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Properties
| Property Name | Value |
|---|
| TranscriptId | 595682 |
| Track | FilteredModels2 |
| ProteinId | 595596 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:283149..285541 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7095 ID=mRNA_7095|Name=jgi.p|Nanoce1779_2|595596|organism=Nannochloropsis oceanica|type=mRNA|length=2041bp
ACAGGCACATGAGTTCGGAGGAGGAGTTTGATTCTGGTCCTGCAGACCGC
TTGAAGGGCTTCGAGTCGTTTTTCTTGAAGCAAACATGTTTGTAGGTACC
TGTGCCGCGACATTTTCAATCCGCCTGGCACCCTCCCACTCATGCGTACG
CACCCATGGATGAACAGAAACCGACCGTCTGGCAAGAATTCACCCCCCTG
GCCGCCCAGGTCAAGGCCGTTAACCTCGGCCAAGGATTCCCCGATTGGCC
CACCCCATCTTTCTGCAAGTCCGCGGCGATCAACGCGATCGAGAGCAATC
TTAACCAATATTGTCGCTCCGGGGGGTTACCCGCCTTGACGTCTGCTCTC
GCCCACCACTACTCCCCTCTGTTCGAACGAGAATTAAATGCCGAGAAGGA
AGTGACCGTGTCTGTGGGGGTATCGGAAGGTCTGTTTGCGGCCATTCACT
CATTAGTAAACCCGGGGGATGAGGTCATTTTGATCGAGCCCGCATTTGAC
ATCTATGCCGCGCAGATCCAAATGGCTGGCGGTACCTGCGTCCATGTCCC
TCTCCGTCCTCCCTCCTCCTCCATCTCCTTCTCTCCTTCCTCCTCCACCT
CCTGGCACCTAGACTGGGGTGAACTTTCTGCGGCATTTTCCCCTCGCACA
CGCCTTCTCCTTCTCAACACCCCCCAGAATCCGACGGGAAAAGTATTTAC
CCGCGAAGAGCTCGAAAAGATTTCCTCCCTCGTCCAGGCTCACCCTCGCG
CCCTCGTCCTCTCCGACGAGGTTTACGAAAACATCACATTCGACGAACAC
CAGCACACCCGCCTGGCCACCTTGCCGGGAATGTGGGAGCGAACATTGAC
GCTGTCTTCGGCGGGGAAAACGTTCAGCGTGACGGGGTGGAAGATAGGCT
GGTTGATCGGCCCAGAGAGATTGATTGGCGGCGTCATGTGCTGTAACCAG
TGGGTACAATTTTCGGTGGCGACTCCTCTACAGGCAGCGGTAGCGGAGAT
GTTGACAAAAGCGAAGGAGCCGTATGAAGGTTTTCCCTCTTACTATGCGT
GGCTGAAAGAGGAATACTCGCGCAAGCGCTCTCTTCTAATCGATGCCCTG
ACAACCGCGGGTCTCAAGCCCTTCGTCCCCGAAGGCGGATTTTTCATAGT
CGCAGACACAAGCAACATAACCGTTCCCTCCTCCTATTTGTGGGAAACGA
CCCCTGCCTCCCCCTCGCCCATGTCACGGGATTGGGCATTTTGTCGTTTT
ATGACGCTAGAAGCAGGCGTGGCTGCTATTCCGCCTTCGGCCTTCTATAA
AGAAGGGCATAAAAAGCTTGCAGAAAATCATGCGAGGTTTGCCTTTTGTA
AGGCGGACGAGAGCATTCTCGAGGCCAAGACCCGATTTGGCAGGTGGAAG
AAGGAGGGAGAGAGGGAGAGAGAGGATGATGGTGGAGATGGAAAGGCCTA
GATACAAAAGGAACAGGGAGGGGAAGGGAGAAGTGTGAGCAGGAAAATAC
GGGGACTTTGAGGAGAGTGTGTGGCGGGAAATAGAAAAGAGGTGGGAGAA
ATCATCACCAATTTTGCCTCCGTTTCTTGTCAATGTCGCTGTTGTTGCTC
