jgi.p|Nanoce1779_2|624568, mRNA_709 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|624568
Unique Name	mRNA_709
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4707
Alignment location	scaffold_2:245992..250879 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	624654
Track	FilteredModels2
ProteinId	624568

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_2	supercontig	scaffold_2:245992..250879 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|624568	gene_709	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|624568	mRNA_709-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_709	CDS_709	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_2:245992..250879-
coding sequence from alignment at scaffold_2:245992..250879-

mRNA sequence

>mRNA_709 ID=mRNA_709|Name=jgi.p|Nanoce1779_2|624568|organism=Nannochloropsis oceanica|type=mRNA|length=4707bp
CCGCTTCTGCTGCTTCTGCTGCTTCTGCTGCTGCTGTCACTGTCGTTGCA
ACCTAGGAGGGAATCGAGTGCGTCAGAAGGGAGGTAGAGGAGGGCATTGA
GGACGCAGGCCAAGGCTTCATTCAAGGCTGCAGAAAGAATGTGCGATTGT
TCGACCTCCTCTCTCTCCCTCTCTCCCTTTTCTTCTGGGCAGCAGTTGGT
GAGGACGAGGCGAAGGACGAGGAAGAGGTTAGGAAGGTAGGCTTGGAGAA
GGGAAGGATTCGCTTTCAGGCATTCCGCGCTGAGGGATAAGCCTCCCTTT
AATAAAGCTACCTGGATCTCTTTCTCCTTCTCTTCCTCATCTGCCGCCTT
CTTCCTTCCCTTCTCCTTCCTCTTTTTCTTCTTCTTGGTCTCAATGCGGG
CGTCTGCCCCCATCTCTAGCAAGGCCGCCACTGCCTTTTTTATCGTCTTT
ACCGTTTCACCGAATATTTTCGATTCATTCGCACCCACGATGTCGTTGAA
GTCATGGAGAGAACTCGTGCCCTTGAGACAATGCCTCGTGATGAGCAACG
CGGTCTGCTGCACGCTTTCATCGGCACTGAAAGAGAGGTGCAGGCCTAAG
AGGGTAGGGAGGCCGAGGGGGAGAACGAGATGGACGGCTTGGGGGAAGTG
ATCGACAAAACCGGAAAGTAGCGCGTTGATATCAAGTAGCAACCATCGGA
GATGCACGCTAAGACTCTGGGCTGAAGAGGAGGACGAGGAGAAGGAGGAG
GATTCATCTTGGGCTTGCGTGGCGCTGCTGCTCGACGACAAGAGGGAAAG
GCGGGCATTCTCCATGATGAGTTCACCTAGACTTTTCTTGTCGCTGTTGC
AGCTGCTGCTGCTGCTGCTGCTATTGCTGGTACTACCACTGCCACTGCTG
CTGGTGCCGCTGCTGGTGTTGCTGCTACTACTACTACGACTACAACTACA
ACTACAACAACCACTACTACTGCTACAACAACATTTTTTTTTGCTAGTAC
TACTGGGTCGAGGCTCAAGGTAAAATCGAGTGAGCTCCTTAAGGATACGA
AACCCTTCCTGCCACAATTGCAAGGGCACCTCCGTCTTCAAATTAATACA
CAGCGTCAATAAATTGGTTGCATCCTGGTGTTGCCTTAGCCGGGCTTTCC
