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Properties
Property Name | Value |
TranscriptId | 631790 |
Track | FilteredModels2 |
ProteinId | 631704 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_16 | supercontig | scaffold_16:454409..458527 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7174 ID=mRNA_7174|Name=jgi.p|Nanoce1779_2|631704|organism=Nannochloropsis oceanica|type=mRNA|length=2337bp GCAGCATCAGCACCAGCAGCAGCAGCAGCGTTATGCCCAAGCAAAACGAA GCGTACACGTACCCTCAGTCGACAACTGGATCCCTTCCTAAAGGCCACCC GTCTTCTTTCCTCCTTCCCTCCCTCTTCCTCCTCCTTCTTCCCCTCGTCC TCCTCTTCGTCCTCTGTCTGTGAAGGCAGTCTTTCTACCTCCACGCCTAC CATTTGACTGACCTCACAGTTATCACTCCCATGGTCCAGCACACTGAAGC GCACCGGCAGCCAACCCCCTCCGCCCTTCCCTTCATCCCTCTCTCCCTCA TTCTCCTCCATCATCGGAAAGTCCGTCCGTCGCCACAAACCGAACTCATT GGCCAAAAACACCGACATCTCAATCCACTCCCCCCAGCACACACCTTCCC TCCCTCCTTCCCTCCCTGCCAGCGGGGCGTCGCGGAAAGAGAGACGCAAG GTCTGTGCCTCGTCCACTAACCCCTCTGCTTCCACTGCTGCTGCATCGCG TGCTGCAGGCGTGGCAGACAATTGCGTTAAGTGCCTTGCTTGTGCCCGGA GAGCGTGCAATGACTTGAGGAAGGAGGGAGGGAGGGAAGACGAGGAGGAG GCGAGGGCATGGTTGAGCACACGGTGGGCGGTGGTGAAACGCTCACGGGC AAGAAGGGCCGTGGCACGGCGGATAGAGGCTTTGGTATTGTGGGGATCGA GACGAAGAGCAGCGGCGGCATCCAGGTCAGCGAGGACATATTCTCGAAGT TGAAGCTGGGCTTGGGCTCGGTTGGAGAGAAGGATGGATGCAATGCTGGT GTTGCCCGTGGTAGTCGTGGCAGTGACACTTACGTTGCTGCCTTGAATGG TTGCGGTGGTGACAGACAGAGCCTCGGTCCAGGCAATGATGGCTTCTGAG TACCGGCCTATATATATTTAGGTCCCGTGGGGAGGAGGGGGAAGAGATGA AATAGACAGGGACTACTGCTCAAGCGTGCGGGTTGAAAAAGGTCTCGGCA AAGATTTTAAATAGCCAACATTAAGAGAGGTACCAAAATTGCTATATTGG ATTCTCTATAGCCAACTTTCACTGTGCGTCCTGTGGGAGGCCATGCTCTC CTACGCCCCACGTCCTAGTGAAACCACGTACCTTGCTTATAACTTGTGTT TCCTCTTTCCCGCAGCGCGTCCAGCACCACGGCGGGATCCTCATCGTTGT CCTTCTGGTCGTTTACCATGCTGCTGTGGACAAGCGTTGTAGTGTGCTGA GTTTGAGTTATGGGGTGGGGAGGTCTTAAAAGCAGAAAACTAGCGATTTT GCGTCCCGTCGTATCCACACATACATAGCACCATGTTGCCTTCTTTCCTT CCTTTCCTGTCATTTATCACTCAACTGCCTCCACGCCATACCATACATCA TCAGACAGAAGTACTCTCTACCGCAGGGACGAGCTTCTAGCTAGGGCGTG