GGCAAGGCCGAGGCTGAGATGAACAGGACGGACACTGGTGGGTTGAAGGA
AACGAAGTAGTATAGAGATCACAAGAATAGGGATAGATGAAACGGGGAGA
ACATGAAGCAGCATCAGCAGCAACAGCAGCCGTAGCAGCCGAAGAAGCAA
ACCTTACACACTGAAAGAGCCCTTTCACTTACACCACAATGCCTCTTCTG
TCAGCTAAACTTACTCCTCTTCATCTTCTTTCTTTTTTCTCTCCTCGTCA
TTTCTCATCACAGGCACACACACGATTTCCAAATTTGCCCCACCGGAACA
ACCGACTCCTCCTCCCTCCCGCCCTCTGCTCCTCATCAAGTCAATCGATG
TTCCTCGCACCTGACGTTTTTCGACACGGCCTATCAGCTTGGACCTCCTC
ACCACACGCTCAAGCAGCATGGAAGGAGGGAGGGGGGGAGG back to topprotein sequence of jgi.p|Nanoce1779_2|595596 >mRNA_7095-protein ID=mRNA_7095-protein|Name=jgi.p|Nanoce1779_2|595596|organism=Nannochloropsis oceanica|type=polypeptide|length=432bp
MDEQKPTVWQEFTPLAAQVKAVNLGQGFPDWPTPSFCKSAAINAIESNLN
QYCRSGGLPALTSALAHHYSPLFERELNAEKEVTVSVGVSEGLFAAIHSL
VNPGDEVILIEPAFDIYAAQIQMAGGTCVHVPLRPPSSSISFSPSSSTSW
HLDWGELSAAFSPRTRLLLLNTPQNPTGKVFTREELEKISSLVQAHPRAL
VLSDEVYENITFDEHQHTRLATLPGMWERTLTLSSAGKTFSVTGWKIGWL
IGPERLIGGVMCCNQWVQFSVATPLQAAVAEMLTKAKEPYEGFPSYYAWL
KEEYSRKRSLLIDALTTAGLKPFVPEGGFFIVADTSNITVPSSYLWETTP
ASPSPMSRDWAFCRFMTLEAGVAAIPPSAFYKEGHKKLAENHARFAFCKA
DESILEAKTRFGRWKKEGEREREDDGGDGKA* back to topmRNA from alignment at scaffold_16:283149..285541- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7095 ID=mRNA_7095|Name=jgi.p|Nanoce1779_2|595596|organism=Nannochloropsis oceanica|type=mRNA|length=2393bp|location=Sequence derived from alignment at scaffold_16:283149..285541- (Nannochloropsis oceanica)
ACAGGCACATGAGTTCGGAGGAGGAGTTTGATTCTGGTCCTGCAGACCGC
TTGAAGGGCTTCGAGGTACATGCACAATGGTGGGAGGGCGGAGAGGGTGT
CGTTGGATGCATTCTTCATGCTCTTTCTGTTGTCTCTTAATTGTCTCCTA
CTCTCCCTCGTGCAAGTCGTTTTTCTTGAAGCAAACATGTTTGTAGGTAC
CTGTGCCGCGACATTTTCAATCCGCCTGGCACCCTCCCACTCATGCGTAC
GCACCCATGGATGAACAGAAACCGACCGTCTGGCAAGAATTCACCCCCCT
GGCCGCCCAGGTCAAGGCCGTTAACCTCGGCCAAGGATTCCCCGATTGGC
CCACCCCATCTTTCTGCAAGTCCGCGGCGATCAACGCGATCGAGAGCAAT
CTTAACCAATATTGTCGCTCCGGGGGGTTACCCGCCTTGACGTCTGCTCT
CGCCCACCACTACTCCCCTCTGTTCGAACGAGAATTAAATGCCGAGAAGG
AAGTGACCGTGTCTGTGGGGGTATCGGAAGGTCTGTTTGCGGCCATTCAC
TCATTAGTAAACCCGGGGGATGAGGTCATTTTGATCGAGCCCGCATTTGA
CATCTATGCCGCGCAGGTAGGGAATGAGGGAAGGAGGGGAGGGAGGAAGG