ACACCTCCTCCCTGTCTTCCTCTTCCTCTGCCTTTGGCACACAGGGGTCC
ATCAAATGTAGCAAGACAGGAACAAGCACCTCGGTCGCGGGATATACCCC
CAAGGTGTTACCGACCAGCACGAAGTCGTTGGGCTCCATTAAGGCATGCA
CCAACGCCGACAAGGCAAGGACTTGCCGTTCCCCTACCGGTGTCCATTCG
TCTGAAGGAGATGCAGTTGAGGAAGAAGAAGAGGAACGGTCGAGAAACAC
TAAATCGGCAAGGGCTTGCGTACCTCCGCAGAGGTAAAAGAGGGAAGCAT
TTAATTTATCCTGCTGTAGGCACACGACCAAGATTTTCAGGGTCAATTTA
CACAAATCTTCATCCTTCCCATCATCCCTGCTGCCGTGGCTGCTGCTCCT
GCCTTCTCGCTGCTTTCTCTCCTGCAAAATACGCGCGAAGCCTGGCAACA
GACCCAAACGGCCGGGCGCGTCTGGAGGGAGGATAACAAGGCACGCCAAC
AGCATCTGCAACGCTGCTCGTCGATGCAAAATATCGACAGGGCTTGTAAA
ATGAGGAAGAGAAGCGACGTGGGTGACCCATTTGTCGATTACGTCGAGGG
GGGCTTTACTGAGTAGTTCGGGCGGGTATGCTTTGCGGTTGTAGAGCAAT
GTCGACTTGCAGGCTTCTTTGTGCCCAGCCTTCCACGCCGTGGTCTGGCA
ATCCTTGGAGCAGAACCAGGCGGCTTTGCACTTGGCGCAGGCCAGCGTTC
GGGTCTCTTTCGTGGCCGCACAGCCGCTGCACCAATGCATGGCCGGTGGA
GAGGATGCAGGAGGCTGAGATGCAGGGAGGGGCGTCGCCATGGTGGCGTG
GCGTTGAGGCAGAGGTCTAGTCCTGTCTCGGTTGTAGTGAAAAATATGAA
GATAAAGGAGAGTAAATTGTGGAGAAGGTGACTGCATGCAGCCGTCACAC
ACACCTGAGGTCCTGAGGACCAAAGGACTCCTCCTAGGAGTCTATAGTCA
TGCCCGATTCTTTTCTTTCTTGTGGTTTCCCACAATGCTAAAATTATTGC
GTGCAACCTACGTACCCGCAGATGAAAACACCAGTGCTTACACAAGTCCG
CCACTTCTCAGGATGGCACACAAGGGAAAGCCCTCCAACAACAAATAGTT
GCATATTCTTCTTCCCTCATTTAAAAAAGAAGCTACGAGGCGGGCGAACA
CGCACGCAGTCAGAGACACGTTCATGACTGAGACGTTATCACACTACACA
CACGACCACGTCCATAGGCTTCCAAGGGACGAATTCTAGCAGCATTGGAA
GCGAATCGTAGAGCCTCCGAACTTGCCGCCTCTTCCATGGGAGCGTTTTC
AAGCTTACCGCTGCTCCTCTCTCTCGTCATGATACTCCGCACTGCCTGGG
CAAGCGGACCGGCGGCAGGTTTCCTGCGCCCTGTGCGCCCCCTGGGTGTA
GCTGCCCGGCAAAGCCACTTGGCGGTGCTGATGGGTGGCAATGGCCGCGT
TGTGGGAGGATCCATTTCGTCCTTCTCATCTTCCCTTTCCTCTTACACCA
GCCGCGGCGGCTGCAGGCGTTAGTACTCCTACCGCCCCCGCACCCTCCAA
CCCCATAACCACCACGTCTACGCCACGCACCGCAGCTCTGGCGCAAGTCC
GCGCCGAGCTCAATGAACGTGGCTTGTCTGCGTTCATAATCCCCTCGGGC
GACCCCCATTTGTCAGAGTATCCAGCCGATCACTTTTGTCGCCGTGCCTT
CATCTCAGGTTTTGACGGCTCGGCAGGTACAGCCGTGATTACTCCCACGC
AAGCCTTACTCTGGACTGACGGTCGGTACCACCTGCAAGCCGAGCAGCAA
CTGGGTCCGGATTGGACGCTGATGCGCGAGGGGCAGAAAGATGTGCCCTC
CATAGCGGCCTACCTGAAAGAGCAACTCCCCGCGGACGCAGTGGTGGGAA
TCGATCCCACGGTCCACCCCGTAAAATTCGTACAGGCCTTAGCCAAAACC
