jgi.p|Nanoce1779_2|530544, mRNA_7195 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|530544
Unique NamemRNA_7195
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length153
Alignment locationscaffold_16:526576..526728 +

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Properties
Property NameValue
TranscriptId530630
TrackFilteredModels2
ProteinId530544
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_16supercontigscaffold_16:526576..526728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|530544gene_7195Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|530544mRNA_7195-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_7195CDS_7195Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_7195 ID=mRNA_7195|Name=jgi.p|Nanoce1779_2|530544|organism=Nannochloropsis oceanica|type=mRNA|length=153bp
CAGGGTGAGAATGCCCGGATGTCCTCCTTCATTGGCGCGATCGCTATTGC
TGACCTGGTCAAGACCACGCTGGGGCCGAAAGGGATGGATAAAATCCTCC
AGTCGGTCGGGTCGTCGGATGGGGCAGTGACGGTATGGAGGAAGGGAGGG
TAG
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protein sequence of jgi.p|Nanoce1779_2|530544

>mRNA_7195-protein ID=mRNA_7195-protein|Name=jgi.p|Nanoce1779_2|530544|organism=Nannochloropsis oceanica|type=polypeptide|length=51bp
QGENARMSSFIGAIAIADLVKTTLGPKGMDKILQSVGSSDGAVTVWRKGG
*
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mRNA from alignment at scaffold_16:526576..526728+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_7195 ID=mRNA_7195|Name=jgi.p|Nanoce1779_2|530544|organism=Nannochloropsis oceanica|type=mRNA|length=153bp|location=Sequence derived from alignment at scaffold_16:526576..526728+ (Nannochloropsis oceanica)
CAGGGTGAGAATGCCCGGATGTCCTCCTTCATTGGCGCGATCGCTATTGC
TGACCTGGTCAAGACCACGCTGGGGCCGAAAGGGATGGATAAAATCCTCC
AGTCGGTCGGGTCGTCGGATGGGGCAGTGACGGTATGGAGGAAGGGAGGG
TAG
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Coding sequence (CDS) from alignment at scaffold_16:526576..526728+

>mRNA_7195 ID=mRNA_7195|Name=jgi.p|Nanoce1779_2|530544|organism=Nannochloropsis oceanica|type=CDS|length=153bp|location=Sequence derived from alignment at scaffold_16:526576..526728+ (Nannochloropsis oceanica)
CAGGGTGAGAATGCCCGGATGTCCTCCTTCATTGGCGCGATCGCTATTGC
TGACCTGGTCAAGACCACGCTGGGGCCGAAAGGGATGGATAAAATCCTCC
AGTCGGTCGGGTCGTCGGATGGGGCAGTGACGGTATGGAGGAAGGGAGGG
TAG
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Synonyms
Publications