GAGAAGGGTTGGCGTTTCAGGTCGCAGCCCATGGTTAAGCTAAACACTTA
CAAGATATCGCACCATTTTCTCTTCCCCCCTCCTTTCCTCCCATTCTGTT
TCCTTTTTTTAGATCCAAATGGCTGGCGGTACCTGCGTCCATGTCCCTCT
CCGTCCTCCCTCCTCCTCCATCTCCTTCTCTCCTTCCTCCTCCACCTCCT
GGCACCTAGACTGGGGTGAACTTTCTGCGGCATTTTCCCCTCGCACACGC
CTTCTCCTTCTCAACACCCCCCAGAATCCGACGGGAAAAGTATTTACCCG
CGAAGAGCTCGAAAAGATTTCCTCCCTCGTCCAGGCTCACCCTCGCGCCC
TCGTCCTCTCCGACGAGGTTTACGAAAACATCACATTCGACGAACACCAG
CACACCCGCCTGGCCACCTTGCCGGGAATGTGGGAGCGAACATTGACGCT
GTCTTCGGCGGGGAAAACGTTCAGCGTGACGGGGTGGAAGATAGGCTGGT
TGATCGGCCCAGAGAGATTGATTGGCGGCGTCATGTGCTGTAACCAGTGG
GTACAATTTTCGGTGGCGACTCCTCTACAGGCAGCGGTAGCGGAGATGTT
GACAAAAGCGAAGGAGCCGTATGAAGGTTTTCCCTCTTACTATGCGTGGC
TGAAAGAGGAATACTCGCGCAAGCGGTAGGAAGGGAGGGAAAGCGGGAGG
GAGGAAGGGACTGATCTCACATCGCTTCGCTCATTCCAGCTTCTCTTTTC
CTTCCTTCCCCTCCCTCCCTTCCCCCGCAGCTCTCTTCTAATCGATGCCC
TGACAACCGCGGGTCTCAAGCCCTTCGTCCCCGAAGGCGGATTTTTCATA
GTCGCAGACACAAGCAACATAACCGTTCCCTCCTCCTATTTGTGGGAAAC
GACCCCTGCCTCCCCCTCGCCCATGTCACGGGATTGGGCATTTTGTCGTT
TTATGACGCTAGAAGCAGGCGTGGCTGCTATTCCGCCTTCGGCCTTCTAT
AAAGAAGGGCATAAAAAGCTTGCAGAAAATCATGCGAGGTTTGCCTTTTG
TAAGGCGGACGAGAGCATTCTCGAGGCCAAGACCCGATTTGGCAGGTGGA
AGAAGGAGGGAGAGAGGGAGAGAGAGGATGATGGTGGAGATGGAAAGGCC
TAGATACAAAAGGAACAGGGAGGGGAAGGGAGAAGTGTGAGCAGGAAAAT
ACGGGGACTTTGAGGAGAGTGTGTGGCGGGAAATAGAAAAGAGGTGGGAG
AAATCATCACCAATTTTGCCTCCGTTTCTTGTCAATGTCGCTGTTGTTGC
TCGGCAAGGCCGAGGCTGAGATGAACAGGACGGACACTGGTGGGTTGAAG
GAAACGAAGTAGTATAGAGATCACAAGAATAGGGATAGATGAAACGGGGA
GAACATGAAGCAGCATCAGCAGCAACAGCAGCCGTAGCAGCCGAAGAAGC
AAACCTTACACACTGAAAGAGCCCTTTCACTTACACCACAATGCCTCTTC
TGTCAGCTAAACTTACTCCTCTTCATCTTCTTTCTTTTTTCTCTCCTCGT
CATTTCTCATCACAGGCACACACACGATTTCCAAATTTGCCCCACCGGAA
CAACCGACTCCTCCTCCCTCCCGCCCTCTGCTCCTCATCAAGTCAATCGA
TGTTCCTCGCACCTGACGTTTTTCGACACGGCCTATCAGCTTGGACCTCC
TCACCACACGCTCAAGCAGCATGGAAGGAGGGAGGGGGGGAGG back to topCoding sequence (CDS) from alignment at scaffold_16:283149..285541- >mRNA_7095 ID=mRNA_7095|Name=jgi.p|Nanoce1779_2|595596|organism=Nannochloropsis oceanica|type=CDS|length=3888bp|location=Sequence derived from alignment at scaffold_16:283149..285541- (Nannochloropsis oceanica)