TTAAGCCTTAAAAACATTCACGTGAAGCCTTTAGCAGTCGCGGAGCTCAA
CCCGATTGATCTTGCGTGGACGAAGGCGGGCGGGAGGCCCCCCGCACCAC
AGTCGCCGGTGAGGGTGCATTCACTCGAACATGCGGGAGAGACGGTGGGG
GCGAAGGTGAGAAAATTGGGAGAAGAAATGGAGAAGGAGAAGGCTGACAT
CCTGGTTGCAGGGACTTTGGACGAGGTGGCGTGGCTTTTGAATGTGCGGG
GAAAAGATGTGCCGAATTGTCCGTTGGCTGTTGCGTATGCCGTGTTGGAA
TCGAGGGACACCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGGAAAAGCAG
TGAAAAGGAGACTAAGGCTATCATATTCGTAGAAGACTCCAAGTTGGGTA
AAGATGCTCGAGAGCACCTGACACATGAATGCCAGGCAGAAATCCGTCCG
TACGGAGAGATCTTCAGGTACCTCTCCGACGCGGTGGCTAAAGGAAAGAA
AGTCTGGCTCGACCCCGACAAGAGCAACTACGCCTTGCTCCAAGCTGCGT
CAGGCCTTCCCGCAGAGACCGTCAGAACTGATAATCCTCCTTCTTCTTTG
GTGTCAAAACCCAGCCCGATCGCACTTCTCAAAGCCCTTAAAAATGAAGC
TGAACTCAAGGGAATGCGTGCCGCCCACCTCCGAGACGGAGCCGCGGAAG
TCGAGTTCCTCGCATGGTTAGACAAAGAAGTGCAAGCCCGTTCTGTGAGT
GAAGTGGAGATAGACCGTGTGTTGACAGGCTTCAGAGCAAAACGCGAGAA
GTTCTTGGGGTTGAGTTTTGATACCATTGCGGGGTGCGGAGCGAATGGTG
CGGTGATTCATTATCGGGCCATGGAGGGTGTGTGTGGGGAAATGGGGAAG
GAGACGATGTTGTTGCTCGATTCCGGGGCGCAGTATGAGGATGGCACGAC
GGATGTGACCCGGACGGTCCACTTTGGGAATCCGAGGGAGGAGGAGAAGG
AAGCTTTCACGAGGGTCTTACAGGGGCACATTGGGATTGATACTGCGGTT
TTCCCCGAGGGAACGCCCGGCTTTGTGCTCGATGCCTATGCACGTCGGGC
GTTGTGGGCGGCGGGCTTGGATTACGCGCATGGGACTGGGCATGGGGTGG
GGGCGGCTTTGAATGTCCATGAGGGACCCCACGGTATTTCGTCTAATTTT
GCGAATTTGATACCGTTGCAGGTGGGGATGGTGGTGAGTAATGAGCCTGG
ATTTTATGCCAGTGGGCAGTATGGCATCAGAATCGAGAATTTGTTGGTGG
TGGTAGAGAAAGAGGGGTTGGGGGGTGAGGGAGGGCGGGATCCACGGAAG
AGGCGTTTTTTGGGGTTTGAGAGGTTGACACACATCCCAATCTCGAAGAA
GTTGATTCAGGTGGACTTATTGTCGAATGAGGAGGTGGAGTGGATTGATA
AATATCATAATGAGGTGCGGGAGAGGGTGGGGCCGCTGGTGACGTCGCCG
GAGGCGAAGGCCTGGTTGGTCGAGGCGACTGCACCCTTGGTGCGGTAGAG
GGGCGGT

protein sequence of jgi.p|Nanoce1779_2|624568

>mRNA_709-protein ID=mRNA_709-protein|Name=jgi.p|Nanoce1779_2|624568|organism=Nannochloropsis oceanica|type=polypeptide|length=686bp
MAALWEDPFRPSHLPFPLTPAAAAAGVSTPTAPAPSNPITTTSTPRTAAL
AQVRAELNERGLSAFIIPSGDPHLSEYPADHFCRRAFISGFDGSAGTAVI
TPTQALLWTDGRYHLQAEQQLGPDWTLMREGQKDVPSIAAYLKEQLPADA
VVGIDPTVHPVKFVQALAKTLSLKNIHVKPLAVAELNPIDLAWTKAGGRP
PAPQSPVRVHSLEHAGETVGAKVRKLGEEMEKEKADILVAGTLDEVAWLL
