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Properties
| Property Name | Value |
|---|
| TranscriptId | 595711 |
| Track | FilteredModels2 |
| ProteinId | 595625 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:298479..300027 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7103 ID=mRNA_7103|Name=jgi.p|Nanoce1779_2|595625|organism=Nannochloropsis oceanica|type=mRNA|length=1549bp
GCATGCTCGGTCACAGGAGCGGTCTTGCTCGCTTAGAAAATCCAGCGAGC
GTTGTCTCTATTTCCTCGCACTGGGCGCTCGTTTAAGTTTGCCACGACCA
CTGCCTTGCGCTTCAGGTGCTGAGCAATGATTTACTTAGTTTTGGATGCC
ACGGCTTTCGCTTGGCGTGCTGACGTTACGGGCAGTGCCTCAGCAGGACC
CCCCCAACCCATTCTTCTCATTCAACTCTTTCTCACTCACATTGGTTCTA
TACCCGTATTCTCTCCACCACGTCGCAAATTAAGCACCGCAAGACACAGA
GAATGGGTGCAGGCAAAAAGGCTCGGTCAAAGGGTCGCAAGGCCAGGAAG
GTGACTGTGGCAGCGCACAGAGAAGCGACGATAAAAGCCTTGGCACTCTC
TCCGGAGGACATGCGGTCACTCGGCGTTTTTGAGGCTGACATAGGCCCCT
GTGGTGCTGGTGCTACCGTTCCTGCTCCTCCTGATCTATCTACGCTCACC
ATCGGATCTGAACGGCTCCGCGAGAACGATCAGTCAGGGCGAGCAGCTGT
CAACAGCCAAATCGCGCTTGTGTACCACACGCGTGCCTCGTTGCCAACCT
CATGGAAAGAGCTGCTCTTCGCCCTCTTCGAGGCCAACATGGAGGAGCAA
TACAAAAGTAATTGGGGTTATCGTGAAGGAGAGAAACGGAGCGAGATATT
TGCGTCTGAGTCGAGGTACCTAGTGGCGGTTCTGCCCTCGTCAAAAATGA
CCCAAAAAGAAGACGGAGAGCAGCAACAGCAGCAGGCGCAGACGCAGGAT
AGCGGCACACCAGTCGGATTCGTGCACCTCCGTTTCGTCCTCGACGACGA
CGAGGATCCTCCTGTGGCCGTGTTGTATGTTTACGAGATCCAACTTGCGC
CGAGCGTGCAACGGCAAGGGTTGGGGGCGCGGATGATGGCAGTAGTGGAA
GCCATGGCTGTGAAGCTGAGAATGAAGAAATTGAAGTTGACGGTGTTTAA
GAGCAATAAAGCGGCGTTAGATTTTTATGAGAAGAAACTGGGCTACGTGG
TGGATGGCACATCGCCGAGCCGGAATAGGTTGCTGACGGAGTGTTACGAG
ATTTTGTCCAAGGAGGTGATACAGGCGGGGAAGGGGGGGAAGCCCTAGGC
TTTGGAAAAAGTGTTGATACTGATAAGGAGCATCAAAGGATTGGGGTAAC
GCCTAGATTTTCTACATGTTATTCCTTCATTCCTTTTTTAAAATTAATTT
TCAACAATTTTCGCTAGGACTGGATAACAACGTGATCTTCGTCCCCATCG
TCTTCGTCCTCCTCATCTGCTATCAAAAAGACATCACCAGCTAGGCTGGC
TGGTAGATTGTGCCTTTTCTTTTGAAAAAGCGAGAGATTCCACAATGACA
AAAACGATGCCGGCCATGGTGGAGGAGACAGAATGGCAGTGGTGCCAGAT
GCGCAGGAAGCTTCTTCACCTCAGCAGCAGCAGTAGCAGCAGCAGTATGG
AATGGTGGTGGTGCCGGCGAGGAGGAGGGATGCCCCCCCCCCCCCACCC back to topprotein sequence of jgi.p|Nanoce1779_2|595625 >mRNA_7103-protein ID=mRNA_7103-protein|Name=jgi.p|Nanoce1779_2|595625|organism=Nannochloropsis oceanica|type=polypeptide|length=282bp
MGAGKKARSKGRKARKVTVAAHREATIKALALSPEDMRSLGVFEADIGPC
GAGATVPAPPDLSTLTIGSERLRENDQSGRAAVNSQIALVYHTRASLPTS
WKELLFALFEANMEEQYKSNWGYREGEKRSEIFASESRYLVAVLPSSKMT
QKEDGEQQQQQAQTQDSGTPVGFVHLRFVLDDDEDPPVAVLYVYEIQLAP
SVQRQGLGARMMAVVEAMAVKLRMKKLKLTVFKSNKAALDFYEKKLGYVV
DGTSPSRNRLLTECYEILSKEVIQAGKGGKP* back to topmRNA from alignment at scaffold_16:298479..300027+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7103 ID=mRNA_7103|Name=jgi.p|Nanoce1779_2|595625|organism=Nannochloropsis oceanica|type=mRNA|length=1549bp|location=Sequence derived from alignment at scaffold_16:298479..300027+ (Nannochloropsis oceanica)