CTCTCTTCTAATCGATGCCCTGACAACCGCGGGTCTCAAGCCCTTCGTCC
CCGAAGGCGGATTTTTCATAGTCGCAGACACAAGCAACATAACCGTTCCC
TCCTCCTATTTGTGGGAAACGACCCCTGCCTCCCCCTCGCCCATGTCACG
GGATTGGGCATTTTGTCGTTTTATGACGCTAGAAGCAGGCGTGGCTGCTA
TTCCGCCTTCGGCCTTCTATAAAGAAGGGCATAAAAAGCTTGCAGAAAAT
CATGCGAGGTTTGCCTTTTGTAAGGCGGACGAGAGCATTCTCGAGGCCAA
GACCCGATTTGGCAGGTGGAAGAAGGAGGGAGAGAGGGAGAGAGAGGATG
ATGGTGGAGATGGAAAGGCCTAGATCCAAATGGCTGGCGGTACCTGCGTC
CATGTCCCTCTCCGTCCTCCCTCCTCCTCCATCTCCTTCTCTCCTTCCTC
CTCCACCTCCTGGCACCTAGACTGGGGTGAACTTTCTGCGGCATTTTCCC
CTCGCACACGCCTTCTCCTTCTCAACACCCCCCAGAATCCGACGGGAAAA
GTATTTACCCGCGAAGAGCTCGAAAAGATTTCCTCCCTCGTCCAGGCTCA
CCCTCGCGCCCTCGTCCTCTCCGACGAGGTTTACGAAAACATCACATTCG
ACGAACACCAGCACACCCGCCTGGCCACCTTGCCGGGAATGTGGGAGCGA
ACATTGACGCTGTCTTCGGCGGGGAAAACGTTCAGCGTGACGGGGTGGAA
GATAGGCTGGTTGATCGGCCCAGAGAGATTGATTGGCGGCGTCATGTGCT
GTAACCAGTGGGTACAATTTTCGGTGGCGACTCCTCTACAGGCAGCGGTA
GCGGAGATGTTGACAAAAGCGAAGGAGCCGTATGAAGGTTTTCCCTCTTA
CTATGCGTGGCTGAAAGAGGAATACTCGCGCAAGCGATGGATGAACAGAA
ACCGACCGTCTGGCAAGAATTCACCCCCCTGGCCGCCCAGGTCAAGGCCG
TTAACCTCGGCCAAGGATTCCCCGATTGGCCCACCCCATCTTTCTGCAAG
TCCGCGGCGATCAACGCGATCGAGAGCAATCTTAACCAATATTGTCGCTC
CGGGGGGTTACCCGCCTTGACGTCTGCTCTCGCCCACCACTACTCCCCTC
TGTTCGAACGAGAATTAAATGCCGAGAAGGAAGTGACCGTGTCTGTGGGG
GTATCGGAAGGTCTGTTTGCGGCCATTCACTCATTAGTAAACCCGGGGGA
TGAGGTCATTTTGATCGAGCCCGCATTTGACATCTATGCCGCGCAGCTCT
CTTCTAATCGATGCCCTGACAACCGCGGGTCTCAAGCCCTTCGTCCCCGA
AGGCGGATTTTTCATAGTCGCAGACACAAGCAACATAACCGTTCCCTCCT
CCTATTTGTGGGAAACGACCCCTGCCTCCCCCTCGCCCATGTCACGGGAT
TGGGCATTTTGTCGTTTTATGACGCTAGAAGCAGGCGTGGCTGCTATTCC
GCCTTCGGCCTTCTATAAAGAAGGGCATAAAAAGCTTGCAGAAAATCATG
CGAGGTTTGCCTTTTGTAAGGCGGACGAGAGCATTCTCGAGGCCAAGACC
CGATTTGGCAGGTGGAAGAAGGAGGGAGAGAGGGAGAGAGAGGATGATGG
TGGAGATGGAAAGGCCTAGATCCAAATGGCTGGCGGTACCTGCGTCCATG
TCCCTCTCCGTCCTCCCTCCTCCTCCATCTCCTTCTCTCCTTCCTCCTCC
ACCTCCTGGCACCTAGACTGGGGTGAACTTTCTGCGGCATTTTCCCCTCG
CACACGCCTTCTCCTTCTCAACACCCCCCAGAATCCGACGGGAAAAGTAT
TTACCCGCGAAGAGCTCGAAAAGATTTCCTCCCTCGTCCAGGCTCACCCT
CGCGCCCTCGTCCTCTCCGACGAGGTTTACGAAAACATCACATTCGACGA
