATCCGTGGGCGT
GACGGAGAAGAGGCTCTAGTGAAGGCCGCCCAGAGCGTGAACGGCAAGGA
GCTGCATGGCGTAACCTTGACGGTAGAGGAGGCGAAAGGACCGAAGCGCG
AAGGTCCCCGCCCACAGATGCAGCGAAGTGAGCACCGGGTCCGCGTGGAG
GGCATGCCACGTGGGAGCACGTGGCAAGACCTAAAGGACTTCGCGCGGGG
GAGCACGGGCTTAGCTCCTTTGTACACGGAAGTGGTGCGAGGCAACCCTA
GCGTGGGCATCATTGAGTACCATCGACGGGAGGATATGATTGAAGCCCTG
CGGCAAATCAACAACACTGAACTAAGGGGCGTGATGGTGCAGGTGTACGA
GGATGCCCCCTCTGGCCGTGGCCGTGGTGACGAGCGACGCCGAAGCTACA
GCCCTCCCCGACGAGAACCATCCCGCGGAGGAGATATCCGCGGAGGGTAC
TACGACGAATTTCGTCCTCCACTACGCGGTCCAGGTCCACGTGATTACCA
CCGTGATCGCGATCGTCTTCCCCGCTCCAGGTCTCGAGAAAGGTACCCCG
CGCATCACATACCTCCCGCCGCCTACGCCTTTGGTCGAGGTCGCTCACGG
TCCCGCAGCCCCGTCCGCAGTCATTATCCCCCCCCTCTTTCTGCGCCTCC
TGTTGCTGTTAACCATGACGATCTATATCGACGTGGTGGCGGCCGTGACG
GACCTCTCTCCCTCCTCCCTCCCCCTCCTGCCTATCATGATGACTACGAG
TACCGGCGAGGCGGCCGAGGAGAAAGAGGAGGAAGAGGAGGAGGGCGTTC
TCGTTCTCCGCCATCTTCCCGCTATGGAGATCTTCCTCCCCCTCACTATT
CTACTTCGTCTTCGTATCCGTCCCAGCAATATGCACACGCGCCGCCGTCG
GTTTATCCTGAGTACAGCTCCCACAGGCAGCGAGGAGGGCCAGGGGAGGA
TTACAGCTATCATGCCCCTTCCCCTCACTCGCGCTACCTTGCTGCTGGTG
ACCAGTACATTAATCGACGGAGCGATGCAAGTAGCGGTGCTCTTGGTGAT
ACAGGCGGTGTAAGTGGTGGATTTGCCGGAGGAGGAAGAGGGAGATACGA
GGATTCTCGCGGGGAAGGGCCGCCGCCTCAGTCATCGGGGTCGTCGTCAA
CACTCCCTCCTCCACCCCATGGTGGTGTCTATGCAGGTACTGCCCCTCCG
CTCCTCCCATCTGATCCAAGAAAAGGAGGTGGCAGTGTTGGTGGCAACAT
TCGTGACCCCCGACGAAGGGATTGGGGACAAGACCGACGAGGTGCTGGGG
GAGGGGCAGGCGGTGGAGTCTATCGGTAGATGCCGGGCACGCGTCTATTC
GTGGGCAATCTTACGTCCGCCGCCACGGCGGAGGATCTGCGGGACCTGTT
TAAGGAATTCGGCCCCATTGACCGCATTGATATGAAGAAGGAAGGCGGAT
TTGGCTTTGTCGAGTTCATCCGTGGGCGTGACGGAGAAGAGGCTCTAGTG
AAGGCCGCCCAGAGCGTGAACGGCAAGGAGCTGCATGGCGTAACCTTGAC
GGTAGAGGAGGCGAAAGGACCGAAGCGCGAAGGTCCCCGCCCACAGATGC
AGCGAAGTGAGCACCGGGTCCGCGTGGAGGGCATGCCACGTGGGAGCACG
TGGCAAGACCTAAAGGACTTCGCGCGGGGGAGCACGGGCTTAGCTCCTTT
GTACACGGAAGTGGTGCGAGGCAACCCTAGCGTGGGCATCATTGAGTACC
ATCGACGGGAGGATATGATTGAAGCCCTGCGGCAAATCAACAACACTGAA
CTAAGGGGCGTGATGGTGCAGGTGTACGAGGATGCCCCCTCTGGCCGTGG
CCGTGGTGACGAGCGACGCCGAAGCTACAGCCCTCCCCGACGAGAACCAT
CCCGCGGAGGAGATATCCGCGGAGGGTACTACGACGAATTTCGTCCTCCA
CTACGCGGTCCAGGTCCACGTGATTACCACCGTGATCGCGATCGTCTTCC
CCGCTCCAGGTCTCGAGAAAGGTACCCCGCGCATCACATACCTCCCGCCG
CCTACGCCTTTGGTCGAGGTCGCTCACGGTCCCGCAGCCCCGTCCGCAGT
CATTATCCCCCCCCTCTTTCTGCGCCTCCTGTTGCTGTTAACCATGACGA
TCTATATCGACGTGGTGGCGGCCGTGACGGACCTCTCTCCCTCCTCCCTC
CCCCTCCTGCCTATCATGATGACTACGAGTACCGGCGAGGCGGCCGAGGA
GAAAGAGGAGGAAGAGGAGGAGGGCGTTCTCGTTCTCCGCCATCTTCCCG
CTATGGAGATCTTCCTCCCCCTCACTATTCTACTTCGTCTTCGTATCCGT
CCCAGCAATATGCACACGCGCCGCCGTCGGTTTATCCTGAGTACAGCTCC
CACAGGCAGCGAGGAGGGCCAGGGGAGGATTACAGCTATCATGCCCCTTC
CCCTCACTCGCGCTACCTTGCTGCTGGTGACCAGTACATTAATCGACGGA
GCGATGCAAGTAGCGGTGCTCTTGGTGATACAGGCGGTGTAAGTGGTGGA
TTTGCCGGAGGAGGAAGAGGGAGATACGAGGATTCTCGCGGGGAAGGGCC
GCCGCCTCAGTCATCGGGGTCGTCGTCAACACTCCCTCCTCCACCCCATG
GTGGTGTCTATGCAGGTACTGCCCCTCCGCTCCTCCCATCTGATCCAAGA
AAAGGAGGTGGCAGTGTTGGTGGCAACATTCGTGACCCCCGACGAAGGGA
TTGGGGACAAGACCGACGAGGTGCTGGGGGAGGGGCAGGCGGTGGAGTCT
ATCGGTAG

Synonyms

Publications