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Properties
| Property Name | Value |
|---|
| TranscriptId | 596029 |
| Track | FilteredModels2 |
| ProteinId | 595943 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:497440..499015 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7187 ID=mRNA_7187|Name=jgi.p|Nanoce1779_2|595943|organism=Nannochloropsis oceanica|type=mRNA|length=1576bp
ATCCCTCGCACCCTTGCTGCTCCCTCTTCCCCACTGCCTGCCTCCTCCAA
GGAAGAGGAGGAAGAGGAGGAAGAGGAGGAGGAGGAGGGAGGACCTTGTG
CTAAATTATGATGGTTTAAATGCTGCAGCTGCAGAGGATTTGTGCTACTC
CCTCGCCGCCCATGGTGAAAAGATGGGGAGACAGACGTGCACGACCCTGA
CGGCGGCAAGGACGAGGGGGAGGACGGTCTCATCCTTCCCCGACCACCCT
TCAGGTACGTGGGCTCCAAGTGAAACTGAGGTGGCGTCCCTCCTCCTCCT
CCTCCCCCCCCCCCCTCCCCCTTCTCTTTCTTCCGGTGATTGTGTGGCGG
AGGCGAAGGTAATCCGAGGGGAGGTCATGTTAAATTGAGGCTGAGCATTA
AGTGCGGCTCTGGCCTGTGAGCCCCTGCGACGTGAGTAGTGGTAGGCGAG
CGCCACCAGACACCCACCAATCAGGAAGAAGGATCCGACACTGCTCAGGT
ATGTCCAACTGACACCCTCACTTTTTTCTTGGGCAACGTCGGTGCCGGAG
AGAATATCAATGCCGTCGCTGCTGCTGCTACTGTCGTTGGGATCACCGTG
ATCGTTGGCGTCCCGGGCATCCGTACCATTCCCTCCCTCCTCCTTATCTG
CGGTAGCAATGTCCTCCTGTAGCTTAAGTAGGACCGCGTCATCTTCTCTT
TCTCCCTCCCCATTCACTAACAAGGGACCTTTTCCATTATAGAGGATGTA
ATCAGGCGTTGGAATAGCGATGGCAGGAACGCTAATGTTGCTGCTGCTCC
TGCTGCTATTGTTGCTACCGTCGCTGGTTTCGGACAGAAATGGCTTTTCT
TCTTTAATCTCCCTGTCCGAAAAAGCACGATCTTCTCTTACTTTTCTTCC
GTCTTCATGTTCTTCGTCCTGCGGCAAGGGCTCGGGCATTGGCCCGTCGA
GAGACGCGTCGTCGTCATCAGGCTTGACAGAGTCATCCTCCTCCTCTTCC
TCCTCCTTCATGGCCCTGTCACTCCCCATTGACCCAGCAAGAATAGGAGC
GGATGCTTTCTCTGCATTATCTTCCTCCACGAATTCGTCCCCTTCGTCTC
CAGGGGGAGGGGGGGTAGGGAAAAGATCGTCCGTCAGGGGCTCAGGCTCG
CTTAGGACGGCCCGCTCTTCCACGACGCCTCCCAAATCCAAATTAACGTG
TCCTCCTCCTCCTTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTGCCTGTA
GCTCCTTGCGGTAGCGTCGGTGCAGGACCCTGTGGCGTGGCTCATAGGAT
CGCCCCTGTACTCGGGTCGCTTTATTCTTCTTGCTCGTGAGGGCATGTCG
TTGCTGTCCCTGGGATACTTGAGCGTGGGCATCGGCGGTCGAAATGCAGG
CGACAAGTAAGAGGAGGATGATGAACTTGACCAGGCAAAGAAGACGGGGA
CGACGCGCATGAGAAAAGGAGGAGGGGGACGAGGAAAAGGAGCAGGAGGA
GGAGGATGGTGGCAGGACCATGACGTCCCTGAGCGATTGCTCTTTGAGCT
CGACTGAAGGGGGATTGCCTGTCGTT back to topprotein sequence of jgi.p|Nanoce1779_2|595943 >mRNA_7187-protein ID=mRNA_7187-protein|Name=jgi.p|Nanoce1779_2|595943|organism=Nannochloropsis oceanica|type=polypeptide|length=165bp
MAGTLMLLLLLLLLLLPSLVSDRNGFSSLISLSEKARSSLTFLPSSCSSS
CGKGSGIGPSRDASSSSGLTESSSSSSSSFMALSLPIDPARIGADAFSAL
SSSTNSSPSSPGGGGVGKRSSVRGSGSLRTARSSTTPPKSKLTCPPPPCR
CCCCCCCCACSSLR* back to topmRNA from alignment at scaffold_16:497440..499015+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7187 ID=mRNA_7187|Name=jgi.p|Nanoce1779_2|595943|organism=Nannochloropsis oceanica|type=mRNA|length=1576bp|location=Sequence derived from alignment at scaffold_16:497440..499015+ (Nannochloropsis oceanica)
