Properties
| Property Name | Value |
|---|
| TranscriptId | 107304 |
| Track | FilteredModels2 |
| ProteinId | 107218 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:566813..567997 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7210 ID=mRNA_7210|Name=jgi.p|Nanoce1779_2|107218|organism=Nannochloropsis oceanica|type=mRNA|length=731bp
CTTTGGCGGTATCGCTGCCGAAGCCGGCCCACCCTCTCAAAAAAGTGTGT
GGTTTGAATGCTGCTGCTCCGAGGAGGAGGAGGGAGGGAGGGAGGGAGGG
GAGATGAGGTGGATGCCATTAAAGTGGCATCTGCCTGGTGGGGTGTTGTA
TGATTTGTTTAAAAGAGGAGGAGGAAGAGGAGCAACAGGAGGGGGAGGAG
GAGGAGGAGGGGGAGAAAGCGATAAATCGAGGGAGGGAGGACAAAAATTG
CCTTGGAGAATAAGGGTGAGGTTTCAGCATCTGCCGCAGGACCAGGTCTT
GGACCTTCCCTTCCCCTCCTCCCCTTCCTCCTCCTCCTATGCCTCCTCGA
TCTCTCTGGCCGTCCAACAACATTTTCGTGGCCGATTGAAACAAGCTTCT
CACCTCCAGCACGGGGGAAGCGGTCCTGCCATGGGTCTGGCAAAAGAAGA
TGAGGTGGCTCTCTGGGAGGCGGTGGCGAGCTCCGACTTTTCCCGCTACC
AAGGCCCAGTCTGGAAGCTCATTGCGTCCAGCGTCTTCCCCTCCGCCTCC
ACATCGGGCGCGATCCCGCTCTCCTTCCCTCCTTCCCGTCCTCCCTCCCG
TCCTCCCCCCCTCCTTCAGACCGCATGACCCTCGGCCAAGCGCTGAGGCT
CGCGGTACCCCATTTATTCCTTTCAGACAAGGAGGGAGGGGGCGAGGGAG
GGAGGGAGGGAGGGAGGGAGAAAGGGCAGGG back to topprotein sequence of jgi.p|Nanoce1779_2|107218 >mRNA_7210-protein ID=mRNA_7210-protein|Name=jgi.p|Nanoce1779_2|107218|organism=Nannochloropsis oceanica|type=polypeptide|length=175bp
MRWMPLKWHLPGGVLYDLFKRGGGRGATGGGGGGGGGESDKSREGGQKLP
WRIRVRFQHLPQDQVLDLPFPSSPSSSSYASSISLAVQQHFRGRLKQASH
LQHGGSGPAMGLAKEDEVALWEAVASSDFSRYQGPVWKLIASSVFPSAST
SGAIPLSFPPSRPPSRPPPLLQTA* back to topmRNA from alignment at scaffold_16:566813..567997+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7210 ID=mRNA_7210|Name=jgi.p|Nanoce1779_2|107218|organism=Nannochloropsis oceanica|type=mRNA|length=1185bp|location=Sequence derived from alignment at scaffold_16:566813..567997+ (Nannochloropsis oceanica)
CTTTGGCGGTATCGCTGCCGAAGCCGGCCCACCCTCTCAAAAAAGTGTGT
GGTTTGAATGCTGCTGCTCCGAGGAGGAGGAGGGAGGGAGGGAGGGAGGG
GAGATGAGGTGGATGCCATTAAAGTGGCATCTGCCTGGTGGGGTGTTGTA
TGATTTGTTTAAAAGAGGAGGAGGAAGAGGAGCAACAGGAGGGGGAGGAG
GAGGAGGAGGGGGAGAAAGCGATAAATCGAGGGAGGGAGGACAAAAATTG
CCTTGGAGAATAAGGGTGAGGTTTCAGCATCTGCCGCAGGACCAGGTAAG
GGTATGAGGGAGGGATGGAAGGAGTGAGGTGTAGGAGGGAAGTGAGGGAG
GGAGAGAGTAAAAGAGAGGAGCGAGGGAGGGGAGGGAGGGACGGAGGGTC
GGGAAGGAGGATGGGAAGGAGGGAGCAGCATCATTGGAAAGCCTGATGTA
TGACGTATCCCCTTCAACTCCATTTGTGTTTTTCATCATTAGGTCTTGGA
CCTTCCCTTCCCCTCCTCCCCTTCCTCCTCCTCCTATGCCTCCTCGATCT
CTCTGGCCGTCCAACAACATTTTCGTGGCCGATTGAAACAAGCTTCTCAC
CTCCAGCACGGGGGAAGCGGTCCTGCCATGGGTCTGGCAAAAGAAGATGA
GGTAGGATTCATACCATCTATTTTCCTCCTCCTCCTCACGTATTTCTTGC
CCTTTCTAATATATTCACACCCATTTCCTACTCTTCCCGATTTAATTTAA
TTACCTCCCGCTCTTTTCTAATATCTTTCCTTCTCCAGGTGGCTCTCTGG
GAGGCGGTGGCGAGCTCCGACTTTTCCCGCTACCAAGGCCCAGTCTGGAA
GCTCATTGCGTCCAGGTACCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTTCTTCCTTCCGTTCCTCACTCACGCATCGTCTATGCTCTTGCTTACC