GTTGGAATTTGCCTCACACCAGAGCGCGCAAATACAGTAGCGGCCTTCGT CCAGTCGAGGCACCTAGCAACCACATTTTCATTGCCTCGCCCTGTCTTAC GATGGCGGACACTAATGGCGCACATGCGCCCACCGAGGAGGAGCAGCTTC TGGAGGGCCATCAGGAGGAAGGGGAGGAGGAGTCAACTGCGACCACTGGC GGAGGGGAAGAATTGGAAGGGTCCGAGCCTGCCGCTCCTGCCAAACGCCA GCGGGAGGAAGACATGGAGCAGCAGAATCTAGAAGAGGATAGGGGGGGAG ATGGGAAGCGAAACGAAGAAGACGCTGCCGGCACCACCGAGGAGTCGCAC CCACAAGCCACGGAAGGCGGGAGGAGGCCCAAAAAGCAAGCGACGGACGC CGGCCGGGAGGGCGACGCAGACAGCAACATAGCCTTTGCCAAGACGCATC AACACACGGAGACCCTCGAGGTCGCCAAGGACGTAGTGGGGCGAATTATT GGCAAGGGAGGAGAGACAATCCGTGACATCCAAACTCGTTCTGGGTGCCA GTGTGTGATCGACCAGAACGTCCCCGACAATGAGCCACGCATCCTCACAA TCGTGGGCAAGCCTGAAAATGTCGCCAATGCGATCAAGATGGTCGAGGCG GTGAAGGAAGGGGGGCCTTCGATGCTGGCAGACTTCCCGGAGGTGGCTGG GAACGTGAGGGCAACTGTAGATTGCCCGCGGGCGATAGTGGGGAGGTTGA TAGGAAAAGGCGGCGACATCATTCGCGAGATCCAATATAAATCCAAAGCC GTCATTCAGATCAATCAGAAGCTGCCACACGAGCAACCGTGCAAGGTCAC CATCACCGGCGCGCCCAAGGCAGTTCAGACAGGATAA back to topprotein sequence of jgi.p|Nanoce1779_2|631704 >mRNA_7174-protein ID=mRNA_7174-protein|Name=jgi.p|Nanoce1779_2|631704|organism=Nannochloropsis oceanica|type=polypeptide|length=262bp MADTNGAHAPTEEEQLLEGHQEEGEEESTATTGGGEELEGSEPAAPAKRQ REEDMEQQNLEEDRGGDGKRNEEDAAGTTEESHPQATEGGRRPKKQATDA GREGDADSNIAFAKTHQHTETLEVAKDVVGRIIGKGGETIRDIQTRSGCQ CVIDQNVPDNEPRILTIVGKPENVANAIKMVEAVKEGGPSMLADFPEVAG NVRATVDCPRAIVGRLIGKGGDIIREIQYKSKAVIQINQKLPHEQPCKVT ITGAPKAVQTG* back to topmRNA from alignment at scaffold_16:454409..458527+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7174 ID=mRNA_7174|Name=jgi.p|Nanoce1779_2|631704|organism=Nannochloropsis oceanica|type=mRNA|length=4119bp|location=Sequence derived from alignment at scaffold_16:454409..458527+ (Nannochloropsis oceanica) GCAGCATCAGCACCAGCAGCAGCAGCAGCGTTATGCCCAAGCAAAACGAA
GCGTACACGTACCCTCAGTCGACAACTGGATCCCTTCCTAAAGGCCACCC
GTCTTCTTTCCTCCTTCCCTCCCTCTTCCTCCTCCTTCTTCCCCTCGTCC
TCCTCTTCGTCCTCTGTCTGTGAAGGCAGTCTTTCTACCTCCACGCCTAC