NVRGKDVPNCPLAVAYAVLESRDTSSSSSSSSSRKSSEKETKAIIFVEDS
KLGKDAREHLTHECQAEIRPYGEIFRYLSDAVAKGKKVWLDPDKSNYALL
QAASGLPAETVRTDNPPSSLVSKPSPIALLKALKNEAELKGMRAAHLRDG
AAEVEFLAWLDKEVQARSVSEVEIDRVLTGFRAKREKFLGLSFDTIAGCG
ANGAVIHYRAMEGVCGEMGKETMLLLDSGAQYEDGTTDVTRTVHFGNPRE
EEKEAFTRVLQGHIGIDTAVFPEGTPGFVLDAYARRALWAAGLDYAHGTG
HGVGAALNVHEGPHGISSNFANLIPLQVGMVVSNEPGFYASGQYGIRIEN
LLVVVEKEGLGGEGGRDPRKRRFLGFERLTHIPISKKLIQVDLLSNEEVE
WIDKYHNEVRERVGPLVTSPEAKAWLVEATAPLVR*

mRNA from alignment at scaffold_2:245992..250879-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_709 ID=mRNA_709|Name=jgi.p|Nanoce1779_2|624568|organism=Nannochloropsis oceanica|type=mRNA|length=4888bp|location=Sequence derived from alignment at scaffold_2:245992..250879- (Nannochloropsis oceanica)
CCGCTTCTGCTGCTTCTGCTGCTTCTGCTGCTGCTGTCACTGTCGTTGCA
ACCTAGGAGGGAATCGAGTGCGTCAGAAGGGAGGTAGAGGAGGGCATTGA
GGACGCAGGCCAAGGCTTCATTCAAGGCTGCAGAAAGAATGTGCGATTGT
TCGACCTCCTCTCTCTCCCTCTCTCCCTTTTCTTCTGGGCAGCAGTTGGT
GAGGACGAGGCGAAGGACGAGGAAGAGGTTAGGAAGGTAGGCTTGGAGAA
GGGAAGGATTCGCTTTCAGGCATTCCGCGCTGAGGGATAAGCCTCCCTTT
AATAAAGCTACCTGGATCTCTTTCTCCTTCTCTTCCTCATCTGCCGCCTT
CTTCCTTCCCTTCTCCTTCCTCTTTTTCTTCTTCTTGGTCTCAATGCGGG
CGTCTGCCCCCATCTCTAGCAAGGCCGCCACTGCCTTTTTTATCGTCTTT
ACCGTTTCACCGAATATTTTCGATTCATTCGCACCCACGATGTCGTTGAA
GTCATGGAGAGAACTCGTGCCCTTGAGACAATGCCTCGTGATGAGCAACG
CGGTCTGCTGCACGCTTTCATCGGCACTGAAAGAGAGGTGCAGGCCTAAG
AGGGTAGGGAGGCCGAGGGGGAGAACGAGATGGACGGCTTGGGGGAAGTG
ATCGACAAAACCGGAAAGTAGCGCGTTGATATCAAGTAGCAACCATCGGA
GATGCACGCTAAGACTCTGGGCTGAAGAGGAGGACGAGGAGAAGGAGGAG
GATTCATCTTGGGCTTGCGTGGCGCTGCTGCTCGACGACAAGAGGGAAAG
GCGGGCATTCTCCATGATGAGTTCACCTAGACTTTTCTTGTCGCTGTTGC
AGCTGCTGCTGCTGCTGCTGCTATTGCTGGTACTACCACTGCCACTGCTG
CTGGTGCCGCTGCTGGTGTTGCTGCTACTACTACTACGACTACAACTACA
ACTACAACAACCACTACTACTGCTACAACAACATTTTTTTTTGCTAGTAC
TACTGGGTCGAGGCTCAAGGTAAAATCGAGTGAGCTCCTTAAGGATACGA
AACCCTTCCTGCCACAATTGCAAGGGCACCTCCGTCTTCAAATTAATACA
CAGCGTCAATAAATTGGTTGCATCCTGGTGTTGCCTTAGCCGGGCTTTCC
ACACCTCCTCCCTGTCTTCCTCTTCCTCTGCCTTTGGCACACAGGGGTCC
ATCAAATGTAGCAAGACAGGAACAAGCACCTCGGTCGCGGGATATACCCC
CAAGGTGTTACCGACCAGCACGAAGTCGTTGGGCTCCATTAAGGCATGCA