CTCCCCCCCTCCCTTCCTCCCTCCCTAGACCACAGCGTCTTCCCCTCCGC
CTCCACATCGGGCGCGATCCCGCTCTCCTTCCCTCCTTCCCGTCCTCCCT
CCCGTCCTCCCCCCCTCCTTCAGACCGCATGACCCTCGGCCAAGCGCTGA
GGCTCGCGGTACCCCATTTATTCCTTTCAGACAAGGAGGGAGGGGGCGAG
GGAGGGAGGGAGGGAGGGAGGGAGAAAGGGCAGGG back to topCoding sequence (CDS) from alignment at scaffold_16:566813..567997+ >mRNA_7210 ID=mRNA_7210|Name=jgi.p|Nanoce1779_2|107218|organism=Nannochloropsis oceanica|type=CDS|length=2100bp|location=Sequence derived from alignment at scaffold_16:566813..567997+ (Nannochloropsis oceanica)
ATGAGGTGGATGCCATTAAAGTGGCATCTGCCTGGTGGGGTGTTGTATGA
TTTGTTTAAAAGAGGAGGAGGAAGAGGAGCAACAGGAGGGGGAGGAGGAG
GAGGAGGGGGAGAAAGCGATAAATCGAGGGAGGGAGGACAAAAATTGCCT
TGGAGAATAAGGGTGAGGTTTCAGCATCTGCCGCAGGACCAGGTCTTGGA
CCTTCCCTTCCCCTCCTCCCCTTCCTCCTCCTCCTATGCCTCCTCGATCT
CTCTGGCCGTCCAACAACATTTTCGTGGCCGATTGAAACAAGCTTCTCAC
CTCCAGCACGGGGGAAGCGGTCCTGCCATGGGTCTGGCAAAAGAAGATGA
GGTGGCTCTCTGGGAGGCGGTGGCGAGCTCCGACTTTTCCCGCTACCAAG
GCCCAGTCTGGAAGCTCATTGCGTCCAGCGTCTTCCCCTCCGCCTCCACA
TCGGGCGCGATCCCGCTCTCCTTCCCTCCTTCCCGTCCTCCCTCCCGTCC
TCCCCCCCTCCTTCAGACCGCATGAATGAGGTGGATGCCATTAAAGTGGC
ATCTGCCTGGTGGGGTGTTGTATGATTTGTTTAAAAGAGGAGGAGGAAGA
GGAGCAACAGGAGGGGGAGGAGGAGGAGGAGGGGGAGAAAGCGATAAATC
GAGGGAGGGAGGACAAAAATTGCCTTGGAGAATAAGGGTGAGGTTTCAGC
ATCTGCCGCAGGACCAGGTCTTGGACCTTCCCTTCCCCTCCTCCCCTTCC
TCCTCCTCCTATGCCTCCTCGATCTCTCTGGCCGTCCAACAACATTTTCG
TGGCCGATTGAAACAAGCTTCTCACCTCCAGCACGGGGGAAGCGGTCCTG
CCATGGGTCTGGCAAAAGAAGATGAGGTGGCTCTCTGGGAGGCGGTGGCG
AGCTCCGACTTTTCCCGCTACCAAGGCCCAGTCTGGAAGCTCATTGCGTC
CAGCGTCTTCCCCTCCGCCTCCACATCGGGCGCGATCCCGCTCTCCTTCC
CTCCTTCCCGTCCTCCCTCCCGTCCTCCCCCCCTCCTTCAGACCGCATGA
ATGAGGTGGATGCCATTAAAGTGGCATCTGCCTGGTGGGGTGTTGTATGA
TTTGTTTAAAAGAGGAGGAGGAAGAGGAGCAACAGGAGGGGGAGGAGGAG
GAGGAGGGGGAGAAAGCGATAAATCGAGGGAGGGAGGACAAAAATTGCCT
TGGAGAATAAGGGTGAGGTTTCAGCATCTGCCGCAGGACCAGGTCTTGGA
CCTTCCCTTCCCCTCCTCCCCTTCCTCCTCCTCCTATGCCTCCTCGATCT
CTCTGGCCGTCCAACAACATTTTCGTGGCCGATTGAAACAAGCTTCTCAC
CTCCAGCACGGGGGAAGCGGTCCTGCCATGGGTCTGGCAAAAGAAGATGA
GGTGGCTCTCTGGGAGGCGGTGGCGAGCTCCGACTTTTCCCGCTACCAAG
GCCCAGTCTGGAAGCTCATTGCGTCCAGCGTCTTCCCCTCCGCCTCCACA
TCGGGCGCGATCCCGCTCTCCTTCCCTCCTTCCCGTCCTCCCTCCCGTCC
TCCCCCCCTCCTTCAGACCGCATGAATGAGGTGGATGCCATTAAAGTGGC
ATCTGCCTGGTGGGGTGTTGTATGATTTGTTTAAAAGAGGAGGAGGAAGA
GGAGCAACAGGAGGGGGAGGAGGAGGAGGAGGGGGAGAAAGCGATAAATC
GAGGGAGGGAGGACAAAAATTGCCTTGGAGAATAAGGGTGAGGTTTCAGC
ATCTGCCGCAGGACCAGGTCTTGGACCTTCCCTTCCCCTCCTCCCCTTCC
TCCTCCTCCTATGCCTCCTCGATCTCTCTGGCCGTCCAACAACATTTTCG
TGGCCGATTGAAACAAGCTTCTCACCTCCAGCACGGGGGAAGCGGTCCTG
CCATGGGTCTGGCAAAAGAAGATGAGGTGGCTCTCTGGGAGGCGGTGGCG
AGCTCCGACTTTTCCCGCTACCAAGGCCCAGTCTGGAAGCTCATTGCGTC
CAGCGTCTTCCCCTCCGCCTCCACATCGGGCGCGATCCCGCTCTCCTTCC
CTCCTTCCCGTCCTCCCTCCCGTCCTCCCCCCCTCCTTCAGACCGCATGA back to top
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