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Properties
| Property Name | Value |
|---|
| TranscriptId | 625949 |
| Track | FilteredModels2 |
| ProteinId | 625863 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:253387..255554 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7082 ID=mRNA_7082|Name=jgi.p|Nanoce1779_2|625863|organism=Nannochloropsis oceanica|type=mRNA|length=1694bp
TCGCCAAACGCGCATGAAGAAGTTATTTTCCCCCCTCTTTTCTGCAGCCG
CCGGCATTGGACTTCACTTACCTGCCTCGTCTGCACGACATGCGCTCCGA
AGCCTCGACCCATTGCGCGTATTAGCGAATTCAATGATGCCGTACCTCCC
TCGTCTGTTTATCCCTTTCATTTTCCCATCGATCCAACACACAAAACACA
AGGAGCAAGGCGTGAAGCAACAGCGTCCATGGCGGAAGTCGACCCCCGCA
TCCAGGACACGCAGGATGAAGCCGCAGACAAGCTCATTGCCGAGGAGTAT
AAAATTTGGAAGAAGAATTCCCCCTTCCTCTACGACCTAGTCATGACCCA
CGCCTTGGAGTGGCCATCTCTAACAGTGCAGTGGCTGCCTGGCGTCAAGA
CTTCGGAGAACAATCCTGAGTATGCGACACACAAACTTTTGTTCGGGACG
CACACAGCCGCGGGCGAGCAAAACTACCTAATTCAAGCCAATGTCAACCT
CCCCCTGCCCGATACCGAAATTGACGCCAAAAAATATGAAGACGAACGAG
GGGAAGTCGGTGGATTCGGGGGTAAAAACAGCAAAGTTGAAGTAAAGGTC
AAGATCGCGCACGAAGGTGAAGTGAATCGCGCGCGTTACATGCCCCAAAA
CCCTTTTGTAGTCGCGACCAAGGCACCGAGCGCCGATGTCTTTGTCTTTG
ACATAACCAAGCATCCATCTGAGCCTGGACCGAATGATGGATTTCGGCCC
GAGCATATCTGCAAAGGGCACGCGAGGGAGGGGTATGGCCTGGCCTGGTC
ACCGCATAAGGCGGGGAACCTGTTGAGTGGGAGCGATGATGCGCGCATTT
GTTTGTGGGATGTAACGGAGGCTGGGAAGGTCGTCAATGACGTCACTGTG
TTTAGGGGGCATACAAGCGTGGTGGAAGATGTCGCTTGGCATGCATCACA
CCCATATTTGTTTGGGTCCGTGAGCGATGACAAGAGTTTGGCTCTCTGGG
ACTTGAGAGAGAGTCCAGAGAAACCCATGAATCGTCGCGAGGACGCCCAT
GGCGCGTTTATCAATTGTTTGTCGTTTTCCCCGCACTCGGAATTCTTGTT
ATTGACGGGCTCGGCGGATCATATGGTGGCGCTGTGGGATATGCGCAGTT
TAACAAAGCCATTGCACTTGTTCGAGGGGCACCGGGACGAGGTCTTCCAA
GTCGATTGGGCCCCGTTCCATGAGTCTGTATTCTCATCATGTGGGGCCGA
TCGGCGGGTGAACGTTTGGGATGTGTCTAAGATTGGGGAGGAACAGAGCC
CGGAGGACGCGGAAGATGGCCCGCCGGAATTACTGTTTATCCACGGGGGG
CATACGGCGAAGGTGTCCGATGTGAGCTGGAACGCGGAGGATCCCTGGGT
GATGGCTAGTGTGGCTGAAGACAACATTTTGCAGGTCTGGCAGATGGCGG
ACAACATCTATTTGGCCGAGGATGAAGAGGAAGAGATGAGTGGGGGAGGG