CATTTGACTGACCTCACAGTTATCACTCCCATGGTCCAGCACACTGAAGC
GCACCGGCAGCCAACCCCCTCCGCCCTTCCCTTCATCCCTCTCTCCCTCA
TTCTCCTCCATCATCGGAAAGTCCGTCCGTCGCCACAAACCGAACTCATT
GGCCAAAAACACCGACATCTCAATCCACTCCCCCCAGCACACACCTTCCC
TCCCTCCTTCCCTCCCTGCCAGCGGGGCGTCGCGGAAAGAGAGACGCAAG
GTCTGTGCCTCGTCCACTAACCCCTCTGCTTCCACTGCTGCTGCATCGCG
TGCTGCAGGCGTGGCAGACAATTGCGTTAAGTGCCTTGCTTGTGCCCGGA
GAGCGTGCAATGACTTGAGGAAGGAGGGAGGGAGGGAAGACGAGGAGGAG
GCGAGGGCATGGTTGAGCACACGGTGGGCGGTGGTGAAACGCTCACGGGC
AAGAAGGGCCGTGGCACGGCGGATAGAGGCTTTGGTATTGTGGGGATCGA
GACGAAGAGCAGCGGCGGCATCCAGGTCAGCGAGGACATATTCTCGAAGT
TGAAGCTGGGCTTGGGCTCGGTTGGAGAGAAGGATGGATGCAATGCTGGT
GTTGCCCGTGGTAGTCGTGGCAGTGACACTTACGTTGCTGCCTTGAATGG
TTGCGGTGGTGACAGACAGAGCCTCGGTCCAGGCAATGATGGCTTCTGAG
TACCGGCCTATATATATTTAGGTCCCGTGGGGAGGAGGGGGAAGAGATGA
AATAGACAGGGACTACTGCTCAAGCGTGCGGGTTGAAAAAGGTCTCGGCA
AAGATTTTAAATAGCCAACATTAAGAGAGGTACCAAAATTGCTATATTGG
ATTCTCTATAGCCAACTTTCACTGTGCGTCCTGTGGGAGGCCATGCTCTC
CTACGCCCCACGTCCTAGTGAAACCACGTACCTTGCTTATAACTTGTGTT
TCCTCTTTCCCGCAGCGCGTCCAGCACCACGGCGGGATCCTCATCGTTGT
CCTTCTGGTCGTTTACCATGCTGCTGTGGACAAGCGTTGTAGTGTGCTGA
GTTTGAGTTATGGGGTGGGGAGGTCTTAAAAGCAGAAAACTAGCGATTTT
GCGTCCCGTCGTATCCACACATACATAGCACCATGTTGCCTTCTTTCCTT
CCTTTCCTGTCATTTATCACTCAACTGCCTCCACGCCATACCATACATCA
TCAGACAGAAGTACTCTCTACCGCAGGGACGAGCTTCTAGCTAGGGCGTG
GTTGGAATTTGCCTCACACCAGAGCGCGCAAATACAGTAGCGGCCTTCGT
CCAGTCGAGGCACCTAGCAACCACATTTTCATTGCCTCGCCCTGTCTTAC
GATGGCGGACACTAATGGCGCACATGCGCCCACCGAGGAGGAGCAGCTTC
TGGAGGGCCATCAGGAGGAAGGGGAGGAGGAGTCAACTGCGACCACTGGC
GGAGGGGAAGAATTGGAAGGGTCCGAGCCTGCCGCTCCTGCCAAACGCCA
GCGGGAGGAAGACATGGAGCAGCAGAATCTAGAAGAGGATAGGGGGGGAG
ATGGGAAGCGAAACGAAGAAGACGCTGCCGGCACCACCGAGGAGTCGCAC
CCACAAGCCACGGAAGGCGGGAGGAGGCCCAAAAAGCAAGCGACGGACGC
CGGCCGGGAGGGCGACGCAGACAGCAACATAGCCTTTGCCAAGACGCATC
AACACACGGAGACCCTCGAGGTCGCCAAGGACGTAGTGGGGCGAATTATT
GGCAAGGGAGGAGAGACAATCCGTGACATCCAAACTCGTTCTGGGTGCCA
GGTGCGCACTGCAGTCCCTCCGTCATTCCCTCTTTATCTCCCTCTCTCCC