ACACCAGCACACCCGCCTGGCCACCTTGCCGGGAATGTGGGAGCGAACAT
TGACGCTGTCTTCGGCGGGGAAAACGTTCAGCGTGACGGGGTGGAAGATA
GGCTGGTTGATCGGCCCAGAGAGATTGATTGGCGGCGTCATGTGCTGTAA
CCAGTGGGTACAATTTTCGGTGGCGACTCCTCTACAGGCAGCGGTAGCGG
AGATGTTGACAAAAGCGAAGGAGCCGTATGAAGGTTTTCCCTCTTACTAT
GCGTGGCTGAAAGAGGAATACTCGCGCAAGCGATGGATGAACAGAAACCG
ACCGTCTGGCAAGAATTCACCCCCCTGGCCGCCCAGGTCAAGGCCGTTAA
CCTCGGCCAAGGATTCCCCGATTGGCCCACCCCATCTTTCTGCAAGTCCG
CGGCGATCAACGCGATCGAGAGCAATCTTAACCAATATTGTCGCTCCGGG
GGGTTACCCGCCTTGACGTCTGCTCTCGCCCACCACTACTCCCCTCTGTT
CGAACGAGAATTAAATGCCGAGAAGGAAGTGACCGTGTCTGTGGGGGTAT
CGGAAGGTCTGTTTGCGGCCATTCACTCATTAGTAAACCCGGGGGATGAG
GTCATTTTGATCGAGCCCGCATTTGACATCTATGCCGCGCAGCTCTCTTC
TAATCGATGCCCTGACAACCGCGGGTCTCAAGCCCTTCGTCCCCGAAGGC
GGATTTTTCATAGTCGCAGACACAAGCAACATAACCGTTCCCTCCTCCTA
TTTGTGGGAAACGACCCCTGCCTCCCCCTCGCCCATGTCACGGGATTGGG
CATTTTGTCGTTTTATGACGCTAGAAGCAGGCGTGGCTGCTATTCCGCCT
TCGGCCTTCTATAAAGAAGGGCATAAAAAGCTTGCAGAAAATCATGCGAG
GTTTGCCTTTTGTAAGGCGGACGAGAGCATTCTCGAGGCCAAGACCCGAT
TTGGCAGGTGGAAGAAGGAGGGAGAGAGGGAGAGAGAGGATGATGGTGGA
GATGGAAAGGCCTAGATCCAAATGGCTGGCGGTACCTGCGTCCATGTCCC
TCTCCGTCCTCCCTCCTCCTCCATCTCCTTCTCTCCTTCCTCCTCCACCT
CCTGGCACCTAGACTGGGGTGAACTTTCTGCGGCATTTTCCCCTCGCACA
CGCCTTCTCCTTCTCAACACCCCCCAGAATCCGACGGGAAAAGTATTTAC
CCGCGAAGAGCTCGAAAAGATTTCCTCCCTCGTCCAGGCTCACCCTCGCG
CCCTCGTCCTCTCCGACGAGGTTTACGAAAACATCACATTCGACGAACAC
CAGCACACCCGCCTGGCCACCTTGCCGGGAATGTGGGAGCGAACATTGAC
GCTGTCTTCGGCGGGGAAAACGTTCAGCGTGACGGGGTGGAAGATAGGCT
GGTTGATCGGCCCAGAGAGATTGATTGGCGGCGTCATGTGCTGTAACCAG
TGGGTACAATTTTCGGTGGCGACTCCTCTACAGGCAGCGGTAGCGGAGAT
GTTGACAAAAGCGAAGGAGCCGTATGAAGGTTTTCCCTCTTACTATGCGT
GGCTGAAAGAGGAATACTCGCGCAAGCGATGGATGAACAGAAACCGACCG
TCTGGCAAGAATTCACCCCCCTGGCCGCCCAGGTCAAGGCCGTTAACCTC
GGCCAAGGATTCCCCGATTGGCCCACCCCATCTTTCTGCAAGTCCGCGGC
GATCAACGCGATCGAGAGCAATCTTAACCAATATTGTCGCTCCGGGGGGT
TACCCGCCTTGACGTCTGCTCTCGCCCACCACTACTCCCCTCTGTTCGAA
CGAGAATTAAATGCCGAGAAGGAAGTGACCGTGTCTGTGGGGGTATCGGA
AGGTCTGTTTGCGGCCATTCACTCATTAGTAAACCCGGGGGATGAGGTCA
TTTTGATCGAGCCCGCATTTGACATCTATGCCGCGCAG back to top
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