GGGGGGTTAAAGGATGATGACTTGGAGGCGCCGGGTGTGGGGGTGAAGTA
GGACGAGAGAGGGAGGGGAAGAGGGAGAGGAGGATAGCGTCTACGTGGAC
GATCAACGTGGAAGAATGAGAATATCATAACGGAAAAGAAAGAAGGAGGA
CAAGAAGAACAAGAATGAACTAAGCACGAAGAAGTAGCAGACAT back to topprotein sequence of jgi.p|Nanoce1779_2|625863 >mRNA_7082-protein ID=mRNA_7082-protein|Name=jgi.p|Nanoce1779_2|625863|organism=Nannochloropsis oceanica|type=polypeptide|length=441bp
MAEVDPRIQDTQDEAADKLIAEEYKIWKKNSPFLYDLVMTHALEWPSLTV
QWLPGVKTSENNPEYATHKLLFGTHTAAGEQNYLIQANVNLPLPDTEIDA
KKYEDERGEVGGFGGKNSKVEVKVKIAHEGEVNRARYMPQNPFVVATKAP
SADVFVFDITKHPSEPGPNDGFRPEHICKGHAREGYGLAWSPHKAGNLLS
GSDDARICLWDVTEAGKVVNDVTVFRGHTSVVEDVAWHASHPYLFGSVSD
DKSLALWDLRESPEKPMNRREDAHGAFINCLSFSPHSEFLLLTGSADHMV
ALWDMRSLTKPLHLFEGHRDEVFQVDWAPFHESVFSSCGADRRVNVWDVS
KIGEEQSPEDAEDGPPELLFIHGGHTAKVSDVSWNAEDPWVMASVAEDNI
LQVWQMADNIYLAEDEEEEMSGGGGGLKDDDLEAPGVGVK* back to topmRNA from alignment at scaffold_16:253387..255554- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7082 ID=mRNA_7082|Name=jgi.p|Nanoce1779_2|625863|organism=Nannochloropsis oceanica|type=mRNA|length=2168bp|location=Sequence derived from alignment at scaffold_16:253387..255554- (Nannochloropsis oceanica)
TCGCCAAACGCGCATGAAGAAGTTATTTTCCCCCCTCTTTTCTGCAGCCG
CCGGCATTGGACTTCACTTACCTGCCTCGTCTGCACGACATGCGCTCCGA
AGCCTCGACCCATTGCGCGTATTAGCGAATTCAATGATGCCGTACCTCCC
TCGTCTGTTTATCCCTTTCATTTTCCCATCGATCCAACACACAAAACACA
AGGAGCAAGGCGTGAAGCAACAGCGTCCATGGCGGAAGTCGACCCCCGCA
TCCAGGACACGCAGGATGAAGCCGCAGACAAGCTCATTGCCGAGGAGTAT
AAGTAAGTAATATGTTATATTTGTGTTGGTGTCTTTACCTGCGCGCCCTG
GAATGAATGGATGCGTGGGTGGGGTACGGCCTGTGTGTGCACCCTGTGCT
AATCTGCCATGATACGATGGTCTTACCTTACCCATGGCCCGTCCGGTGTG
TGTAGTCAGGATTGCTCTCAGTAGCATCTGCAGCCTGAAGGGCTACTAGA
TGCGGCGTTTGTGCAGCCCTCCCCATCTTATCCCACCCTTTTCCATTCTT
TCCATCTTCCCTATCTGCTTCGCGCCAGAATTTGGAAGAAGAATTCCCCC
TTCCTCTACGACCTAGTCATGACCCACGCCTTGGAGTGGCCATCTCTAAC
AGTGCAGTGGCTGCCTGGCGTCAAGACTTCGGAGAACAATCCTGAGTATG
CGACACACAAACTTTTGTTCGGGACGCACACAGCCGCGGGTACGAATGGA
GGGATGGGATAGGGAGGAGAAAGGGAAGGAATGTGGCATAGTTGTGACTA