TCCCTCCCTCCTCCCTCTTTCTTGCGATGAAAGATAAGTTAGCTGTGTAA
GAAATCTCGACTTCGAATGGTCTCGAATCACACGTACTCTTTCCCAAAAA
CATCCTTTCATTTATATGAAACGTACAGTGTGTGATCGACCAGAACGTCC
CCGACAATGAGCCACGCATCCTCACAATCGTGGGCAAGCCTGAAAATGTC
GCCAATGCGATCAAGATGGTCGAGGCGGTGAAGGAAGGGGGGCCTTCGAT
GCTGGCAGACTTCCCGGAGGTGGCTGGGAACGTGAGGGCAACTGTAGATT
GCCCGCGGGCGATAGTGGGGAGGTTGATAGGAAAAGGCGGCGACATCATT
CGGTACGTCCTTCACTCCCCCAATCGACCTTTCACTTGATCCATTCACCC
ATCCACCTGCTTGTCTCATTCCCGCATCCTTGCGTATGTCGCGGTCATAT
CCTGGCATTCGATCCGATCCCGCGGACGGCCTTGTGTGGGGCTGGTGGGT
CTTGCATCCACTCACCTTTCCCTCCCTCACTCCCTCCCTCTCTCCCCCAC
AGCGAGATCCAATATAAATCCAAAGCCGTCATTCAGATCAATCAGAAGCT
GCCACACGAGCAACCGTGCAAGGTCACCATCACCGGCGCGCCCAAGGCAG
TTCAGACAGGTCCGTATGTGCCCATTTCCTCTTCTTCCCTCCTTCCCTCC
TTCCCTCCATACCAGCACTATCATATCTGTTTTCCCTTCCGTCTCCTCCT
CTCGTCTCCATTGTTTATAGCTCCCTGCACCCATCATTGTCACGTTATAA
CCCTCCTCCCAACACTCCCTTCTGCCCCTCCCTCCCTCCCTCCTCTCTTA
GCCCGGGAGATCATAATCGCCATCATGGAGCAGGGTGTCCAGGCCATCCA
TCTCTTCCCAGGCGGAACCGCCCCGAGCAATAGCGGCAGCAATTTCTTCA
GCGGGGGTGACAGGGGAGGAGGGGGAGGGTGGGAGGGAGGGAGGGGGGGA
GGAGGCGGCGGCGGAGGAGGAGGAGGATCGAGGTTGTACACCATCCCTAT
CGAAGGAATGGCGTCTGCGATTGACGTCCCGAAAAGCCAGGTGGGAAAAA
TCATTGGAAAAGGAGGGGAAATTGTCGGGCTGATTCAAGAGAAGAGTGGC
TGCCGGCTGCAGATAGCTCAGGACGTTCCTGAGGGGATGCCATGCCGCGT
GGCGATACTGGGGGGGAGGGAGGGAGGGGCGGCGTATGTGTGTGAGATCA
TTCAGGCGATCATTGATAGGGGCCCTCCGTGCGTGCATGACTTTCCCCCC
TTTGAGGGGGTAGGGCGGGGGGCAGGGAGGGGGGGAGTGGGGGAGGGGGG
AGGGTATGGAAGGGGAGGGGGGGGGGGGGGGAGGGGATGGGGAGGGAGGG
AGAGAGAAGCACCGCCACAGTACACCGGAGGGAGAGATCTGGCGGGAGGG
GGCGGGGGAGGAGGATGGGGGGGAGGAGGATGGGCGGGAGGAGGGGGAAG
GGGAGGGGGGGGTTACCATGGAGGGGGAGGGTCAGGGCCTTATGGAGGGG
GAGGGGGAGGGTGGGGAGGAGGAGGAGGAGGGGGAAGCTATCAGCAGTAT
CAGCAGTACCAGCAGCAGATACCAGCAACGATGATGCAGCAGCCGCTGCT
ACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTGGCAGCAAGGAGGAGTAA
GAGGGGGGGCTTATGCGGCTGCTCCTGCTGTGGCGGGTGCTGCTGTTTCT
GGAGGCAGGGCAGGAGGAGGAGGAGGAGGAGGGGGAGGGGGTGGGGGAGG
CGCCCAATCTGGGTGGAGAGAGTGTAAGGCAGCGGATGGGACTCCATATT
