jgi.p|Nanoce1779_2|650426, mRNA_7107 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|650426
Unique Name	mRNA_7107
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4542
Alignment location	scaffold_16:308570..313111 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	650512
Track	FilteredModels2
ProteinId	650426

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_16	supercontig	scaffold_16:308570..313111 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|650426	gene_7107	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|650426	mRNA_7107-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_7107	CDS_7107	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_16:308570..313111+
coding sequence from alignment at scaffold_16:308570..313111+

mRNA sequence

>mRNA_7107 ID=mRNA_7107|Name=jgi.p|Nanoce1779_2|650426|organism=Nannochloropsis oceanica|type=mRNA|length=4542bp
ATGGATATGGAGAAGAGGGAGGGGATGACAACGGGGGATGGATATGGAGA
AGAGGGAGGGGACCATAATTGGAGGAAAAGCTTTTTTGTGGCCGCGGAAT
TTCTGTCCCATTTTTCGATATACGTAGATACGCGAACCCCTAGACTGACT
CTCCCTCTATCCATCCGCTACAGTCTGGCGAAAGACGACACTCTGGAGGA
GATGGTGTCCTTCCTCGTCAACCCCCCCCCTCCATCAGCTGACGAGAAGC
GCGTGCATAAGTACCCCTACATGACTTGCGAAGTCATCTGTTGCGAAAAC
GACCACGTGCTGGACGCCTTGATCTCCATGAAGGACGGCATGATGCTTCA
ACGTATTTTCTCCCTTTTAGACACAGAGGGAGAGCTCGATGACCGGTTAT
CAGGTTACTTTGAAAAAGTCGTGTTTGCATTGTTAAGGAGAAAATGCCAG
GAGTTGATGGCTTTTTTAAATGGGGGGGGCTTACCTCTTTTCCGGAAATT
TGTACGGCATTTGAACAATTATTCGATTATGCAGGTCGTGGAGCGACTGT
TCTTGTTCCAGCCTGTGTGGGATGGGCAGGCTGGGGGAGGGGGGGGAGGA
CAGCAGCAGGTGGGGCTGGACATAGGGGAAAGTGGGGGGGAGGATGCGTC
AGGGAGCGGGCATGCGGTGGACTTGAGTTTGTTGACGTGTCAGTGGAGCA
GCATGCCGGAGGTGGTGGACATTTTAGTGGATCAATTAGTAGAGAGGGGG
GAGACCCAAGCCGCGGCAGGGGAGGAGGAAGGAAGGGAAAGAGGCCAGGG
AGGGCAAGGAACAGCGGCGACTCATACGCATGTGGCGAGTTTGTTGCTGG
AAGTGATTGATCATGCAAGCCCGGATTCAATTTTTATCAGGTGTTTGACT
GATAAGGTTGCACGGCTGGTCGAGATCGCCATTCCTGCTCTCGACCTCAC
CCAGCCGTCTGAGGTGGTGGCCGCACAGGCCTTGGCGGTGGTGAAGGAGG
AGAGGTCGAGTATGCTCTCTGCCTTGACGATTGTGGAGGCGCTTTTGTCT
CGACCGCAAGCGATCAAATTGCAGTGGGACATGGGGCAGCAACAAATAGG