CCAACGCCGACAAGGCAAGGACTTGCCGTTCCCCTACCGGTGTCCATTCG
TCTGAAGGAGATGCAGTTGAGGAAGAAGAAGAGGAACGGTCGAGAAACAC
TAAATCGGCAAGGGCTTGCGTACCTCCGCAGAGGTAAAAGAGGGAAGCAT
TTAATTTATCCTGCTGTAGGCACACGACCAAGATTTTCAGGGTCAATTTA
CACAAATCTTCATCCTTCCCATCATCCCTGCTGCCGTGGCTGCTGCTCCT
GCCTTCTCGCTGCTTTCTCTCCTGCAAAATACGCGCGAAGCCTGGCAACA
GACCCAAACGGCCGGGCGCGTCTGGAGGGAGGATAACAAGGCACGCCAAC
AGCATCTGCAACGCTGCTCGTCGATGCAAAATATCGACAGGGCTTGTAAA
ATGAGGAAGAGAAGCGACGTGGGTGACCCATTTGTCGATTACGTCGAGGG
GGGCTTTACTGAGTAGTTCGGGCGGGTATGCTTTGCGGTTGTAGAGCAAT
GTCGACTTGCAGGCTTCTTTGTGCCCAGCCTTCCACGCCGTGGTCTGGCA
ATCCTTGGAGCAGAACCAGGCGGCTTTGCACTTGGCGCAGGCCAGCGTTC
GGGTCTCTTTCGTGGCCGCACAGCCGCTGCACCAATGCATGGCCGGTGGA
GAGGATGCAGGAGGCTGAGATGCAGGGAGGGGCGTCGCCATGGTGGCGTG
GCGTTGAGGCAGAGGTCTAGTCCTGTCTCGGTTGTAGTGAAAAATATGAA
GATAAAGGAGAGTAAATTGTGGAGAAGGTGACTGCATGCAGCCGTCACAC
ACACCTGAGGTCCTGAGGACCAAAGGACTCCTCCTAGGAGTCTATAGTCA
TGCCCGATTCTTTTCTTTCTTGTGGTTTCCCACAATGCTAAAATTATTGC
GTGCAACCTACGTACCCGCAGATGAAAACACCAGTGCTTACACAAGTCCG
CCACTTCTCAGGATGGCACACAAGGGAAAGCCCTCCAACAACAAATAGTT
GCATATTCTTCTTCCCTCATTTAAAAAAGAAGCTACGAGGCGGGCGAACA
CGCACGCAGTCAGAGACACGTTCATGACTGAGACGTTATCACACTACACA
CACGACCACGTCCATAGGCTTCCAAGGGACGAATTCTAGCAGCATTGGAA
GCGAATCGTAGAGCCTCCGAACTTGCCGCCTCTTCCATGGGAGCGTTTTC
AAGCTTACCGCTGCTCCTCTCTCTCGTCATGATACTCCGCACTGCCTGGG
CAAGCGGACCGGCGGCAGGTTTCCTGCGCCCTGTGCGCCCCCTGGGTGTA
GCTGCCCGGCAAAGCCACTTGGCGGTGCTGATGGGTGGCAATGGCCGCGT
TGTGGGAGGATCCATTTCGTCCTTCTCATCTTCCCTTTCCTCTTACACCA
GGTAATAAGCCCCCAGAAAGCCATGTAACAAATTGTGCCGCGCGCGTCCC
GGTCCCTCACCATTCTCCCTTTAGACCACGTGCTCGCTTTCTTTGCCTGC
ACATTTCTTTATCTCTCGATCTCACTGATCAGTACCGCCATTCTCCCCGT
TTTCCTCAGACAGCACCCTTTCGCCACGGCAGCCGCGGCGGCTGCAGGCG
TTAGTACTCCTACCGCCCCCGCACCCTCCAACCCCATAACCACCACGTCT
ACGCCACGCACCGCAGCTCTGGCGCAAGTCCGCGCCGAGCTCAATGAACG
TGGCTTGTCTGCGTTCATAATCCCCTCGGGCGACCCCCATTTGTCAGAGT
ATCCAGCCGATCACTTTTGTCGCCGTGCCTTCATCTCAGGTTTTGACGGC
TCGGCAGGTACAGCCGTGATTACTCCCACGCAAGCCTTACTCTGGACTGA
CGGTCGGTACCACCTGCAAGCCGAGCAGCAACTGGGTCCGGATTGGACGC
TGATGCGCGAGGGGCAGAAAGATGTGCCCTCCATAGCGGCCTACCTGAAA
GAGCAACTCCCCGCGGACGCAGTGGTGGGAATCGATCCCACGGTCCACCC