GGTACAACGCTGCAAGTGGCGTGTCGCAATGGCATCGGCCTTAATAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGCGTGGTGGTGGTGGT
TATGGGTTGATTCTTGCGACGGAGTGTCGCAGCGACATGGGACAAAGGAA
GGGATGGGGGGGGGACGGGGAGGGAAGGAAGGAGGGATTAATGTCGTAGT
GGCGTTGCCCGTAGGATAA back to topCoding sequence (CDS) from alignment at scaffold_16:454409..458527+ >mRNA_7174 ID=mRNA_7174|Name=jgi.p|Nanoce1779_2|631704|organism=Nannochloropsis oceanica|type=CDS|length=3144bp|location=Sequence derived from alignment at scaffold_16:454409..458527+ (Nannochloropsis oceanica) ATGGCGGACACTAATGGCGCACATGCGCCCACCGAGGAGGAGCAGCTTCT GGAGGGCCATCAGGAGGAAGGGGAGGAGGAGTCAACTGCGACCACTGGCG GAGGGGAAGAATTGGAAGGGTCCGAGCCTGCCGCTCCTGCCAAACGCCAG CGGGAGGAAGACATGGAGCAGCAGAATCTAGAAGAGGATAGGGGGGGAGA TGGGAAGCGAAACGAAGAAGACGCTGCCGGCACCACCGAGGAGTCGCACC CACAAGCCACGGAAGGCGGGAGGAGGCCCAAAAAGCAAGCGACGGACGCC GGCCGGGAGGGCGACGCAGACAGCAACATAGCCTTTGCCAAGACGCATCA ACACACGGAGACCCTCGAGGTCGCCAAGGACGTAGTGGGGCGAATTATTG GCAAGGGAGGAGAGACAATCCGTGACATCCAAACTCGTTCTGGGTGCCAG TGTGTGATCGACCAGAACGTCCCCGACAATGAGCCACGCATCCTCACAAT CGTGGGCAAGCCTGAAAATGTCGCCAATGCGATCAAGATGGTCGAGGCGG TGAAGGAAGGGGGGCCTTCGATGCTGGCAGACTTCCCGGAGGTGGCTGGG AACGTGAGGGCAACTGTAGATTGCCCGCGGGCGATAGTGGGGAGGTTGAT AGGAAAAGGCGGCGACATCATTCGCGAGATCCAATATAAATCCAAAGCCG TCATTCAGATCAATCAGAAGCTGCCACACGAGCAACCGTGCAAGGTCACC ATCACCGGCGCGCCCAAGGCAGTTCAGACAGGATAAATGGCGGACACTAA TGGCGCACATGCGCCCACCGAGGAGGAGCAGCTTCTGGAGGGCCATCAGG AGGAAGGGGAGGAGGAGTCAACTGCGACCACTGGCGGAGGGGAAGAATTG GAAGGGTCCGAGCCTGCCGCTCCTGCCAAACGCCAGCGGGAGGAAGACAT GGAGCAGCAGAATCTAGAAGAGGATAGGGGGGGAGATGGGAAGCGAAACG AAGAAGACGCTGCCGGCACCACCGAGGAGTCGCACCCACAAGCCACGGAA GGCGGGAGGAGGCCCAAAAAGCAAGCGACGGACGCCGGCCGGGAGGGCGA CGCAGACAGCAACATAGCCTTTGCCAAGACGCATCAACACACGGAGACCC TCGAGGTCGCCAAGGACGTAGTGGGGCGAATTATTGGCAAGGGAGGAGAG ACAATCCGTGACATCCAAACTCGTTCTGGGTGCCAGTGTGTGATCGACCA GAACGTCCCCGACAATGAGCCACGCATCCTCACAATCGTGGGCAAGCCTG AAAATGTCGCCAATGCGATCAAGATGGTCGAGGCGGTGAAGGAAGGGGGG