GGTGCTTGCCTCCCCCCTTTCTCCCCCTCTGCCCGTGGAAGAATCAATGC
CCGATGCTGAAGGCGAGGGAGAAGATACAGCATCACCAGCAGCACCAGCA
CCAGCAGCGGACCAGCAGGAGTCGACCCCTCTCTCCTCCTCTTCCTCCTC
CTCTCCCTGCACCTCCTTTTCCGAGCAACCACTTGAAGAAGGAGACACGC
CAACACCAGACACCAGCCCCCTTCCCGCGTCCTCTGACGGCGCATCCCCT
ACCATCCCAACAGCACCAGCGGTTGAGGTGGAAGTCAACGACGGCCCAGA
CGGGGCATCAAAAGCCTTCTCCTTCGGAAAAAGCAGCGGCGTCGCCAATC
TTTCGGAGGAAGTGGTCGAGAAGCTTATCGCCTCCCTCCCTCACATCCGC
ATCTACCTCCAGACCCACGAATCAGATACCCGGACCGTGGCCACTCAAGT
GAAAGACCCGGCGCCCAAGCTCGGCTTGACCCGCCTAAAGCTCGTGCGTC
ACGTGGAGGCATTGGTCAAGCTCTGCTCGGCGCGTGTCGATAGGCCCTTG
GAGGACGGAGGGATCTTGAAGGTGTGCTTGGATATGCTGTTTAAGTATGA
GTGGACCAGTGTACTGCATCAGAGTATCACTAGAATCGTGACCTGGATCA
TGGACGCGGGACCGTCCAGGCTGGGACTGCAGACGTATTTAGTGAAGGAG
GGGGCGATATTGGAGCGGATCCTGGATGCGAGTGATTACAACGATAGGAT
GGAGGCACATGATGTCATGGTGGAGGAGGGAAGTGAGGAGGGAGCGATGC
GGAAAGGGATGGTGGCGAAGGCGAAGGGGAAGGATATGATGGAGGATAAA
GGGAGCGAGGAGGCGAGGGCGGCTGCTGTGGCTGATGCTGCTGCTGAGCA
CGCCACCGGTCCTATGTCTGTCGAAATGGAGTGCGGACAGCCGGTGCCCA
TGAACGTTGAGGGAGGGGAGGAAGGGAGGGAAGGAGAAGAAGAGACCTTT
TCTGCGATCCATCCTGTCGCACCCGCCCAAGGCGCAGCAACAGCGGCAAT
AGGCGTAAGCCCGCTCGCTCCTGCCTGCTCCTCCCTCTCCATGACCGCCG
TCAACGTTATCAGCAGCACCAACGACTCTTTCTCCAATGCGGCTGCGACT
GCGGGCCACAGCAGCAACAGAGGTCTCCGTCGGTGCCGACGTGGCTACAT
GGGCCATGTGTTTATTATGTCTCAAGCCATCATGGAGGCCGCCCGGTACC
ACCCACCCCTGCTCGAGGAAGGGGGGGATGAAGGGGCTGTGGACGTGGAT
GTAGATGACCCCATTGTTGCAGGTCTCTTGCTGTCAGCCGCCGAGGGGCG
TGGTCCCTCCCTCTCTCTCTCCTCTTCTTCCTCGGAGCAGCAACAAAAGT
TGCAGCAGCTTCCTGCCGGCGACTATCACCCCTCGATGTCAACTACGCAA
GACAGTCGTCCCTCCTTTGCTCAAGTAATGGAAACGGTCATAGACCCTGC
CTTGAAGGAACGATGGTTGAATTTTACTCAAGGAAAGTTAGCACAAGTAA
CGGCCACCCAAAGCCACCCTCTCGGTGGGTACCCCATCCCTTCCCGCGCG
GATGAGAATAAGCTGACCACGACATTCGGTGGTGATAACAGTGGAGAGGG
AGGGGAGGGGGAGGGAGGGCCGGATTTCGATGTCATTTCGGACCATTTGG
CGCAGAGGTTGTCGGGGGTGGAGGTGGGAAGTGAGGGAGGGGTAGGGGAG
GAGGGTGGGGGGGAGCAGCAGATGCAGGAGGGGGGAGCAGGGTCGAGTTG
GCGAAGAGGGGACAGGCATCAGATGCAGGAGGAGAAAGAAGACGATGACG
AAGAAGGACGGTGGATAGCCATGGAGCAGCGTCAAGCGGAGGTGCGGATG
GGGCGGGATCCCTTCGAGAACGACGAGAGCATTTTCCCCAACGACAAGGA