CGTAAAATTCGTACAGGCCTTAGCCAAAACCTTAAGCCTTAAAAACATTC
ACGTGAAGCCTTTAGCAGTCGCGGAGCTCAACCCGATTGATCTTGCGTGG
ACGAAGGCGGGCGGGAGGCCCCCCGCACCACAGTCGCCGGTGAGGGTGCA
TTCACTCGAACATGCGGGAGAGACGGTGGGGGCGAAGGTGAGAAAATTGG
GAGAAGAAATGGAGAAGGAGAAGGCTGACATCCTGGTTGCAGGGACTTTG
GACGAGGTGGCGTGGCTTTTGAATGTGCGGGGAAAAGATGTGCCGAATTG
TCCGTTGGCTGTTGCGTATGCCGTGTTGGAATCGAGGGACACCAGTAGCA
GCAGCAGCAGCAGCAGCAGCAGGAAAAGCAGTGAAAAGGAGACTAAGGCT
ATCATATTCGTAGAAGACTCCAAGTTGGGTAAAGATGCTCGAGAGCACCT
GACACATGAATGCCAGGCAGAAATCCGTCCGTACGGAGAGATCTTCAGGT
ACCTCTCCGACGCGGTGGCTAAAGGAAAGAAAGTCTGGCTCGACCCCGAC
AAGAGCAACTACGCCTTGCTCCAAGCTGCGTCAGGCCTTCCCGCAGAGAC
CGTCAGAACTGATAATCCTCCTTCTTCTTTGGTGTCAAAACCCAGCCCGA
TCGCACTTCTCAAAGCCCTTAAAAATGAAGCTGAACTCAAGGGAATGCGT
GCCGCCCACCTCCGAGACGGAGCCGCGGAAGTCGAGTTCCTCGCATGGTT
AGACAAAGAAGTGCAAGCCCGTTCTGTGAGTGAAGTGGAGATAGACCGTG
TGTTGACAGGCTTCAGAGCAAAACGCGAGAAGTTCTTGGGGTTGAGTTTT
GATACCATTGCGGGGTGCGGAGCGAATGGTGCGGTGATTCATTATCGGGC
CATGGAGGGTGTGTGTGGGGAAATGGGGAAGGAGACGATGTTGTTGCTCG
ATTCCGGGGCGCAGTATGAGGATGGCACGACGGATGTGACCCGGACGGTC
CACTTTGGGAATCCGAGGGAGGAGGAGAAGGAAGCTTTCACGAGGGTCTT
ACAGGGGCACATTGGGATTGATACTGCGGTTTTCCCCGAGGGAACGCCCG
GCTTTGTGCTCGATGCCTATGCACGTCGGGCGTTGTGGGCGGCGGGCTTG
GATTACGCGCATGGGACTGGGCATGGGGTGGGGGCGGCTTTGAATGTCCA
TGAGGGACCCCACGGTATTTCGTCTAATTTTGCGAATTTGATACCGTTGC
AGGTGGGGATGGTGGTGAGTAATGAGCCTGGATTTTATGCCAGTGGGCAG
TATGGCATCAGAATCGAGAATTTGTTGGTGGTGGTAGAGAAAGAGGGGTT
GGGGGGTGAGGGAGGGCGGGATCCACGGAAGAGGCGTTTTTTGGGGTTTG
AGAGGTTGACACACATCCCAATCTCGAAGAAGTTGATTCAGGTGGACTTA
TTGTCGAATGAGGAGGTGGAGTGGATTGATAAATATCATAATGAGGTGCG
GGAGAGGGTGGGGCCGCTGGTGACGTCGCCGGAGGCGAAGGCCTGGTTGG
TCGAGGCGACTGCACCCTTGGTGCGGTAGAGGGGCGGT

Coding sequence (CDS) from alignment at scaffold_2:245992..250879-

>mRNA_709 ID=mRNA_709|Name=jgi.p|Nanoce1779_2|624568|organism=Nannochloropsis oceanica|type=CDS|length=4116bp|location=Sequence derived from alignment at scaffold_2:245992..250879- (Nannochloropsis oceanica)
CCGCGGCGGCTGCAGGCGTTAGTACTCCTACCGCCCCCGCACCCTCCAAC
CCCATAACCACCACGTCTACGCCACGCACCGCAGCTCTGGCGCAAGTCCG
CGCCGAGCTCAATGAACGTGGCTTGTCTGCGTTCATAATCCCCTCGGGCG
