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Properties
| Property Name | Value |
|---|
| TranscriptId | 536317 |
| Track | FilteredModels2 |
| ProteinId | 536231 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:265948..268127 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_715 ID=mRNA_715|Name=jgi.p|Nanoce1779_2|536231|organism=Nannochloropsis oceanica|type=mRNA|length=1598bp
ACAGCCTTTCAGCAACAGCTCCAGGACGATACGATGGCCCACTCGATGGA
TGCCGCAACGGAACGTCGCCTGCGGGAGCTGCCAGGCAACAGGGTCTGCG
CCGACTGCCCTGCCCCCAATCCCCAGTGGGCCAGCGTCTCTTATGGCTGC
TTCATCTGCTTGGACTGCTCTGGGCAACATCGTGCATTGGGCGTGCATCT
ATCGTTTGTCCGCTCTATTACCATGGATAGTTGGACCGACAAGCAAGTGA
AGCTAATGGAGAACGGGGGGAATGAAAAACTGGTTTCGTTCTTGCATCAG
AGGGGGGTGGAGAAGAGTCTGCCGATACACAAAAAGTACAATACTCCCGA
AGCAGAATTGTATAGGGAGAGGATGAAGGCTTTGGTTGAGGGGAGGGAGC
TACCGACGGAGCTCCCGAAGCGGGTACCTGCTCCTGTTCCTAGTGATGGA
GAGGGGGGGGGGCAAGTGGGTTCGGCCTTGGAACCTTTGCAGGGGGAGAC
AGAAGCGCAGTATGTGGCGCGGCAGAGACAGTTGAACGAAGAGGCGAGGC
AGAGGATGAAGGCCAAGTTTGGCCCGGCGGGGTTGAGTGGCGGTGGAGGA
GGAGGGAGAATGCAGGGGTTTGGTAGTGATCCCAATTATGACCCTTCCAA
GGGGGGGTTTGGTGGAGGCAAGGGACAGGATATTGGCGGTGAGATTATGG
GAGCTGTGGGAAAGCTAGGGTTGACGGTGCAGGCGCATTTGCAGGAGGGG
CAGTTGGGGCAAAAGCTGCAGATGGGTTGGAGCAACGTGTCAAGTCGGGT
CCAGGATCCGGAGCTGGCAGCGAAGGTGAAGGAAAAGGCGAGCACGGGCT
GGTCGGCACTGGCGACTGGGGCGGTGGCGCTTTGGAGTAAGACGGCTGAT
TTGACTGTGGACTTGGTGAAGGATATAACGAAGGAGGAGGAAGAACCCAT
GCGATTGTACAATAGGTCAGGAGGGGAGGGAGCGGGGAGAGGAGGTTTGG
TTATGGAGGGATTAGGAAGTAGAAGTGGAAGTAGTAGTAGCAGCAGCAGC
AGCAGTGGTGGTGGTGGATCGGGGATGGGGGGTCAGCAACAGCATCAGCA
GAGCTCGATGTTGGGCATGGGGACTTCTTCACCTTTTGTCGGCCGTGGAG
GCGGGGGGGGGTTGGGAGGGAGTGGAAACTGCAAAGCTACCCCGCCGAGG
CCTTTGCCGCCACCGGGGGTGGCGGCGACGACAGTAACGTCTACTACTAT
TTCTTCCTCCTCAGGTGGTGGTACTGGTGCAGCGGATGATGCGCTGGATT
TAGACGTGGATGCATTTATGACCAATGTCCGTGTTAGCAAGCCCACGTCG
TCGTCGTCGCAGCAGGCGCCCAAGGCGGCCGCACCGAAGGATGAGGACTT
CTTTTCCACGTTCGGTGTTTGAGCTTTGTTGGTGCACATGAGAAGATAGG
CGATGATTAGTGGAAGGGATATAAATGGAGGGGAAGGCATGAACAGAATA
AATGGAATCTTAGCCTGGAAATTTAGATGTGGAAGCTGTTGCGTGGAAAT