GAGTTTTGAAATGAGCAGCAGGAGCAGGGAGAGTAACGGTCATGAGGAAG
GAGAAGAGTCGGCGCAGACGAGGAAGGGCCATGTTCCGGGCCTGGTTGCA
GGTGGGTGGGCAGCCAAGGCCTTTGCGGAGGGAGCGCCGTCGGGGGGGAC
GTTTGGAGAGGGATGGGCGGATTTTTCGAGCGTTTCTTTCCCCCCCTTGG
ACACGTTGACCATGCCGCTTGGGAGTGCTGCCGCCAGTAATTACATCATT
GGGAGTGGGAGGGGCAGGACGCCGGTAAGTAGTGACTTCGATGATGTGCC
GGGTTTCATGGGCATGCAAGCGGGAGGGGGGGCAGGAGGGGGAGGGGATA
AGGTAAACAAAGGGAACGACGGGGATGAGGAGGAAGATAGCAACGAAGAG
GAGGATGATTTCTTTTCGTCTTCCACGACGGTGCACCTTAAGCGTGGCAC
CGGAACGGGTCCGAGAGCAGTGGCGGCGGCGGCGGCGGCGGCGGCGGCTG
CGGTGGACAACAGCAACGATCTCAACGACGAGGAGAATAATAGCGGCGAC
GGTGAGGATGGGGATAAAGTGAAGAAGTTTTCCTATTCAGTGGCCGCCGC
CACGACCAACAGTGTACAGCAGGAGGGAGGCGGAAGTGGAGGAGGGGCAG
GATCAACGTCTGCTGAGATAGGCAACAGCTGAAGGGAGAAGGACGACGAG
TTCATTACTGAGGAAACAGGCTAATTGTTTCATGCGATGCAAGACGGCGA
CCACTTCACTAATACATAAGCACGACAAAAAGCAAGTGAAAGTAGATAGA
CAGAGCGGAAAAAGTGTACGCATTTTGGACGACGGAGAGGAATAAAGAGA
GTAATTGAGCCCATCAGACCAACCCATTTTGTTTTCCTCTCCTTGTGAGA
GAGTCAGTGAGTGAGAGTAGTGTGTGATGCCGGAAGGCTAGTGTGAGTAG
ATAGAAATTTCCATTGATGTCTCCTTTAAATTCCAGGGATTAGAAGAAGA
ACATGAAGAAGGAAGAAGGAGGTAGAAGAAGTGAAGGAGGAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAATGGGAAAAGAAGACAGAAGCAAGTGAAG
AAGAGGAAGAAGGTGGAGAAGAATCAGAAGGAGAAGGAGGAAGAGAAGAA
GAGGAAGATTGAGGAGAAGAAGAAAAAGAAGAAGAAGAAGAAGATGATGA
AGAAGATGAAGAAATACAAAGGAGAATAAAAAGCTCCCCGAAGAGGCCAT
GAGCAGACACGTCGATCAATTTATATTTGAAAGAAGGATAGGGAAAAGGA
TCCACTCACCCTGTTTATCAACAGGAAGCGGAGATAATATATAAAATGCC
CCATCGTATACACAATCGGCTATCCAAAACTTACATTTTCTAAGCAGAGG
TCGAAGCTGTAGGCAGCGCAATGCCTGCGCTGACAGCCGACGCGGAAAAT
TATATCAGGCACTTGGTTGATTTGATAGATTTAAGTTCATCT

protein sequence of jgi.p|Nanoce1779_2|650426

>mRNA_7107-protein ID=mRNA_7107-protein|Name=jgi.p|Nanoce1779_2|650426|organism=Nannochloropsis oceanica|type=polypeptide|length=1244bp
MDMEKREGMTTGDGYGEEGGDHNWRKSFFVAAEFLSHFSIYVDTRTPRLT
LPLSIRYSLAKDDTLEEMVSFLVNPPPPSADEKRVHKYPYMTCEVICCEN
DHVLDALISMKDGMMLQRIFSLLDTEGELDDRLSGYFEKVVFALLRRKCQ
ELMAFLNGGGLPLFRKFVRHLNNYSIMQVVERLFLFQPVWDGQAGGGGGG
QQQVGLDIGESGGEDASGSGHAVDLSLLTCQWSSMPEVVDILVDQLVERG
ETQAAAGEEEGRERGQGGQGTAATHTHVASLLLEVIDHASPDSIFIRCLT