GCATGCTCGGTCACAGGAGCGGTCTTGCTCGCTTAGAAAATCCAGCGAGC
GTTGTCTCTATTTCCTCGCACTGGGCGCTCGTTTAAGTTTGCCACGACCA
CTGCCTTGCGCTTCAGGTGCTGAGCAATGATTTACTTAGTTTTGGATGCC
ACGGCTTTCGCTTGGCGTGCTGACGTTACGGGCAGTGCCTCAGCAGGACC
CCCCCAACCCATTCTTCTCATTCAACTCTTTCTCACTCACATTGGTTCTA
TACCCGTATTCTCTCCACCACGTCGCAAATTAAGCACCGCAAGACACAGA
GAATGGGTGCAGGCAAAAAGGCTCGGTCAAAGGGTCGCAAGGCCAGGAAG
GTGACTGTGGCAGCGCACAGAGAAGCGACGATAAAAGCCTTGGCACTCTC
TCCGGAGGACATGCGGTCACTCGGCGTTTTTGAGGCTGACATAGGCCCCT
GTGGTGCTGGTGCTACCGTTCCTGCTCCTCCTGATCTATCTACGCTCACC
ATCGGATCTGAACGGCTCCGCGAGAACGATCAGTCAGGGCGAGCAGCTGT
CAACAGCCAAATCGCGCTTGTGTACCACACGCGTGCCTCGTTGCCAACCT
CATGGAAAGAGCTGCTCTTCGCCCTCTTCGAGGCCAACATGGAGGAGCAA
TACAAAAGTAATTGGGGTTATCGTGAAGGAGAGAAACGGAGCGAGATATT
TGCGTCTGAGTCGAGGTACCTAGTGGCGGTTCTGCCCTCGTCAAAAATGA
CCCAAAAAGAAGACGGAGAGCAGCAACAGCAGCAGGCGCAGACGCAGGAT
AGCGGCACACCAGTCGGATTCGTGCACCTCCGTTTCGTCCTCGACGACGA
CGAGGATCCTCCTGTGGCCGTGTTGTATGTTTACGAGATCCAACTTGCGC
CGAGCGTGCAACGGCAAGGGTTGGGGGCGCGGATGATGGCAGTAGTGGAA
GCCATGGCTGTGAAGCTGAGAATGAAGAAATTGAAGTTGACGGTGTTTAA
GAGCAATAAAGCGGCGTTAGATTTTTATGAGAAGAAACTGGGCTACGTGG
TGGATGGCACATCGCCGAGCCGGAATAGGTTGCTGACGGAGTGTTACGAG
ATTTTGTCCAAGGAGGTGATACAGGCGGGGAAGGGGGGGAAGCCCTAGGC
TTTGGAAAAAGTGTTGATACTGATAAGGAGCATCAAAGGATTGGGGTAAC
GCCTAGATTTTCTACATGTTATTCCTTCATTCCTTTTTTAAAATTAATTT
TCAACAATTTTCGCTAGGACTGGATAACAACGTGATCTTCGTCCCCATCG
TCTTCGTCCTCCTCATCTGCTATCAAAAAGACATCACCAGCTAGGCTGGC
TGGTAGATTGTGCCTTTTCTTTTGAAAAAGCGAGAGATTCCACAATGACA
AAAACGATGCCGGCCATGGTGGAGGAGACAGAATGGCAGTGGTGCCAGAT
GCGCAGGAAGCTTCTTCACCTCAGCAGCAGCAGTAGCAGCAGCAGTATGG
AATGGTGGTGGTGCCGGCGAGGAGGAGGGATGCCCCCCCCCCCCCACCC back to topCoding sequence (CDS) from alignment at scaffold_16:298479..300027+ >mRNA_7103 ID=mRNA_7103|Name=jgi.p|Nanoce1779_2|595625|organism=Nannochloropsis oceanica|type=CDS|length=846bp|location=Sequence derived from alignment at scaffold_16:298479..300027+ (Nannochloropsis oceanica)
ATGGGTGCAGGCAAAAAGGCTCGGTCAAAGGGTCGCAAGGCCAGGAAGGT
GACTGTGGCAGCGCACAGAGAAGCGACGATAAAAGCCTTGGCACTCTCTC
CGGAGGACATGCGGTCACTCGGCGTTTTTGAGGCTGACATAGGCCCCTGT
GGTGCTGGTGCTACCGTTCCTGCTCCTCCTGATCTATCTACGCTCACCAT
CGGATCTGAACGGCTCCGCGAGAACGATCAGTCAGGGCGAGCAGCTGTCA
ACAGCCAAATCGCGCTTGTGTACCACACGCGTGCCTCGTTGCCAACCTCA
TGGAAAGAGCTGCTCTTCGCCCTCTTCGAGGCCAACATGGAGGAGCAATA
CAAAAGTAATTGGGGTTATCGTGAAGGAGAGAAACGGAGCGAGATATTTG
CGTCTGAGTCGAGGTACCTAGTGGCGGTTCTGCCCTCGTCAAAAATGACC
CAAAAAGAAGACGGAGAGCAGCAACAGCAGCAGGCGCAGACGCAGGATAG
CGGCACACCAGTCGGATTCGTGCACCTCCGTTTCGTCCTCGACGACGACG
AGGATCCTCCTGTGGCCGTGTTGTATGTTTACGAGATCCAACTTGCGCCG
AGCGTGCAACGGCAAGGGTTGGGGGCGCGGATGATGGCAGTAGTGGAAGC
CATGGCTGTGAAGCTGAGAATGAAGAAATTGAAGTTGACGGTGTTTAAGA
GCAATAAAGCGGCGTTAGATTTTTATGAGAAGAAACTGGGCTACGTGGTG
GATGGCACATCGCCGAGCCGGAATAGGTTGCTGACGGAGTGTTACGAGAT
TTTGTCCAAGGAGGTGATACAGGCGGGGAAGGGGGGGAAGCCCTAG back to top
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