CAAAGAAAAAGCAAGTTTAATCGAATCAAGACAAGAGGGGGGAGGTCT back to topprotein sequence of jgi.p|Nanoce1779_2|536231 >mRNA_715-protein ID=mRNA_715-protein|Name=jgi.p|Nanoce1779_2|536231|organism=Nannochloropsis oceanica|type=polypeptide|length=463bp
MAHSMDAATERRLRELPGNRVCADCPAPNPQWASVSYGCFICLDCSGQHR
ALGVHLSFVRSITMDSWTDKQVKLMENGGNEKLVSFLHQRGVEKSLPIHK
KYNTPEAELYRERMKALVEGRELPTELPKRVPAPVPSDGEGGGQVGSALE
PLQGETEAQYVARQRQLNEEARQRMKAKFGPAGLSGGGGGGRMQGFGSDP
NYDPSKGGFGGGKGQDIGGEIMGAVGKLGLTVQAHLQEGQLGQKLQMGWS
NVSSRVQDPELAAKVKEKASTGWSALATGAVALWSKTADLTVDLVKDITK
EEEEPMRLYNRSGGEGAGRGGLVMEGLGSRSGSSSSSSSSSGGGGSGMGG
QQQHQQSSMLGMGTSSPFVGRGGGGGLGGSGNCKATPPRPLPPPGVAATT
VTSTTISSSSGGGTGAADDALDLDVDAFMTNVRVSKPTSSSSQQAPKAAA
PKDEDFFSTFGV* back to topmRNA from alignment at scaffold_2:265948..268127+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_715 ID=mRNA_715|Name=jgi.p|Nanoce1779_2|536231|organism=Nannochloropsis oceanica|type=mRNA|length=2180bp|location=Sequence derived from alignment at scaffold_2:265948..268127+ (Nannochloropsis oceanica)
ACAGCCTTTCAGCAACAGCTCCAGGACGATACGATGGCCCACTCGATGGA
TGCCGCAACGGAACGTCGCCTGCGGGAGCTGCCAGGCAACAGGGTACGTT
CGTTCATTAAACGATGATGATAAATGAATGTGTCGGGGTCCTGTACACTG
CAGATCATCGTGTGTGTCCCTCTGTGCGCCTGTGCTTGTAAGGATACATG
TGTGCGCGTGCGTGCTTTAGTGTACACCCAGATCAAAGACGCAAGAGCGC
TGGAGCCCTCCTGTAGTCTGCATCCGGCCGCCCGCTTCGTTCATGGTGAC
GATGACGATCTGGGGCTCCCGTTTCGCGGCAACACCAGACAACCTCAAGC
TGACGAAGCTCGAAAATGACCTTGCAGTGTACCATGCTTTGATGTCATCG
ATTGCCCTCTCTTTTTCCTTGACTCACATTCACCCTCCCCTCCCTCCCAA
AATTCCTCTTTCCGTCAGGTCTGCGCCGACTGCCCTGCCCCCAATCCCCA
GTGGGCCAGCGTCTCTTATGGCTGCTTCATCTGCTTGGACTGCTCTGGGC
AACATCGTGCATTGGGCGTGCATCTATCGTTTGTCCGCTCTATTACCATG
GATAGTTGGACCGACAAGCAAGTGAAGCTAATGGAGAACGGGGGGAATGA
AAAACTGGTTTCGTTCTTGCATCAGAGGGGGGTGGAGAAGAGTCTGCCGA
TACACAAAAAGTACAATACTCCCGAAGCAGAATTGTATAGGGAGAGGATG
AAGGCTTTGGTTGAGGGGAGGGAGCTACCGACGGAGCTCCCGAAGCGGGT
ACCTGCTCCTGTTCCTAGTGATGGAGAGGGGGGGGGGCAAGTGGGTTCGG
CCTTGGAACCTTTGCAGGGGGAGACAGAAGCGCAGTATGTGGCGCGGCAG