TTTTCTCTGCTCTTCTCTCTCTCCATATCTACATGAGCATATAATTGACT
ATTTCTCACCTAGGGACAGACGTAATTGTTAATTGTTGTGTCAGTCGTAT
CCTTACCCACTACCACCCTGCCCGACTCCAACCCCAGGCGAGCAAAACTA
CCTAATTCAAGCCAATGTCAACCTCCCCCTGCCCGATACCGAAATTGACG
CCAAAAAATATGAAGACGAACGAGGGGAAGTCGGTGGATTCGGGGGTAAA
AACAGCAAAGTTGAAGTAAAGGTCAAGATCGCGCACGAAGGTGAAGTGAA
TCGCGCGCGTTACATGCCCCAAAACCCTTTTGTAGTCGCGACCAAGGCAC
CGAGCGCCGATGTCTTTGTCTTTGACATAACCAAGCATCCATCTGAGCCT
GGACCGAATGATGGATTTCGGCCCGAGCATATCTGCAAAGGGCACGCGAG
GGAGGGGTATGGCCTGGCCTGGTCACCGCATAAGGCGGGGAACCTGTTGA
GTGGGAGCGATGATGCGCGCATTTGTTTGTGGGATGTAACGGAGGCTGGG
AAGGTCGTCAATGACGTCACTGTGTTTAGGGGGCATACAAGCGTGGTGGA
AGATGTCGCTTGGCATGCATCACACCCATATTTGTTTGGGTCCGTGAGCG
ATGACAAGAGTTTGGCTCTCTGGGACTTGAGAGAGAGTCCAGAGAAACCC
ATGAATCGTCGCGAGGACGCCCATGGCGCGTTTATCAATTGTTTGTCGTT
TTCCCCGCACTCGGAATTCTTGTTATTGACGGGCTCGGCGGATCATATGG
TGGCGCTGTGGGATATGCGCAGTTTAACAAAGCCATTGCACTTGTTCGAG
GGGCACCGGGACGAGGTCTTCCAAGTCGATTGGGCCCCGTTCCATGAGTC
TGTATTCTCATCATGTGGGGCCGATCGGCGGGTGAACGTTTGGGATGTGT
CTAAGATTGGGGAGGAACAGAGCCCGGAGGACGCGGAAGATGGCCCGCCG
GAATTACTGTTTATCCACGGGGGGCATACGGCGAAGGTGTCCGATGTGAG
CTGGAACGCGGAGGATCCCTGGGTGATGGCTAGTGTGGCTGAAGACAACA
TTTTGCAGGTCTGGCAGATGGCGGACAACATCTATTTGGCCGAGGATGAA
GAGGAAGAGATGAGTGGGGGAGGGGGGGGGTTAAAGGATGATGACTTGGA
GGCGCCGGGTGTGGGGGTGAAGTAGGACGAGAGAGGGAGGGGAAGAGGGA
GAGGAGGATAGCGTCTACGTGGACGATCAACGTGGAAGAATGAGAATATC
ATAACGGAAAAGAAAGAAGGAGGACAAGAAGAACAAGAATGAACTAAGCA
CGAAGAAGTAGCAGACAT back to topCoding sequence (CDS) from alignment at scaffold_16:253387..255554- >mRNA_7082 ID=mRNA_7082|Name=jgi.p|Nanoce1779_2|625863|organism=Nannochloropsis oceanica|type=CDS|length=3969bp|location=Sequence derived from alignment at scaffold_16:253387..255554- (Nannochloropsis oceanica)
GCGAGCAAAACTACCTAATTCAAGCCAATGTCAACCTCCCCCTGCCCGAT
ACCGAAATTGACGCCAAAAAATATGAAGACGAACGAGGGGAAGTCGGTGG
ATTCGGGGGTAAAAACAGCAAAGTTGAAGTAAAGGTCAAGATCGCGCACG
AAGGTGAAGTGAATCGCGCGCGTTACATGCCCCAAAACCCTTTTGTAGTC
GCGACCAAGGCACCGAGCGCCGATGTCTTTGTCTTTGACATAACCAAGCA