ATCCCTCGCACCCTTGCTGCTCCCTCTTCCCCACTGCCTGCCTCCTCCAA
GGAAGAGGAGGAAGAGGAGGAAGAGGAGGAGGAGGAGGGAGGACCTTGTG
CTAAATTATGATGGTTTAAATGCTGCAGCTGCAGAGGATTTGTGCTACTC
CCTCGCCGCCCATGGTGAAAAGATGGGGAGACAGACGTGCACGACCCTGA
CGGCGGCAAGGACGAGGGGGAGGACGGTCTCATCCTTCCCCGACCACCCT
TCAGGTACGTGGGCTCCAAGTGAAACTGAGGTGGCGTCCCTCCTCCTCCT
CCTCCCCCCCCCCCCTCCCCCTTCTCTTTCTTCCGGTGATTGTGTGGCGG
AGGCGAAGGTAATCCGAGGGGAGGTCATGTTAAATTGAGGCTGAGCATTA
AGTGCGGCTCTGGCCTGTGAGCCCCTGCGACGTGAGTAGTGGTAGGCGAG
CGCCACCAGACACCCACCAATCAGGAAGAAGGATCCGACACTGCTCAGGT
ATGTCCAACTGACACCCTCACTTTTTTCTTGGGCAACGTCGGTGCCGGAG
AGAATATCAATGCCGTCGCTGCTGCTGCTACTGTCGTTGGGATCACCGTG
ATCGTTGGCGTCCCGGGCATCCGTACCATTCCCTCCCTCCTCCTTATCTG
CGGTAGCAATGTCCTCCTGTAGCTTAAGTAGGACCGCGTCATCTTCTCTT
TCTCCCTCCCCATTCACTAACAAGGGACCTTTTCCATTATAGAGGATGTA
ATCAGGCGTTGGAATAGCGATGGCAGGAACGCTAATGTTGCTGCTGCTCC
TGCTGCTATTGTTGCTACCGTCGCTGGTTTCGGACAGAAATGGCTTTTCT
TCTTTAATCTCCCTGTCCGAAAAAGCACGATCTTCTCTTACTTTTCTTCC
GTCTTCATGTTCTTCGTCCTGCGGCAAGGGCTCGGGCATTGGCCCGTCGA
GAGACGCGTCGTCGTCATCAGGCTTGACAGAGTCATCCTCCTCCTCTTCC
TCCTCCTTCATGGCCCTGTCACTCCCCATTGACCCAGCAAGAATAGGAGC
GGATGCTTTCTCTGCATTATCTTCCTCCACGAATTCGTCCCCTTCGTCTC
CAGGGGGAGGGGGGGTAGGGAAAAGATCGTCCGTCAGGGGCTCAGGCTCG
CTTAGGACGGCCCGCTCTTCCACGACGCCTCCCAAATCCAAATTAACGTG
TCCTCCTCCTCCTTGTCGTTGTTGTTGTTGTTGTTGTTGTTGTGCCTGTA
GCTCCTTGCGGTAGCGTCGGTGCAGGACCCTGTGGCGTGGCTCATAGGAT
CGCCCCTGTACTCGGGTCGCTTTATTCTTCTTGCTCGTGAGGGCATGTCG
TTGCTGTCCCTGGGATACTTGAGCGTGGGCATCGGCGGTCGAAATGCAGG
CGACAAGTAAGAGGAGGATGATGAACTTGACCAGGCAAAGAAGACGGGGA
CGACGCGCATGAGAAAAGGAGGAGGGGGACGAGGAAAAGGAGCAGGAGGA
GGAGGATGGTGGCAGGACCATGACGTCCCTGAGCGATTGCTCTTTGAGCT
CGACTGAAGGGGGATTGCCTGTCGTT back to topCoding sequence (CDS) from alignment at scaffold_16:497440..499015+ >mRNA_7187 ID=mRNA_7187|Name=jgi.p|Nanoce1779_2|595943|organism=Nannochloropsis oceanica|type=CDS|length=495bp|location=Sequence derived from alignment at scaffold_16:497440..499015+ (Nannochloropsis oceanica)
ATGGCAGGAACGCTAATGTTGCTGCTGCTCCTGCTGCTATTGTTGCTACC
GTCGCTGGTTTCGGACAGAAATGGCTTTTCTTCTTTAATCTCCCTGTCCG
AAAAAGCACGATCTTCTCTTACTTTTCTTCCGTCTTCATGTTCTTCGTCC
TGCGGCAAGGGCTCGGGCATTGGCCCGTCGAGAGACGCGTCGTCGTCATC
AGGCTTGACAGAGTCATCCTCCTCCTCTTCCTCCTCCTTCATGGCCCTGT
CACTCCCCATTGACCCAGCAAGAATAGGAGCGGATGCTTTCTCTGCATTA
TCTTCCTCCACGAATTCGTCCCCTTCGTCTCCAGGGGGAGGGGGGGTAGG
GAAAAGATCGTCCGTCAGGGGCTCAGGCTCGCTTAGGACGGCCCGCTCTT
CCACGACGCCTCCCAAATCCAAATTAACGTGTCCTCCTCCTCCTTGTCGT
TGTTGTTGTTGTTGTTGTTGTTGTGCCTGTAGCTCCTTGCGGTAG back to top
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