AGACAGTTGAACGAAGAGGCGAGGCAGAGGATGAAGGCCAAGTTTGGCCC
GGCGGGGTTGAGTGGCGGTGGAGGAGGAGGGAGAATGCAGGGGTTTGGTA
GTGATCCCAATTATGACCCTTCCAAGGGGGGGTTTGGTGGAGGCAAGGGA
CAGGATATTGGCGGTGAGATTATGGGAGCTGTGGGAAAGCTAGGGTTGAC
GGTGCAGGCGCATTTGCAGGAGGGGCAGTTGGGGCAAAAGCTGCAGATGG
GTTGGAGCAACGTGTCAAGTCGGGTCCAGGATCCGGAGCTGGCAGCGAAG
GTGAAGGAAAAGGCGAGCACGGGCTGGTCGGCACTGGCGACTGGGGCGGT
GGCGCTTTGGAGTAAGACGGCTGATTTGACTGTGGACTTGGTGAAGGATA
TAACGAAGGAGGAGGAAGAACCCATGCGATTGTACAATAGGTCAGGAGGG
GAGGGAGCGGGGAGAGGAGGTTTGGTTATGGAGGGATTAGGAAGTAGAAG
TGGAAGTAGTAGTAGCAGCAGCAGCAGCAGTGGTGGTGGTGGATCGGGGA
TGGGGGGTCAGCAACAGCATCAGCAGAGCTCGATGTTGGGCATGGGGACT
TCTTCACCTTTTGTCGGCCGTGGAGGCGGGGGGGGGTTGGGAGGGAGTGG
AAACGTCTATGGCAAGAGCAGTAGAGTGAGTGGGACACCTATGCGATCGG
TTTCTTCCCGGCCGCTGACAGGATTGGCTACCAAAGCAGATGGGTGGGAT
GATGATGAGGAGGATTTATTTGGAGGGGGGAACAGCAGTAGCAACAGCGG
GGGTTGGGAAGCTACTGCAGATCATCGTGCTCCACCTGTCGCTGCTTCTA
CCAATAGCGAGTGCAAAGCTACCCCGCCGAGGCCTTTGCCGCCACCGGGG
GTGGCGGCGACGACAGTAACGTCTACTACTATTTCTTCCTCCTCAGGTGG
TGGTACTGGTGCAGCGGATGATGCGCTGGATTTAGACGTGGATGCATTTA
TGACCAATGTCCGTGTTAGCAAGCCCACGTCGTCGTCGTCGCAGCAGGCG
CCCAAGGCGGCCGCACCGAAGGATGAGGACTTCTTTTCCACGTTCGGTGT
TTGAGCTTTGTTGGTGCACATGAGAAGATAGGCGATGATTAGTGGAAGGG
ATATAAATGGAGGGGAAGGCATGAACAGAATAAATGGAATCTTAGCCTGG
AAATTTAGATGTGGAAGCTGTTGCGTGGAAATCAAAGAAAAAGCAAGTTT
AATCGAATCAAGACAAGAGGGGGGAGGTCT back to topCoding sequence (CDS) from alignment at scaffold_2:265948..268127+ >mRNA_715 ID=mRNA_715|Name=jgi.p|Nanoce1779_2|536231|organism=Nannochloropsis oceanica|type=CDS|length=4167bp|location=Sequence derived from alignment at scaffold_2:265948..268127+ (Nannochloropsis oceanica)
ATGGCCCACTCGATGGATGCCGCAACGGAACGTCGCCTGCGGGAGCTGCC
AGGCAACAGGGTCTGCGCCGACTGCCCTGCCCCCAATCCCCAGTGGGCCA
GCGTCTCTTATGGCTGCTTCATCTGCTTGGACTGCTCTGGGCAACATCGT
GCATTGGGCGTGCATCTATCGTTTGTCCGCTCTATTACCATGGATAGTTG
GACCGACAAGCAAGTGAAGCTAATGGAGAACGGGGGGAATGAAAAACTGG
TTTCGTTCTTGCATCAGAGGGGGGTGGAGAAGAGTCTGCCGATACACAAA
AAGTACAATACTCCCGAAGCAGAATTGTATAGGGAGAGGATGAAGGCTTT