ACCCCCATTTGTCAGAGTATCCAGCCGATCACTTTTGTCGCCGTGCCTTC
ATCTCAGGTTTTGACGGCTCGGCAGGTACAGCCGTGATTACTCCCACGCA
AGCCTTACTCTGGACTGACGGTCGGTACCACCTGCAAGCCGAGCAGCAAC
TGGGTCCGGATTGGACGCTGATGCGCGAGGGGCAGAAAGATGTGCCCTCC
ATAGCGGCCTACCTGAAAGAGCAACTCCCCGCGGACGCAGTGGTGGGAAT
CGATCCCACGGTCCACCCCGTAAAATTCGTACAGGCCTTAGCCAAAACCT
TAAGCCTTAAAAACATTCACGTGAAGCCTTTAGCAGTCGCGGAGCTCAAC
CCGATTGATCTTGCGTGGACGAAGGCGGGCGGGAGGCCCCCCGCACCACA
GTCGCCGGTGAGGGTGCATTCACTCGAACATGCGGGAGAGACGGTGGGGG
CGAAGGTGAGAAAATTGGGAGAAGAAATGGAGAAGGAGAAGGCTGACATC
CTGGTTGCAGGGACTTTGGACGAGGTGGCGTGGCTTTTGAATGTGCGGGG
AAAAGATGTGCCGAATTGTCCGTTGGCTGTTGCGTATGCCGTGTTGGAAT
CGAGGGACACCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGGAAAAGCAGT
GAAAAGGAGACTAAGGCTATCATATTCGTAGAAGACTCCAAGTTGGGTAA
AGATGCTCGAGAGCACCTGACACATGAATGCCAGGCAGAAATCCGTCCGT
ACGGAGAGATCTTCAGGTACCTCTCCGACGCGGTGGCTAAAGGAAAGAAA
GTCTGGCTCGACCCCGACAAGAGCAACTACGCCTTGCTCCAAGCTGCGTC
AGGCCTTCCCGCAGAGACCGTCAGAACTGATAATCCTCCTTCTTCTTTGG
TGTCAAAACCCAGCCCGATCGCACTTCTCAAAGCCCTTAAAAATGAAGCT
GAACTCAAGGGAATGCGTGCCGCCCACCTCCGAGACGGAGCCGCGGAAGT
CGAGTTCCTCGCATGGTTAGACAAAGAAGTGCAAGCCCGTTCTGTGAGTG
AAGTGGAGATAGACCGTGTGTTGACAGGCTTCAGAGCAAAACGCGAGAAG
TTCTTGGGGTTGAGTTTTGATACCATTGCGGGGTGCGGAGCGAATGGTGC
GGTGATTCATTATCGGGCCATGGAGGGTGTGTGTGGGGAAATGGGGAAGG
AGACGATGTTGTTGCTCGATTCCGGGGCGCAGTATGAGGATGGCACGACG
GATGTGACCCGGACGGTCCACTTTGGGAATCCGAGGGAGGAGGAGAAGGA
AGCTTTCACGAGGGTCTTACAGGGGCACATTGGGATTGATACTGCGGTTT
TCCCCGAGGGAACGCCCGGCTTTGTGCTCGATGCCTATGCACGTCGGGCG
TTGTGGGCGGCGGGCTTGGATTACGCGCATGGGACTGGGCATGGGGTGGG
GGCGGCTTTGAATGTCCATGAGGGACCCCACGGTATTTCGTCTAATTTTG
CGAATTTGATACCGTTGCAGGTGGGGATGGTGGTGAGTAATGAGCCTGGA
TTTTATGCCAGTGGGCAGTATGGCATCAGAATCGAGAATTTGTTGGTGGT
GGTAGAGAAAGAGGGGTTGGGGGGTGAGGGAGGGCGGGATCCACGGAAGA
GGCGTTTTTTGGGGTTTGAGAGGTTGACACACATCCCAATCTCGAAGAAG
TTGATTCAGGTGGACTTATTGTCGAATGAGGAGGTGGAGTGGATTGATAA
ATATCATAATGAGGTGCGGGAGAGGGTGGGGCCGCTGGTGACGTCGCCGG
AGGCGAAGGCCTGGTTGGTCGAGGCGACTGCACCCTTGGTGCGGTAGATG
GCCGCGTTGTGGGAGGATCCATTTCGTCCTTCTCATCTTCCCTTTCCTCT
TACACCAGCCGCGGCGGCTGCAGGCGTTAGTACTCCTACCGCCCCCGCAC
CCTCCAACCCCATAACCACCACGTCTACGCCACGCACCGCAGCTCTGGCG