DKVARLVEIAIPALDLTQPSEVVAAQALAVVKEERSSMLSALTIVEALLS
RPQAIKLQWDMGQQQIGVLASPLSPPLPVEESMPDAEGEGEDTASPAAPA
PAADQQESTPLSSSSSSSPCTSFSEQPLEEGDTPTPDTSPLPASSDGASP
TIPTAPAVEVEVNDGPDGASKAFSFGKSSGVANLSEEVVEKLIASLPHIR
IYLQTHESDTRTVATQVKDPAPKLGLTRLKLVRHVEALVKLCSARVDRPL
EDGGILKVCLDMLFKYEWTSVLHQSITRIVTWIMDAGPSRLGLQTYLVKE
GAILERILDASDYNDRMEAHDVMVEEGSEEGAMRKGMVAKAKGKDMMEDK
GSEEARAAAVADAAAEHATGPMSVEMECGQPVPMNVEGGEEGREGEEETF
SAIHPVAPAQGAATAAIGVSPLAPACSSLSMTAVNVISSTNDSFSNAAAT
AGHSSNRGLRRCRRGYMGHVFIMSQAIMEAARYHPPLLEEGGDEGAVDVD
VDDPIVAGLLLSAAEGRGPSLSLSSSSSEQQQKLQQLPAGDYHPSMSTTQ
DSRPSFAQVMETVIDPALKERWLNFTQGKLAQVTATQSHPLGGYPIPSRA
DENKLTTTFGGDNSGEGGEGEGGPDFDVISDHLAQRLSGVEVGSEGGVGE
EGGGEQQMQEGGAGSSWRRGDRHQMQEEKEDDDEEGRWIAMEQRQAEVRM
GRDPFENDESIFPNDKESFEMSSRSRESNGHEEGEESAQTRKGHVPGLVA
GGWAAKAFAEGAPSGGTFGEGWADFSSVSFPPLDTLTMPLGSAAASNYII
GSGRGRTPVSSDFDDVPGFMGMQAGGGAGGGGDKVNKGNDGDEEEDSNEE
EDDFFSSSTTVHLKRGTGTGPRAVAAAAAAAAAAVDNSNDLNDEENNSGD
GEDGDKVKKFSYSVAAATTNSVQQEGGGSGGGAGSTSAEIGNS*

mRNA from alignment at scaffold_16:308570..313111+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_7107 ID=mRNA_7107|Name=jgi.p|Nanoce1779_2|650426|organism=Nannochloropsis oceanica|type=mRNA|length=4542bp|location=Sequence derived from alignment at scaffold_16:308570..313111+ (Nannochloropsis oceanica)
ATGGATATGGAGAAGAGGGAGGGGATGACAACGGGGGATGGATATGGAGA
AGAGGGAGGGGACCATAATTGGAGGAAAAGCTTTTTTGTGGCCGCGGAAT
TTCTGTCCCATTTTTCGATATACGTAGATACGCGAACCCCTAGACTGACT
CTCCCTCTATCCATCCGCTACAGTCTGGCGAAAGACGACACTCTGGAGGA
GATGGTGTCCTTCCTCGTCAACCCCCCCCCTCCATCAGCTGACGAGAAGC
GCGTGCATAAGTACCCCTACATGACTTGCGAAGTCATCTGTTGCGAAAAC
GACCACGTGCTGGACGCCTTGATCTCCATGAAGGACGGCATGATGCTTCA
ACGTATTTTCTCCCTTTTAGACACAGAGGGAGAGCTCGATGACCGGTTAT
CAGGTTACTTTGAAAAAGTCGTGTTTGCATTGTTAAGGAGAAAATGCCAG
GAGTTGATGGCTTTTTTAAATGGGGGGGGCTTACCTCTTTTCCGGAAATT
TGTACGGCATTTGAACAATTATTCGATTATGCAGGTCGTGGAGCGACTGT
TCTTGTTCCAGCCTGTGTGGGATGGGCAGGCTGGGGGAGGGGGGGGAGGA
CAGCAGCAGGTGGGGCTGGACATAGGGGAAAGTGGGGGGGAGGATGCGTC
AGGGAGCGGGCATGCGGTGGACTTGAGTTTGTTGACGTGTCAGTGGAGCA