GGTTGAGGGGAGGGAGCTACCGACGGAGCTCCCGAAGCGGGTACCTGCTC
CTGTTCCTAGTGATGGAGAGGGGGGGGGGCAAGTGGGTTCGGCCTTGGAA
CCTTTGCAGGGGGAGACAGAAGCGCAGTATGTGGCGCGGCAGAGACAGTT
GAACGAAGAGGCGAGGCAGAGGATGAAGGCCAAGTTTGGCCCGGCGGGGT
TGAGTGGCGGTGGAGGAGGAGGGAGAATGCAGGGGTTTGGTAGTGATCCC
AATTATGACCCTTCCAAGGGGGGGTTTGGTGGAGGCAAGGGACAGGATAT
TGGCGGTGAGATTATGGGAGCTGTGGGAAAGCTAGGGTTGACGGTGCAGG
CGCATTTGCAGGAGGGGCAGTTGGGGCAAAAGCTGCAGATGGGTTGGAGC
AACGTGTCAAGTCGGGTCCAGGATCCGGAGCTGGCAGCGAAGGTGAAGGA
AAAGGCGAGCACGGGCTGGTCGGCACTGGCGACTGGGGCGGTGGCGCTTT
GGAGTAAGACGGCTGATTTGACTGTGGACTTGGTGAAGGATATAACGAAG
GAGGAGGAAGAACCCATGCGATTGTACAATAGGTCAGGAGGGGAGGGAGC
GGGGAGAGGAGGTTTGGTTATGGAGGGATTAGGAAGTAGAAGTGGAAGTA
GTAGTAGCAGCAGCAGCAGCAGTGGTGGTGGTGGATCGGGGATGGGGGGT
CAGCAACAGCATCAGCAGAGCTCGATGTTGGGCATGGGGACTTCTTCACC
TTTTGTCGGCCGTGGAGGCGGGGGGGGGTTGGGAGGGAGTGGAAACTGCA
AAGCTACCCCGCCGAGGCCTTTGCCGCCACCGGGGGTGGCGGCGACGACA
GTAACGTCTACTACTATTTCTTCCTCCTCAGGTGGTGGTACTGGTGCAGC
GGATGATGCGCTGGATTTAGACGTGGATGCATTTATGACCAATGTCCGTG
TTAGCAAGCCCACGTCGTCGTCGTCGCAGCAGGCGCCCAAGGCGGCCGCA
CCGAAGGATGAGGACTTCTTTTCCACGTTCGGTGTTTGAATGGCCCACTC
GATGGATGCCGCAACGGAACGTCGCCTGCGGGAGCTGCCAGGCAACAGGG
TCTGCGCCGACTGCCCTGCCCCCAATCCCCAGTGGGCCAGCGTCTCTTAT
GGCTGCTTCATCTGCTTGGACTGCTCTGGGCAACATCGTGCATTGGGCGT
GCATCTATCGTTTGTCCGCTCTATTACCATGGATAGTTGGACCGACAAGC
AAGTGAAGCTAATGGAGAACGGGGGGAATGAAAAACTGGTTTCGTTCTTG
CATCAGAGGGGGGTGGAGAAGAGTCTGCCGATACACAAAAAGTACAATAC
TCCCGAAGCAGAATTGTATAGGGAGAGGATGAAGGCTTTGGTTGAGGGGA
GGGAGCTACCGACGGAGCTCCCGAAGCGGGTACCTGCTCCTGTTCCTAGT
GATGGAGAGGGGGGGGGGCAAGTGGGTTCGGCCTTGGAACCTTTGCAGGG
GGAGACAGAAGCGCAGTATGTGGCGCGGCAGAGACAGTTGAACGAAGAGG
CGAGGCAGAGGATGAAGGCCAAGTTTGGCCCGGCGGGGTTGAGTGGCGGT
GGAGGAGGAGGGAGAATGCAGGGGTTTGGTAGTGATCCCAATTATGACCC
TTCCAAGGGGGGGTTTGGTGGAGGCAAGGGACAGGATATTGGCGGTGAGA
TTATGGGAGCTGTGGGAAAGCTAGGGTTGACGGTGCAGGCGCATTTGCAG
GAGGGGCAGTTGGGGCAAAAGCTGCAGATGGGTTGGAGCAACGTGTCAAG
TCGGGTCCAGGATCCGGAGCTGGCAGCGAAGGTGAAGGAAAAGGCGAGCA
CGGGCTGGTCGGCACTGGCGACTGGGGCGGTGGCGCTTTGGAGTAAGACG
GCTGATTTGACTGTGGACTTGGTGAAGGATATAACGAAGGAGGAGGAAGA
