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Properties
| Property Name | Value |
|---|
| TranscriptId | 595728 |
| Track | FilteredModels2 |
| ProteinId | 595642 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:313335..314525 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7108 ID=mRNA_7108|Name=jgi.p|Nanoce1779_2|595642|organism=Nannochloropsis oceanica|type=mRNA|length=1071bp
AGAAGAAGATCCTTTCATTATGTTCCGCTCGTCGACCGTGGCCTTGCTGC
GTCGCGCCGCCGCCTCTCCCGTGCCCCTACAGCAACATCAAATCGTGGTC
AGTCTTATGCCACGCAACGGTGCGAGTGCCATGGCTGCGGTGGTCTGCCG
GCAGCTGGCGGCGCCATCCTCGGTGGTGACGCGCAGCTTGGTCACACACG
CTGGCAGCGACGCCATGCCGAATGGGGATATGCCTGTAGGGACCGGGGCG
GGAGGACGATCGAGCACAAGCGCGGCGCTGGCTGATTTACTAGGCCGAGA
GTTGCAGGAAGAGAAGGAGCTGGTGGAGAATGAGGATCGAGCACCGGAGC
TGGAGGAGGTATCGGACAAGATCCACAAGCGCTTTCACATCAAGGAGTCC
CCCGGGAGCAGTATTATCAAGATGCATACAAAGCACGATTTGGAGAAAAT
TTTGGTGCAGTTTGATGTGCAGGACACGACAGAGGACGAGCTGGATCCTC
AGGAACTGGATGGGGAGAAGATCGAGGACTACACGGTGGGGGTCCGAGGG
GTGGTGAGCATTGCCAAGGCCCACCACAAGTTGATGTTCTCACTGGTGTT
TACCAACACAGTGTGGGTGGAGAAAGTGGCGTTCGATTCGCAGGGCCGGG
AATGGGATGATGAGACTTTGTATTGGTCAGATTTTTCAGAGTACCCTGAG
GATGTCCAAGATGCTTTCACGCGTTACTTGGCTGCGCGGCACATTGATGA
AGAACTGGCTGTGTTTGTGTCCTACTTTGCTTATGAAAAGGAGAAGGAGC
ATTATGTAGACTTCCTTGAGGAGGTGACGGGCTTTGTTGGTGCCAAGTGA
GAAAGAGTGAGAAAGGGCGGATGGTAAGGAGAGACGCTTCCGTGCTCTCG
CCTGGTCTCTGGGGTGGACGCGTAACCACGGGGTACGCTGAACCAAAGCT
GATGGGCACAAGACGATGAAACCAAGCACAAGACGATGAAACCACGCACA
CAACCGAAACAATCATGGGGGGGGAACAAATGCATTCTGGATACGCGGAG
GGGAAAAAATAGATCGGGTCA back to topprotein sequence of jgi.p|Nanoce1779_2|595642 >mRNA_7108-protein ID=mRNA_7108-protein|Name=jgi.p|Nanoce1779_2|595642|organism=Nannochloropsis oceanica|type=polypeptide|length=277bp
MFRSSTVALLRRAAASPVPLQQHQIVVSLMPRNGASAMAAVVCRQLAAPS
SVVTRSLVTHAGSDAMPNGDMPVGTGAGGRSSTSAALADLLGRELQEEKE
LVENEDRAPELEEVSDKIHKRFHIKESPGSSIIKMHTKHDLEKILVQFDV
QDTTEDELDPQELDGEKIEDYTVGVRGVVSIAKAHHKLMFSLVFTNTVWV
EKVAFDSQGREWDDETLYWSDFSEYPEDVQDAFTRYLAARHIDEELAVFV
SYFAYEKEKEHYVDFLEEVTGFVGAK* back to topmRNA from alignment at scaffold_16:313335..314525+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7108 ID=mRNA_7108|Name=jgi.p|Nanoce1779_2|595642|organism=Nannochloropsis oceanica|type=mRNA|length=1191bp|location=Sequence derived from alignment at scaffold_16:313335..314525+ (Nannochloropsis oceanica)
AGAAGAAGATCCTTTCATTATGTTCCGCTCGTCGACCGTGGCCTTGCTGC
GTCGCGCCGCCGCCTCTCCCGTGCCCCTACAGCAACATCAAATCGTGGTC
AGTCTTATGCCACGCAACGGTGCGAGTGCCATGGCTGCGGTGGTCTGCCG
GCAGCTGGCGGCGCCATCCTCGGTGGTGACGCGCAGCTTGGTCACACACG
CTGGCAGCGACGCCATGCCGAATGGGGATATGCCTGTAGGGACCGGGGCG
GGAGGACGATCGAGCACAAGCGCGGCGCTGGCTGATTTACTAGGCCGAGA
GTTGCAGGAAGAGAAGGAGCTGGTGGAGAATGAGGATCGAGCACCGGAGC
TGGAGGAGGTATCGGACAAGATCCACAAGCGCTTTCACATCAAGGAGTCC
CCCGGGAGCAGGTACGTGGGGACGTGGTTCGGTGTCCGGCGGGAGTGCAA
AGGGGGTTAGGAGGTTGGCTATGCCCTGTAATTCATTGATAATGGGTATC