GCATGCCGGAGGTGGTGGACATTTTAGTGGATCAATTAGTAGAGAGGGGG
GAGACCCAAGCCGCGGCAGGGGAGGAGGAAGGAAGGGAAAGAGGCCAGGG
AGGGCAAGGAACAGCGGCGACTCATACGCATGTGGCGAGTTTGTTGCTGG
AAGTGATTGATCATGCAAGCCCGGATTCAATTTTTATCAGGTGTTTGACT
GATAAGGTTGCACGGCTGGTCGAGATCGCCATTCCTGCTCTCGACCTCAC
CCAGCCGTCTGAGGTGGTGGCCGCACAGGCCTTGGCGGTGGTGAAGGAGG
AGAGGTCGAGTATGCTCTCTGCCTTGACGATTGTGGAGGCGCTTTTGTCT
CGACCGCAAGCGATCAAATTGCAGTGGGACATGGGGCAGCAACAAATAGG
GGTGCTTGCCTCCCCCCTTTCTCCCCCTCTGCCCGTGGAAGAATCAATGC
CCGATGCTGAAGGCGAGGGAGAAGATACAGCATCACCAGCAGCACCAGCA
CCAGCAGCGGACCAGCAGGAGTCGACCCCTCTCTCCTCCTCTTCCTCCTC
CTCTCCCTGCACCTCCTTTTCCGAGCAACCACTTGAAGAAGGAGACACGC
CAACACCAGACACCAGCCCCCTTCCCGCGTCCTCTGACGGCGCATCCCCT
ACCATCCCAACAGCACCAGCGGTTGAGGTGGAAGTCAACGACGGCCCAGA
CGGGGCATCAAAAGCCTTCTCCTTCGGAAAAAGCAGCGGCGTCGCCAATC
TTTCGGAGGAAGTGGTCGAGAAGCTTATCGCCTCCCTCCCTCACATCCGC
ATCTACCTCCAGACCCACGAATCAGATACCCGGACCGTGGCCACTCAAGT
GAAAGACCCGGCGCCCAAGCTCGGCTTGACCCGCCTAAAGCTCGTGCGTC
ACGTGGAGGCATTGGTCAAGCTCTGCTCGGCGCGTGTCGATAGGCCCTTG
GAGGACGGAGGGATCTTGAAGGTGTGCTTGGATATGCTGTTTAAGTATGA
GTGGACCAGTGTACTGCATCAGAGTATCACTAGAATCGTGACCTGGATCA
TGGACGCGGGACCGTCCAGGCTGGGACTGCAGACGTATTTAGTGAAGGAG
GGGGCGATATTGGAGCGGATCCTGGATGCGAGTGATTACAACGATAGGAT
GGAGGCACATGATGTCATGGTGGAGGAGGGAAGTGAGGAGGGAGCGATGC
GGAAAGGGATGGTGGCGAAGGCGAAGGGGAAGGATATGATGGAGGATAAA
GGGAGCGAGGAGGCGAGGGCGGCTGCTGTGGCTGATGCTGCTGCTGAGCA
CGCCACCGGTCCTATGTCTGTCGAAATGGAGTGCGGACAGCCGGTGCCCA
TGAACGTTGAGGGAGGGGAGGAAGGGAGGGAAGGAGAAGAAGAGACCTTT
TCTGCGATCCATCCTGTCGCACCCGCCCAAGGCGCAGCAACAGCGGCAAT
AGGCGTAAGCCCGCTCGCTCCTGCCTGCTCCTCCCTCTCCATGACCGCCG
TCAACGTTATCAGCAGCACCAACGACTCTTTCTCCAATGCGGCTGCGACT
GCGGGCCACAGCAGCAACAGAGGTCTCCGTCGGTGCCGACGTGGCTACAT
GGGCCATGTGTTTATTATGTCTCAAGCCATCATGGAGGCCGCCCGGTACC
ACCCACCCCTGCTCGAGGAAGGGGGGGATGAAGGGGCTGTGGACGTGGAT
GTAGATGACCCCATTGTTGCAGGTCTCTTGCTGTCAGCCGCCGAGGGGCG
TGGTCCCTCCCTCTCTCTCTCCTCTTCTTCCTCGGAGCAGCAACAAAAGT
TGCAGCAGCTTCCTGCCGGCGACTATCACCCCTCGATGTCAACTACGCAA
GACAGTCGTCCCTCCTTTGCTCAAGTAATGGAAACGGTCATAGACCCTGC
CTTGAAGGAACGATGGTTGAATTTTACTCAAGGAAAGTTAGCACAAGTAA
CGGCCACCCAAAGCCACCCTCTCGGTGGGTACCCCATCCCTTCCCGCGCG