TCCATCTGAGCCTGGACCGAATGATGGATTTCGGCCCGAGCATATCTGCA
AAGGGCACGCGAGGGAGGGGTATGGCCTGGCCTGGTCACCGCATAAGGCG
GGGAACCTGTTGAGTGGGAGCGATGATGCGCGCATTTGTTTGTGGGATGT
AACGGAGGCTGGGAAGGTCGTCAATGACGTCACTGTGTTTAGGGGGCATA
CAAGCGTGGTGGAAGATGTCGCTTGGCATGCATCACACCCATATTTGTTT
GGGTCCGTGAGCGATGACAAGAGTTTGGCTCTCTGGGACTTGAGAGAGAG
TCCAGAGAAACCCATGAATCGTCGCGAGGACGCCCATGGCGCGTTTATCA
ATTGTTTGTCGTTTTCCCCGCACTCGGAATTCTTGTTATTGACGGGCTCG
GCGGATCATATGGTGGCGCTGTGGGATATGCGCAGTTTAACAAAGCCATT
GCACTTGTTCGAGGGGCACCGGGACGAGGTCTTCCAAGTCGATTGGGCCC
CGTTCCATGAGTCTGTATTCTCATCATGTGGGGCCGATCGGCGGGTGAAC
GTTTGGGATGTGTCTAAGATTGGGGAGGAACAGAGCCCGGAGGACGCGGA
AGATGGCCCGCCGGAATTACTGTTTATCCACGGGGGGCATACGGCGAAGG
TGTCCGATGTGAGCTGGAACGCGGAGGATCCCTGGGTGATGGCTAGTGTG
GCTGAAGACAACATTTTGCAGGTCTGGCAGATGGCGGACAACATCTATTT
GGCCGAGGATGAAGAGGAAGAGATGAGTGGGGGAGGGGGGGGGTTAAAGG
ATGATGACTTGGAGGCGCCGGGTGTGGGGGTGAAGTAGAATTTGGAAGAA
GAATTCCCCCTTCCTCTACGACCTAGTCATGACCCACGCCTTGGAGTGGC
CATCTCTAACAGTGCAGTGGCTGCCTGGCGTCAAGACTTCGGAGAACAAT
CCTGAGTATGCGACACACAAACTTTTGTTCGGGACGCACACAGCCGCGGA
TGGCGGAAGTCGACCCCCGCATCCAGGACACGCAGGATGAAGCCGCAGAC
AAGCTCATTGCCGAGGAGTATAAGCGAGCAAAACTACCTAATTCAAGCCA
ATGTCAACCTCCCCCTGCCCGATACCGAAATTGACGCCAAAAAATATGAA
GACGAACGAGGGGAAGTCGGTGGATTCGGGGGTAAAAACAGCAAAGTTGA
AGTAAAGGTCAAGATCGCGCACGAAGGTGAAGTGAATCGCGCGCGTTACA
TGCCCCAAAACCCTTTTGTAGTCGCGACCAAGGCACCGAGCGCCGATGTC
TTTGTCTTTGACATAACCAAGCATCCATCTGAGCCTGGACCGAATGATGG
ATTTCGGCCCGAGCATATCTGCAAAGGGCACGCGAGGGAGGGGTATGGCC
TGGCCTGGTCACCGCATAAGGCGGGGAACCTGTTGAGTGGGAGCGATGAT
GCGCGCATTTGTTTGTGGGATGTAACGGAGGCTGGGAAGGTCGTCAATGA
CGTCACTGTGTTTAGGGGGCATACAAGCGTGGTGGAAGATGTCGCTTGGC
ATGCATCACACCCATATTTGTTTGGGTCCGTGAGCGATGACAAGAGTTTG
GCTCTCTGGGACTTGAGAGAGAGTCCAGAGAAACCCATGAATCGTCGCGA
GGACGCCCATGGCGCGTTTATCAATTGTTTGTCGTTTTCCCCGCACTCGG
AATTCTTGTTATTGACGGGCTCGGCGGATCATATGGTGGCGCTGTGGGAT
ATGCGCAGTTTAACAAAGCCATTGCACTTGTTCGAGGGGCACCGGGACGA
GGTCTTCCAAGTCGATTGGGCCCCGTTCCATGAGTCTGTATTCTCATCAT
GTGGGGCCGATCGGCGGGTGAACGTTTGGGATGTGTCTAAGATTGGGGAG