CCTTCGATGCTGGCAGACTTCCCGGAGGTGGCTGGGAACGTGAGGGCAAC TGTAGATTGCCCGCGGGCGATAGTGGGGAGGTTGATAGGAAAAGGCGGCG ACATCATTCGCGAGATCCAATATAAATCCAAAGCCGTCATTCAGATCAAT CAGAAGCTGCCACACGAGCAACCGTGCAAGGTCACCATCACCGGCGCGCC CAAGGCAGTTCAGACAGGATAAATGGCGGACACTAATGGCGCACATGCGC CCACCGAGGAGGAGCAGCTTCTGGAGGGCCATCAGGAGGAAGGGGAGGAG GAGTCAACTGCGACCACTGGCGGAGGGGAAGAATTGGAAGGGTCCGAGCC TGCCGCTCCTGCCAAACGCCAGCGGGAGGAAGACATGGAGCAGCAGAATC TAGAAGAGGATAGGGGGGGAGATGGGAAGCGAAACGAAGAAGACGCTGCC GGCACCACCGAGGAGTCGCACCCACAAGCCACGGAAGGCGGGAGGAGGCC CAAAAAGCAAGCGACGGACGCCGGCCGGGAGGGCGACGCAGACAGCAACA TAGCCTTTGCCAAGACGCATCAACACACGGAGACCCTCGAGGTCGCCAAG GACGTAGTGGGGCGAATTATTGGCAAGGGAGGAGAGACAATCCGTGACAT CCAAACTCGTTCTGGGTGCCAGTGTGTGATCGACCAGAACGTCCCCGACA ATGAGCCACGCATCCTCACAATCGTGGGCAAGCCTGAAAATGTCGCCAAT GCGATCAAGATGGTCGAGGCGGTGAAGGAAGGGGGGCCTTCGATGCTGGC AGACTTCCCGGAGGTGGCTGGGAACGTGAGGGCAACTGTAGATTGCCCGC GGGCGATAGTGGGGAGGTTGATAGGAAAAGGCGGCGACATCATTCGCGAG ATCCAATATAAATCCAAAGCCGTCATTCAGATCAATCAGAAGCTGCCACA CGAGCAACCGTGCAAGGTCACCATCACCGGCGCGCCCAAGGCAGTTCAGA CAGGATAAATGGCGGACACTAATGGCGCACATGCGCCCACCGAGGAGGAG CAGCTTCTGGAGGGCCATCAGGAGGAAGGGGAGGAGGAGTCAACTGCGAC CACTGGCGGAGGGGAAGAATTGGAAGGGTCCGAGCCTGCCGCTCCTGCCA AACGCCAGCGGGAGGAAGACATGGAGCAGCAGAATCTAGAAGAGGATAGG GGGGGAGATGGGAAGCGAAACGAAGAAGACGCTGCCGGCACCACCGAGGA GTCGCACCCACAAGCCACGGAAGGCGGGAGGAGGCCCAAAAAGCAAGCGA CGGACGCCGGCCGGGAGGGCGACGCAGACAGCAACATAGCCTTTGCCAAG ACGCATCAACACACGGAGACCCTCGAGGTCGCCAAGGACGTAGTGGGGCG AATTATTGGCAAGGGAGGAGAGACAATCCGTGACATCCAAACTCGTTCTG GGTGCCAGTGTGTGATCGACCAGAACGTCCCCGACAATGAGCCACGCATC CTCACAATCGTGGGCAAGCCTGAAAATGTCGCCAATGCGATCAAGATGGT CGAGGCGGTGAAGGAAGGGGGGCCTTCGATGCTGGCAGACTTCCCGGAGG TGGCTGGGAACGTGAGGGCAACTGTAGATTGCCCGCGGGCGATAGTGGGG AGGTTGATAGGAAAAGGCGGCGACATCATTCGCGAGATCCAATATAAATC CAAAGCCGTCATTCAGATCAATCAGAAGCTGCCACACGAGCAACCGTGCA AGGTCACCATCACCGGCGCGCCCAAGGCAGTTCAGACAGGATAA back to top
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