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Properties
| Property Name | Value |
|---|
| TranscriptId | 595744 |
| Track | FilteredModels2 |
| ProteinId | 595658 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:323590..325240 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7114 ID=mRNA_7114|Name=jgi.p|Nanoce1779_2|595658|organism=Nannochloropsis oceanica|type=mRNA|length=1651bp
ACAGTTCGACAAGAGTATTGTTACACCTGTGCCTGGGATACTGCTGCCTC
GTGAGGCACAGTGTACCTGCAAGCTCGCTCCTCATCAGCTGCGGCCGCGC
TTACGTGGTGCTTGCTTGGATCATCCCGCCTTAATACCACACTTAAATGA
CGTACGATCTTGCGCGGCTGGCGCCGCCCGAGTCTTTGGCCAGGCCACGG
AAAGAAGTGGCCTCGCTAGTCGCCACGGGGCTGCGCTTTATCAATGGCGT
TTCCTCCTCCTACGATACGACCTTCCCACCCGCACTCGCAGGGGTAATGA
GCGAAACTGATTTCGTGGAAGCGGTGGGGAGGGTGAACAATGTATTAGTC
ATGTACTGGCCGTGCACGATGTGCTTTGTCTGTGGGTATGTCCTGAGCCC
TGTTACCTTAGGACTTTCTTTTGGATGCCCTAACATGTGTATCCAAGAGG
CGGAGCATTACGCGCGAAGGGAGCTGGAGTACTTGAATCACTCGGAAGCC
TTTCGAAACGCAGGCATGGTATGGAGCTTGCGCAAGAGTTTTTTGCAGTC
GTGGCTGGTGATCGAGTTGCCTTCGTGAGAAGAGCGACAGCGGCAGCAGC
GATAACAAAGAGGACGGGACTGCAATAGCGCCTTATAGGAGAGGAAGGAA
AGGAGAAAGGAGGCTGTTGATTTGACCCTAGATGTATGTTATGAGCTTTT
AAGTGGACAGAGCTTTTGTCCGCCTACCTTTCCCTCAACGAATGTCGAAA
AAGAGGAGGAGCATCGGTGCTCTGCATACTGGGAGCTGTTGTCCCAACGA
AACGCGCTAAAGTAGTCACGAGACACGCCGTACTCATTACCACATCTACC
AACACTCATGCGTGCGCACACACACATCCCAGACAGGCTATATGTTTATT
GCGGCAGCTATCAAGGATGACTGACGATATCTGCTGCTACCCTTCTGGTG
TCACTGTCACCACCACCTCCACTGCCCCAGCAGCTGGCGCTGGAGTAGCC
CAGCCAATGGGGATGGTGGAAGCGCCCCGACTGCTGATGAATGGGATCGA
GCTCTCCATCCATACCTGCACTAAGTCCATGGCGAGAGAGGTCAGGTATA
TATTCCCTCACCTTTCGTTGAACAGCAACACCGGTGCGAACCGCAGTGGA
GACAAGGCTCGAGTGCCGGCGGAGCTCCATGCTACGATTACAATGCCCAG
CACTGAGATCGGCGTCGCTGGCGGTCTGGAGAAGAGGCGACAGGACGAAG
AAAGAAGAGGACAGCTGCTCATCCTCCCCACCATTCAAAGGTCCCGGGTG
GACACGGTGCGCTTCGGCGTGGATGTGGAAGAAGAGAAAGACCGATGTCT
CGAGTACTTCGCAGATTTCGCCCGCCCGCTTTGCGAAAGCTTGCGCAGCC
AGGGCCACTGGGCGGATTTCATTGACCCTTGCTCGGGTCTGCCTATGATG
ACACCCCACTGCACTCGACCCTACAATGAGGTCGCAGGCTTTGAACACTT
ACTTAGATACACAACACAGAACGCCGGGTGCTGCAAAATTTTGCTTCATC
CCCGATGGGGCTCGAGTTGTTATCCGGCTACAATTTTTACGACCGCCCCT
CTTGAGAATGTCCAGGCGGCTATCAAAGTGGCGGAGAAGGGGGAGGCATG
G back to topprotein sequence of jgi.p|Nanoce1779_2|595658 >mRNA_7114-protein ID=mRNA_7114-protein|Name=jgi.p|Nanoce1779_2|595658|organism=Nannochloropsis oceanica|type=polypeptide|length=144bp
MTYDLARLAPPESLARPRKEVASLVATGLRFINGVSSSYDTTFPPALAGV
MSETDFVEAVGRVNNVLVMYWPCTMCFVCGYVLSPVTLGLSFGCPNMCIQ
EAEHYARRELEYLNHSEAFRNAGMVWSLRKSFLQSWLVIELPS* back to topmRNA from alignment at scaffold_16:323590..325240- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7114 ID=mRNA_7114|Name=jgi.p|Nanoce1779_2|595658|organism=Nannochloropsis oceanica|type=mRNA|length=1651bp|location=Sequence derived from alignment at scaffold_16:323590..325240- (Nannochloropsis oceanica)