CAAGTCCGCGCCGAGCTCAATGAACGTGGCTTGTCTGCGTTCATAATCCC
CTCGGGCGACCCCCATTTGTCAGAGTATCCAGCCGATCACTTTTGTCGCC
GTGCCTTCATCTCAGGTTTTGACGGCTCGGCAGGTACAGCCGTGATTACT
CCCACGCAAGCCTTACTCTGGACTGACGGTCGGTACCACCTGCAAGCCGA
GCAGCAACTGGGTCCGGATTGGACGCTGATGCGCGAGGGGCAGAAAGATG
TGCCCTCCATAGCGGCCTACCTGAAAGAGCAACTCCCCGCGGACGCAGTG
GTGGGAATCGATCCCACGGTCCACCCCGTAAAATTCGTACAGGCCTTAGC
CAAAACCTTAAGCCTTAAAAACATTCACGTGAAGCCTTTAGCAGTCGCGG
AGCTCAACCCGATTGATCTTGCGTGGACGAAGGCGGGCGGGAGGCCCCCC
GCACCACAGTCGCCGGTGAGGGTGCATTCACTCGAACATGCGGGAGAGAC
GGTGGGGGCGAAGGTGAGAAAATTGGGAGAAGAAATGGAGAAGGAGAAGG
CTGACATCCTGGTTGCAGGGACTTTGGACGAGGTGGCGTGGCTTTTGAAT
GTGCGGGGAAAAGATGTGCCGAATTGTCCGTTGGCTGTTGCGTATGCCGT
GTTGGAATCGAGGGACACCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGGA
AAAGCAGTGAAAAGGAGACTAAGGCTATCATATTCGTAGAAGACTCCAAG
TTGGGTAAAGATGCTCGAGAGCACCTGACACATGAATGCCAGGCAGAAAT
CCGTCCGTACGGAGAGATCTTCAGGTACCTCTCCGACGCGGTGGCTAAAG
GAAAGAAAGTCTGGCTCGACCCCGACAAGAGCAACTACGCCTTGCTCCAA
GCTGCGTCAGGCCTTCCCGCAGAGACCGTCAGAACTGATAATCCTCCTTC
TTCTTTGGTGTCAAAACCCAGCCCGATCGCACTTCTCAAAGCCCTTAAAA
ATGAAGCTGAACTCAAGGGAATGCGTGCCGCCCACCTCCGAGACGGAGCC
GCGGAAGTCGAGTTCCTCGCATGGTTAGACAAAGAAGTGCAAGCCCGTTC
TGTGAGTGAAGTGGAGATAGACCGTGTGTTGACAGGCTTCAGAGCAAAAC
GCGAGAAGTTCTTGGGGTTGAGTTTTGATACCATTGCGGGGTGCGGAGCG
AATGGTGCGGTGATTCATTATCGGGCCATGGAGGGTGTGTGTGGGGAAAT
GGGGAAGGAGACGATGTTGTTGCTCGATTCCGGGGCGCAGTATGAGGATG
GCACGACGGATGTGACCCGGACGGTCCACTTTGGGAATCCGAGGGAGGAG
GAGAAGGAAGCTTTCACGAGGGTCTTACAGGGGCACATTGGGATTGATAC
TGCGGTTTTCCCCGAGGGAACGCCCGGCTTTGTGCTCGATGCCTATGCAC
GTCGGGCGTTGTGGGCGGCGGGCTTGGATTACGCGCATGGGACTGGGCAT
GGGGTGGGGGCGGCTTTGAATGTCCATGAGGGACCCCACGGTATTTCGTC
TAATTTTGCGAATTTGATACCGTTGCAGGTGGGGATGGTGGTGAGTAATG
AGCCTGGATTTTATGCCAGTGGGCAGTATGGCATCAGAATCGAGAATTTG
TTGGTGGTGGTAGAGAAAGAGGGGTTGGGGGGTGAGGGAGGGCGGGATCC
ACGGAAGAGGCGTTTTTTGGGGTTTGAGAGGTTGACACACATCCCAATCT
CGAAGAAGTTGATTCAGGTGGACTTATTGTCGAATGAGGAGGTGGAGTGG
ATTGATAAATATCATAATGAGGTGCGGGAGAGGGTGGGGCCGCTGGTGAC
GTCGCCGGAGGCGAAGGCCTGGTTGGTCGAGGCGACTGCACCCTTGGTGC
GGTAGATGGCCGCGTTGTGGGAGGATCCATTTCGTCCTTCTCATCTTCCC
TTTCCTCTTACACCAG

Synonyms

Publications