TTCCAACCCTGTCTTTCATCTACCACATCAGTATTATCAAGATGCATACA
AAGCACGATTTGGAGAAAATTTTGGTGCAGTTTGATGTGCAGGACACGAC
AGAGGACGAGCTGGATCCTCAGGAACTGGATGGGGAGAAGATCGAGGACT
ACACGGTGGGGGTCCGAGGGGTGGTGAGCATTGCCAAGGCCCACCACAAG
TTGATGTTCTCACTGGTGTTTACCAACACAGTGTGGGTGGAGAAAGTGGC
GTTCGATTCGCAGGGCCGGGAATGGGATGATGAGACTTTGTATTGGTCAG
ATTTTTCAGAGTACCCTGAGGATGTCCAAGATGCTTTCACGCGTTACTTG
GCTGCGCGGCACATTGATGAAGAACTGGCTGTGTTTGTGTCCTACTTTGC
TTATGAAAAGGAGAAGGAGCATTATGTAGACTTCCTTGAGGAGGTGACGG
GCTTTGTTGGTGCCAAGTGAGAAAGAGTGAGAAAGGGCGGATGGTAAGGA
GAGACGCTTCCGTGCTCTCGCCTGGTCTCTGGGGTGGACGCGTAACCACG
GGGTACGCTGAACCAAAGCTGATGGGCACAAGACGATGAAACCAAGCACA
AGACGATGAAACCACGCACACAACCGAAACAATCATGGGGGGGGAACAAA
TGCATTCTGGATACGCGGAGGGGAAAAAATAGATCGGGTCA back to topCoding sequence (CDS) from alignment at scaffold_16:313335..314525+ >mRNA_7108 ID=mRNA_7108|Name=jgi.p|Nanoce1779_2|595642|organism=Nannochloropsis oceanica|type=CDS|length=1662bp|location=Sequence derived from alignment at scaffold_16:313335..314525+ (Nannochloropsis oceanica)
ATGTTCCGCTCGTCGACCGTGGCCTTGCTGCGTCGCGCCGCCGCCTCTCC
CGTGCCCCTACAGCAACATCAAATCGTGGTCAGTCTTATGCCACGCAACG
GTGCGAGTGCCATGGCTGCGGTGGTCTGCCGGCAGCTGGCGGCGCCATCC
TCGGTGGTGACGCGCAGCTTGGTCACACACGCTGGCAGCGACGCCATGCC
GAATGGGGATATGCCTGTAGGGACCGGGGCGGGAGGACGATCGAGCACAA
GCGCGGCGCTGGCTGATTTACTAGGCCGAGAGTTGCAGGAAGAGAAGGAG
CTGGTGGAGAATGAGGATCGAGCACCGGAGCTGGAGGAGGTATCGGACAA
GATCCACAAGCGCTTTCACATCAAGGAGTCCCCCGGGAGCAGTATTATCA
AGATGCATACAAAGCACGATTTGGAGAAAATTTTGGTGCAGTTTGATGTG
CAGGACACGACAGAGGACGAGCTGGATCCTCAGGAACTGGATGGGGAGAA
GATCGAGGACTACACGGTGGGGGTCCGAGGGGTGGTGAGCATTGCCAAGG
CCCACCACAAGTTGATGTTCTCACTGGTGTTTACCAACACAGTGTGGGTG
GAGAAAGTGGCGTTCGATTCGCAGGGCCGGGAATGGGATGATGAGACTTT
GTATTGGTCAGATTTTTCAGAGTACCCTGAGGATGTCCAAGATGCTTTCA
CGCGTTACTTGGCTGCGCGGCACATTGATGAAGAACTGGCTGTGTTTGTG
TCCTACTTTGCTTATGAAAAGGAGAAGGAGCATTATGTAGACTTCCTTGA
GGAGGTGACGGGCTTTGTTGGTGCCAAGTGAATGTTCCGCTCGTCGACCG
TGGCCTTGCTGCGTCGCGCCGCCGCCTCTCCCGTGCCCCTACAGCAACAT
CAAATCGTGGTCAGTCTTATGCCACGCAACGGTGCGAGTGCCATGGCTGC
GGTGGTCTGCCGGCAGCTGGCGGCGCCATCCTCGGTGGTGACGCGCAGCT
TGGTCACACACGCTGGCAGCGACGCCATGCCGAATGGGGATATGCCTGTA
GGGACCGGGGCGGGAGGACGATCGAGCACAAGCGCGGCGCTGGCTGATTT
ACTAGGCCGAGAGTTGCAGGAAGAGAAGGAGCTGGTGGAGAATGAGGATC
GAGCACCGGAGCTGGAGGAGGTATCGGACAAGATCCACAAGCGCTTTCAC
ATCAAGGAGTCCCCCGGGAGCAGTATTATCAAGATGCATACAAAGCACGA
TTTGGAGAAAATTTTGGTGCAGTTTGATGTGCAGGACACGACAGAGGACG
AGCTGGATCCTCAGGAACTGGATGGGGAGAAGATCGAGGACTACACGGTG
GGGGTCCGAGGGGTGGTGAGCATTGCCAAGGCCCACCACAAGTTGATGTT
CTCACTGGTGTTTACCAACACAGTGTGGGTGGAGAAAGTGGCGTTCGATT
CGCAGGGCCGGGAATGGGATGATGAGACTTTGTATTGGTCAGATTTTTCA
GAGTACCCTGAGGATGTCCAAGATGCTTTCACGCGTTACTTGGCTGCGCG
GCACATTGATGAAGAACTGGCTGTGTTTGTGTCCTACTTTGCTTATGAAA
AGGAGAAGGAGCATTATGTAGACTTCCTTGAGGAGGTGACGGGCTTTGTT
GGTGCCAAGTGA back to top
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