ACAGTTCGACAAGAGTATTGTTACACCTGTGCCTGGGATACTGCTGCCTC
GTGAGGCACAGTGTACCTGCAAGCTCGCTCCTCATCAGCTGCGGCCGCGC
TTACGTGGTGCTTGCTTGGATCATCCCGCCTTAATACCACACTTAAATGA
CGTACGATCTTGCGCGGCTGGCGCCGCCCGAGTCTTTGGCCAGGCCACGG
AAAGAAGTGGCCTCGCTAGTCGCCACGGGGCTGCGCTTTATCAATGGCGT
TTCCTCCTCCTACGATACGACCTTCCCACCCGCACTCGCAGGGGTAATGA
GCGAAACTGATTTCGTGGAAGCGGTGGGGAGGGTGAACAATGTATTAGTC
ATGTACTGGCCGTGCACGATGTGCTTTGTCTGTGGGTATGTCCTGAGCCC
TGTTACCTTAGGACTTTCTTTTGGATGCCCTAACATGTGTATCCAAGAGG
CGGAGCATTACGCGCGAAGGGAGCTGGAGTACTTGAATCACTCGGAAGCC
TTTCGAAACGCAGGCATGGTATGGAGCTTGCGCAAGAGTTTTTTGCAGTC
GTGGCTGGTGATCGAGTTGCCTTCGTGAGAAGAGCGACAGCGGCAGCAGC
GATAACAAAGAGGACGGGACTGCAATAGCGCCTTATAGGAGAGGAAGGAA
AGGAGAAAGGAGGCTGTTGATTTGACCCTAGATGTATGTTATGAGCTTTT
AAGTGGACAGAGCTTTTGTCCGCCTACCTTTCCCTCAACGAATGTCGAAA
AAGAGGAGGAGCATCGGTGCTCTGCATACTGGGAGCTGTTGTCCCAACGA
AACGCGCTAAAGTAGTCACGAGACACGCCGTACTCATTACCACATCTACC
AACACTCATGCGTGCGCACACACACATCCCAGACAGGCTATATGTTTATT
GCGGCAGCTATCAAGGATGACTGACGATATCTGCTGCTACCCTTCTGGTG
TCACTGTCACCACCACCTCCACTGCCCCAGCAGCTGGCGCTGGAGTAGCC
CAGCCAATGGGGATGGTGGAAGCGCCCCGACTGCTGATGAATGGGATCGA
GCTCTCCATCCATACCTGCACTAAGTCCATGGCGAGAGAGGTCAGGTATA
TATTCCCTCACCTTTCGTTGAACAGCAACACCGGTGCGAACCGCAGTGGA
GACAAGGCTCGAGTGCCGGCGGAGCTCCATGCTACGATTACAATGCCCAG
CACTGAGATCGGCGTCGCTGGCGGTCTGGAGAAGAGGCGACAGGACGAAG
AAAGAAGAGGACAGCTGCTCATCCTCCCCACCATTCAAAGGTCCCGGGTG
GACACGGTGCGCTTCGGCGTGGATGTGGAAGAAGAGAAAGACCGATGTCT
CGAGTACTTCGCAGATTTCGCCCGCCCGCTTTGCGAAAGCTTGCGCAGCC
AGGGCCACTGGGCGGATTTCATTGACCCTTGCTCGGGTCTGCCTATGATG
ACACCCCACTGCACTCGACCCTACAATGAGGTCGCAGGCTTTGAACACTT
ACTTAGATACACAACACAGAACGCCGGGTGCTGCAAAATTTTGCTTCATC
CCCGATGGGGCTCGAGTTGTTATCCGGCTACAATTTTTACGACCGCCCCT
CTTGAGAATGTCCAGGCGGCTATCAAAGTGGCGGAGAAGGGGGAGGCATG
G back to topCoding sequence (CDS) from alignment at scaffold_16:323590..325240- >mRNA_7114 ID=mRNA_7114|Name=jgi.p|Nanoce1779_2|595658|organism=Nannochloropsis oceanica|type=CDS|length=432bp|location=Sequence derived from alignment at scaffold_16:323590..325240- (Nannochloropsis oceanica)
ATGACGTACGATCTTGCGCGGCTGGCGCCGCCCGAGTCTTTGGCCAGGCC
ACGGAAAGAAGTGGCCTCGCTAGTCGCCACGGGGCTGCGCTTTATCAATG
GCGTTTCCTCCTCCTACGATACGACCTTCCCACCCGCACTCGCAGGGGTA
ATGAGCGAAACTGATTTCGTGGAAGCGGTGGGGAGGGTGAACAATGTATT
AGTCATGTACTGGCCGTGCACGATGTGCTTTGTCTGTGGGTATGTCCTGA
GCCCTGTTACCTTAGGACTTTCTTTTGGATGCCCTAACATGTGTATCCAA
GAGGCGGAGCATTACGCGCGAAGGGAGCTGGAGTACTTGAATCACTCGGA
AGCCTTTCGAAACGCAGGCATGGTATGGAGCTTGCGCAAGAGTTTTTTGC
AGTCGTGGCTGGTGATCGAGTTGCCTTCGTGA back to top
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