GATGAGAATAAGCTGACCACGACATTCGGTGGTGATAACAGTGGAGAGGG
AGGGGAGGGGGAGGGAGGGCCGGATTTCGATGTCATTTCGGACCATTTGG
CGCAGAGGTTGTCGGGGGTGGAGGTGGGAAGTGAGGGAGGGGTAGGGGAG
GAGGGTGGGGGGGAGCAGCAGATGCAGGAGGGGGGAGCAGGGTCGAGTTG
GCGAAGAGGGGACAGGCATCAGATGCAGGAGGAGAAAGAAGACGATGACG
AAGAAGGACGGTGGATAGCCATGGAGCAGCGTCAAGCGGAGGTGCGGATG
GGGCGGGATCCCTTCGAGAACGACGAGAGCATTTTCCCCAACGACAAGGA
GAGTTTTGAAATGAGCAGCAGGAGCAGGGAGAGTAACGGTCATGAGGAAG
GAGAAGAGTCGGCGCAGACGAGGAAGGGCCATGTTCCGGGCCTGGTTGCA
GGTGGGTGGGCAGCCAAGGCCTTTGCGGAGGGAGCGCCGTCGGGGGGGAC
GTTTGGAGAGGGATGGGCGGATTTTTCGAGCGTTTCTTTCCCCCCCTTGG
ACACGTTGACCATGCCGCTTGGGAGTGCTGCCGCCAGTAATTACATCATT
GGGAGTGGGAGGGGCAGGACGCCGGTAAGTAGTGACTTCGATGATGTGCC
GGGTTTCATGGGCATGCAAGCGGGAGGGGGGGCAGGAGGGGGAGGGGATA
AGGTAAACAAAGGGAACGACGGGGATGAGGAGGAAGATAGCAACGAAGAG
GAGGATGATTTCTTTTCGTCTTCCACGACGGTGCACCTTAAGCGTGGCAC
CGGAACGGGTCCGAGAGCAGTGGCGGCGGCGGCGGCGGCGGCGGCGGCTG
CGGTGGACAACAGCAACGATCTCAACGACGAGGAGAATAATAGCGGCGAC
GGTGAGGATGGGGATAAAGTGAAGAAGTTTTCCTATTCAGTGGCCGCCGC
CACGACCAACAGTGTACAGCAGGAGGGAGGCGGAAGTGGAGGAGGGGCAG
GATCAACGTCTGCTGAGATAGGCAACAGCTGAAGGGAGAAGGACGACGAG
TTCATTACTGAGGAAACAGGCTAATTGTTTCATGCGATGCAAGACGGCGA
CCACTTCACTAATACATAAGCACGACAAAAAGCAAGTGAAAGTAGATAGA
CAGAGCGGAAAAAGTGTACGCATTTTGGACGACGGAGAGGAATAAAGAGA
GTAATTGAGCCCATCAGACCAACCCATTTTGTTTTCCTCTCCTTGTGAGA
GAGTCAGTGAGTGAGAGTAGTGTGTGATGCCGGAAGGCTAGTGTGAGTAG
ATAGAAATTTCCATTGATGTCTCCTTTAAATTCCAGGGATTAGAAGAAGA
ACATGAAGAAGGAAGAAGGAGGTAGAAGAAGTGAAGGAGGAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAATGGGAAAAGAAGACAGAAGCAAGTGAAG
AAGAGGAAGAAGGTGGAGAAGAATCAGAAGGAGAAGGAGGAAGAGAAGAA
GAGGAAGATTGAGGAGAAGAAGAAAAAGAAGAAGAAGAAGAAGATGATGA
AGAAGATGAAGAAATACAAAGGAGAATAAAAAGCTCCCCGAAGAGGCCAT
GAGCAGACACGTCGATCAATTTATATTTGAAAGAAGGATAGGGAAAAGGA
TCCACTCACCCTGTTTATCAACAGGAAGCGGAGATAATATATAAAATGCC
CCATCGTATACACAATCGGCTATCCAAAACTTACATTTTCTAAGCAGAGG
TCGAAGCTGTAGGCAGCGCAATGCCTGCGCTGACAGCCGACGCGGAAAAT
TATATCAGGCACTTGGTTGATTTGATAGATTTAAGTTCATCT

Coding sequence (CDS) from alignment at scaffold_16:308570..313111+