ACCCATGCGATTGTACAATAGGTCAGGAGGGGAGGGAGCGGGGAGAGGAG
GTTTGGTTATGGAGGGATTAGGAAGTAGAAGTGGAAGTAGTAGTAGCAGC
AGCAGCAGCAGTGGTGGTGGTGGATCGGGGATGGGGGGTCAGCAACAGCA
TCAGCAGAGCTCGATGTTGGGCATGGGGACTTCTTCACCTTTTGTCGGCC
GTGGAGGCGGGGGGGGGTTGGGAGGGAGTGGAAACTGCAAAGCTACCCCG
CCGAGGCCTTTGCCGCCACCGGGGGTGGCGGCGACGACAGTAACGTCTAC
TACTATTTCTTCCTCCTCAGGTGGTGGTACTGGTGCAGCGGATGATGCGC
TGGATTTAGACGTGGATGCATTTATGACCAATGTCCGTGTTAGCAAGCCC
ACGTCGTCGTCGTCGCAGCAGGCGCCCAAGGCGGCCGCACCGAAGGATGA
GGACTTCTTTTCCACGTTCGGTGTTTGAATGGCCCACTCGATGGATGCCG
CAACGGAACGTCGCCTGCGGGAGCTGCCAGGCAACAGGGTCTGCGCCGAC
TGCCCTGCCCCCAATCCCCAGTGGGCCAGCGTCTCTTATGGCTGCTTCAT
CTGCTTGGACTGCTCTGGGCAACATCGTGCATTGGGCGTGCATCTATCGT
TTGTCCGCTCTATTACCATGGATAGTTGGACCGACAAGCAAGTGAAGCTA
ATGGAGAACGGGGGGAATGAAAAACTGGTTTCGTTCTTGCATCAGAGGGG
GGTGGAGAAGAGTCTGCCGATACACAAAAAGTACAATACTCCCGAAGCAG
AATTGTATAGGGAGAGGATGAAGGCTTTGGTTGAGGGGAGGGAGCTACCG
ACGGAGCTCCCGAAGCGGGTACCTGCTCCTGTTCCTAGTGATGGAGAGGG
GGGGGGGCAAGTGGGTTCGGCCTTGGAACCTTTGCAGGGGGAGACAGAAG
CGCAGTATGTGGCGCGGCAGAGACAGTTGAACGAAGAGGCGAGGCAGAGG
ATGAAGGCCAAGTTTGGCCCGGCGGGGTTGAGTGGCGGTGGAGGAGGAGG
GAGAATGCAGGGGTTTGGTAGTGATCCCAATTATGACCCTTCCAAGGGGG
GGTTTGGTGGAGGCAAGGGACAGGATATTGGCGGTGAGATTATGGGAGCT
GTGGGAAAGCTAGGGTTGACGGTGCAGGCGCATTTGCAGGAGGGGCAGTT
GGGGCAAAAGCTGCAGATGGGTTGGAGCAACGTGTCAAGTCGGGTCCAGG
ATCCGGAGCTGGCAGCGAAGGTGAAGGAAAAGGCGAGCACGGGCTGGTCG
GCACTGGCGACTGGGGCGGTGGCGCTTTGGAGTAAGACGGCTGATTTGAC
TGTGGACTTGGTGAAGGATATAACGAAGGAGGAGGAAGAACCCATGCGAT
TGTACAATAGGTCAGGAGGGGAGGGAGCGGGGAGAGGAGGTTTGGTTATG
GAGGGATTAGGAAGTAGAAGTGGAAGTAGTAGTAGCAGCAGCAGCAGCAG
TGGTGGTGGTGGATCGGGGATGGGGGGTCAGCAACAGCATCAGCAGAGCT
CGATGTTGGGCATGGGGACTTCTTCACCTTTTGTCGGCCGTGGAGGCGGG
GGGGGGTTGGGAGGGAGTGGAAACTGCAAAGCTACCCCGCCGAGGCCTTT
GCCGCCACCGGGGGTGGCGGCGACGACAGTAACGTCTACTACTATTTCTT
CCTCCTCAGGTGGTGGTACTGGTGCAGCGGATGATGCGCTGGATTTAGAC
GTGGATGCATTTATGACCAATGTCCGTGTTAGCAAGCCCACGTCGTCGTC
GTCGCAGCAGGCGCCCAAGGCGGCCGCACCGAAGGATGAGGACTTCTTTT
CCACGTTCGGTGTTTGA back to top
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