GAACAGAGCCCGGAGGACGCGGAAGATGGCCCGCCGGAATTACTGTTTAT
CCACGGGGGGCATACGGCGAAGGTGTCCGATGTGAGCTGGAACGCGGAGG
ATCCCTGGGTGATGGCTAGTGTGGCTGAAGACAACATTTTGCAGGTCTGG
CAGATGGCGGACAACATCTATTTGGCCGAGGATGAAGAGGAAGAGATGAG
TGGGGGAGGGGGGGGGTTAAAGGATGATGACTTGGAGGCGCCGGGTGTGG
GGGTGAAGTAGAATTTGGAAGAAGAATTCCCCCTTCCTCTACGACCTAGT
CATGACCCACGCCTTGGAGTGGCCATCTCTAACAGTGCAGTGGCTGCCTG
GCGTCAAGACTTCGGAGAACAATCCTGAGTATGCGACACACAAACTTTTG
TTCGGGACGCACACAGCCGCGGATGGCGGAAGTCGACCCCCGCATCCAGG
ACACGCAGGATGAAGCCGCAGACAAGCTCATTGCCGAGGAGTATAAGCGA
GCAAAACTACCTAATTCAAGCCAATGTCAACCTCCCCCTGCCCGATACCG
AAATTGACGCCAAAAAATATGAAGACGAACGAGGGGAAGTCGGTGGATTC
GGGGGTAAAAACAGCAAAGTTGAAGTAAAGGTCAAGATCGCGCACGAAGG
TGAAGTGAATCGCGCGCGTTACATGCCCCAAAACCCTTTTGTAGTCGCGA
CCAAGGCACCGAGCGCCGATGTCTTTGTCTTTGACATAACCAAGCATCCA
TCTGAGCCTGGACCGAATGATGGATTTCGGCCCGAGCATATCTGCAAAGG
GCACGCGAGGGAGGGGTATGGCCTGGCCTGGTCACCGCATAAGGCGGGGA
ACCTGTTGAGTGGGAGCGATGATGCGCGCATTTGTTTGTGGGATGTAACG
GAGGCTGGGAAGGTCGTCAATGACGTCACTGTGTTTAGGGGGCATACAAG
CGTGGTGGAAGATGTCGCTTGGCATGCATCACACCCATATTTGTTTGGGT
CCGTGAGCGATGACAAGAGTTTGGCTCTCTGGGACTTGAGAGAGAGTCCA
GAGAAACCCATGAATCGTCGCGAGGACGCCCATGGCGCGTTTATCAATTG
TTTGTCGTTTTCCCCGCACTCGGAATTCTTGTTATTGACGGGCTCGGCGG
ATCATATGGTGGCGCTGTGGGATATGCGCAGTTTAACAAAGCCATTGCAC
TTGTTCGAGGGGCACCGGGACGAGGTCTTCCAAGTCGATTGGGCCCCGTT
CCATGAGTCTGTATTCTCATCATGTGGGGCCGATCGGCGGGTGAACGTTT
GGGATGTGTCTAAGATTGGGGAGGAACAGAGCCCGGAGGACGCGGAAGAT
GGCCCGCCGGAATTACTGTTTATCCACGGGGGGCATACGGCGAAGGTGTC
CGATGTGAGCTGGAACGCGGAGGATCCCTGGGTGATGGCTAGTGTGGCTG
AAGACAACATTTTGCAGGTCTGGCAGATGGCGGACAACATCTATTTGGCC
GAGGATGAAGAGGAAGAGATGAGTGGGGGAGGGGGGGGGTTAAAGGATGA
TGACTTGGAGGCGCCGGGTGTGGGGGTGAAGTAGAATTTGGAAGAAGAAT
TCCCCCTTCCTCTACGACCTAGTCATGACCCACGCCTTGGAGTGGCCATC
TCTAACAGTGCAGTGGCTGCCTGGCGTCAAGACTTCGGAGAACAATCCTG
AGTATGCGACACACAAACTTTTGTTCGGGACGCACACAGCCGCGGATGGC
GGAAGTCGACCCCCGCATCCAGGACACGCAGGATGAAGCCGCAGACAAGC
TCATTGCCGAGGAGTATAA back to top
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