>mRNA_7107 ID=mRNA_7107|Name=jgi.p|Nanoce1779_2|650426|organism=Nannochloropsis oceanica|type=CDS|length=3732bp|location=Sequence derived from alignment at scaffold_16:308570..313111+ (Nannochloropsis oceanica)
ATGGATATGGAGAAGAGGGAGGGGATGACAACGGGGGATGGATATGGAGA
AGAGGGAGGGGACCATAATTGGAGGAAAAGCTTTTTTGTGGCCGCGGAAT
TTCTGTCCCATTTTTCGATATACGTAGATACGCGAACCCCTAGACTGACT
CTCCCTCTATCCATCCGCTACAGTCTGGCGAAAGACGACACTCTGGAGGA
GATGGTGTCCTTCCTCGTCAACCCCCCCCCTCCATCAGCTGACGAGAAGC
GCGTGCATAAGTACCCCTACATGACTTGCGAAGTCATCTGTTGCGAAAAC
GACCACGTGCTGGACGCCTTGATCTCCATGAAGGACGGCATGATGCTTCA
ACGTATTTTCTCCCTTTTAGACACAGAGGGAGAGCTCGATGACCGGTTAT
CAGGTTACTTTGAAAAAGTCGTGTTTGCATTGTTAAGGAGAAAATGCCAG
GAGTTGATGGCTTTTTTAAATGGGGGGGGCTTACCTCTTTTCCGGAAATT
TGTACGGCATTTGAACAATTATTCGATTATGCAGGTCGTGGAGCGACTGT
TCTTGTTCCAGCCTGTGTGGGATGGGCAGGCTGGGGGAGGGGGGGGAGGA
CAGCAGCAGGTGGGGCTGGACATAGGGGAAAGTGGGGGGGAGGATGCGTC
AGGGAGCGGGCATGCGGTGGACTTGAGTTTGTTGACGTGTCAGTGGAGCA
GCATGCCGGAGGTGGTGGACATTTTAGTGGATCAATTAGTAGAGAGGGGG
GAGACCCAAGCCGCGGCAGGGGAGGAGGAAGGAAGGGAAAGAGGCCAGGG
AGGGCAAGGAACAGCGGCGACTCATACGCATGTGGCGAGTTTGTTGCTGG
AAGTGATTGATCATGCAAGCCCGGATTCAATTTTTATCAGGTGTTTGACT
GATAAGGTTGCACGGCTGGTCGAGATCGCCATTCCTGCTCTCGACCTCAC
CCAGCCGTCTGAGGTGGTGGCCGCACAGGCCTTGGCGGTGGTGAAGGAGG
AGAGGTCGAGTATGCTCTCTGCCTTGACGATTGTGGAGGCGCTTTTGTCT
CGACCGCAAGCGATCAAATTGCAGTGGGACATGGGGCAGCAACAAATAGG
GGTGCTTGCCTCCCCCCTTTCTCCCCCTCTGCCCGTGGAAGAATCAATGC
CCGATGCTGAAGGCGAGGGAGAAGATACAGCATCACCAGCAGCACCAGCA
CCAGCAGCGGACCAGCAGGAGTCGACCCCTCTCTCCTCCTCTTCCTCCTC
CTCTCCCTGCACCTCCTTTTCCGAGCAACCACTTGAAGAAGGAGACACGC
CAACACCAGACACCAGCCCCCTTCCCGCGTCCTCTGACGGCGCATCCCCT
ACCATCCCAACAGCACCAGCGGTTGAGGTGGAAGTCAACGACGGCCCAGA
CGGGGCATCAAAAGCCTTCTCCTTCGGAAAAAGCAGCGGCGTCGCCAATC
TTTCGGAGGAAGTGGTCGAGAAGCTTATCGCCTCCCTCCCTCACATCCGC
ATCTACCTCCAGACCCACGAATCAGATACCCGGACCGTGGCCACTCAAGT
GAAAGACCCGGCGCCCAAGCTCGGCTTGACCCGCCTAAAGCTCGTGCGTC
ACGTGGAGGCATTGGTCAAGCTCTGCTCGGCGCGTGTCGATAGGCCCTTG
GAGGACGGAGGGATCTTGAAGGTGTGCTTGGATATGCTGTTTAAGTATGA
GTGGACCAGTGTACTGCATCAGAGTATCACTAGAATCGTGACCTGGATCA
TGGACGCGGGACCGTCCAGGCTGGGACTGCAGACGTATTTAGTGAAGGAG
GGGGCGATATTGGAGCGGATCCTGGATGCGAGTGATTACAACGATAGGAT
GGAGGCACATGATGTCATGGTGGAGGAGGGAAGTGAGGAGGGAGCGATGC
GGAAAGGGATGGTGGCGAAGGCGAAGGGGAAGGATATGATGGAGGATAAA
GGGAGCGAGGAGGCGAGGGCGGCTGCTGTGGCTGATGCTGCTGCTGAGCA
CGCCACCGGTCCTATGTCTGTCGAAATGGAGTGCGGACAGCCGGTGCCCA
TGAACGTTGAGGGAGGGGAGGAAGGGAGGGAAGGAGAAGAAGAGACCTTT
TCTGCGATCCATCCTGTCGCACCCGCCCAAGGCGCAGCAACAGCGGCAAT
AGGCGTAAGCCCGCTCGCTCCTGCCTGCTCCTCCCTCTCCATGACCGCCG
TCAACGTTATCAGCAGCACCAACGACTCTTTCTCCAATGCGGCTGCGACT
GCGGGCCACAGCAGCAACAGAGGTCTCCGTCGGTGCCGACGTGGCTACAT
GGGCCATGTGTTTATTATGTCTCAAGCCATCATGGAGGCCGCCCGGTACC
ACCCACCCCTGCTCGAGGAAGGGGGGGATGAAGGGGCTGTGGACGTGGAT
GTAGATGACCCCATTGTTGCAGGTCTCTTGCTGTCAGCCGCCGAGGGGCG
TGGTCCCTCCCTCTCTCTCTCCTCTTCTTCCTCGGAGCAGCAACAAAAGT
TGCAGCAGCTTCCTGCCGGCGACTATCACCCCTCGATGTCAACTACGCAA
GACAGTCGTCCCTCCTTTGCTCAAGTAATGGAAACGGTCATAGACCCTGC
CTTGAAGGAACGATGGTTGAATTTTACTCAAGGAAAGTTAGCACAAGTAA
CGGCCACCCAAAGCCACCCTCTCGGTGGGTACCCCATCCCTTCCCGCGCG
GATGAGAATAAGCTGACCACGACATTCGGTGGTGATAACAGTGGAGAGGG
AGGGGAGGGGGAGGGAGGGCCGGATTTCGATGTCATTTCGGACCATTTGG
CGCAGAGGTTGTCGGGGGTGGAGGTGGGAAGTGAGGGAGGGGTAGGGGAG
GAGGGTGGGGGGGAGCAGCAGATGCAGGAGGGGGGAGCAGGGTCGAGTTG
GCGAAGAGGGGACAGGCATCAGATGCAGGAGGAGAAAGAAGACGATGACG
AAGAAGGACGGTGGATAGCCATGGAGCAGCGTCAAGCGGAGGTGCGGATG
GGGCGGGATCCCTTCGAGAACGACGAGAGCATTTTCCCCAACGACAAGGA
GAGTTTTGAAATGAGCAGCAGGAGCAGGGAGAGTAACGGTCATGAGGAAG
GAGAAGAGTCGGCGCAGACGAGGAAGGGCCATGTTCCGGGCCTGGTTGCA
GGTGGGTGGGCAGCCAAGGCCTTTGCGGAGGGAGCGCCGTCGGGGGGGAC
GTTTGGAGAGGGATGGGCGGATTTTTCGAGCGTTTCTTTCCCCCCCTTGG
ACACGTTGACCATGCCGCTTGGGAGTGCTGCCGCCAGTAATTACATCATT
GGGAGTGGGAGGGGCAGGACGCCGGTAAGTAGTGACTTCGATGATGTGCC
GGGTTTCATGGGCATGCAAGCGGGAGGGGGGGCAGGAGGGGGAGGGGATA
AGGTAAACAAAGGGAACGACGGGGATGAGGAGGAAGATAGCAACGAAGAG
GAGGATGATTTCTTTTCGTCTTCCACGACGGTGCACCTTAAGCGTGGCAC
CGGAACGGGTCCGAGAGCAGTGGCGGCGGCGGCGGCGGCGGCGGCGGCTG
CGGTGGACAACAGCAACGATCTCAACGACGAGGAGAATAATAGCGGCGAC
GGTGAGGATGGGGATAAAGTGAAGAAGTTTTCCTATTCAGTGGCCGCCGC
CACGACCAACAGTGTACAGCAGGAGGGAGGCGGAAGTGGAGGAGGGGCAG
GATCAACGTCTGCTGAGATAGGCAACAGCTGA

Synonyms

Publications