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Properties
| Property Name | Value |
|---|
| TranscriptId | 595633 |
| Track | FilteredModels2 |
| ProteinId | 595547 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:251672..253309 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7081 ID=mRNA_7081|Name=jgi.p|Nanoce1779_2|595547|organism=Nannochloropsis oceanica|type=mRNA|length=1638bp
GTGGCTTTGAAGGGCTTAGGATTGGACAAAAGAGACGGATGCTTCTCCTT
TCTTGCCGGGGGGACTGGGCACGCGCTGTTATGTGGTTTATTTTGAGGGA
TTGGCTGATTAGAATGCGAAGGCACGAATCCTACCGCACAGCCCCGCTCA
CAGCTTAAAATTGTGAATATTGTTGTGATGGTGGTGCTGGATGTGAAGTC
TGATCTTCTGGGTGCCTGAATGCGCTGGCATAACGCGGGTGCGCGAGTGT
TAGTGCCAAACTATCCAATATTGAGGCGCTCGTCATCGACACACTGCTTT
TGCTTTGCCGCGCGCTTGCTGCATACACGCAGTCATCCACATGCAGCGCT
GTTCTCGAAGCAAAACACGGTCAGCATATACCCGTAACAATCCAGGAACG
GCGCTTGGTGTACTTGCTACTTTATCGGGGAAGCAACTTATCAAGATGAG
GCCGAGCAGGAGCGATAAGGCAGCGAGTCGCCAAGCAACCGTGCAGCATT
GCCCATTGAGTGGGGTGGCTTTGGACCACGCTTAGCGAACCCTACGCCTT
CTAAGTCCATGATTGTAAGCCACCCTCACCACCTGTATCATCCCACCACA
CTCAATAGCCGCTGCTCCCGCCGCCGTTGCTTGTCTACCCCTCCCACCCC
TTTTTCGGGCCATGTCATCATCACGTGTCACCACTCCTCCCCTTCTCCTC
GTCATCCTCCTTCAGTACCTTTTCCTCGTCACGTCGGCCTTCCTCGCGCC
ACCTTCTCCTTCCATCTCCATCTCCTCATCCTCCCCCCTCCACACAAATT
CAAGGACCACCCGTCTTCAGTCGTGGGTCGACACGAAGGTTGAAATCGAA
GTGCCTGCCTCGCCCGCCGATTGCTACGCCCTTTACTCCCAACTAGAAGA
ACACCCACGCTGGTCTCCCTGGTTGCGTTCCGTGCAGTTTCTGGATAAAG
TGGGGCGGATCTCGGAATGGACGTTGGAGTCGCGTGGTTTTACTGTCGCC
TGGAAAGCACGCAATACGATTGAAAACCCCGGGGAGTGTATTAGCTGGGA
GAGTATGACGGGCTTGCCAAATAAGGGATTGGTGACATTTGAGGAGCGCA
AGCCTGGGATGACAAACATGGCGTTAACAATTTCCTACAGAGTGCCGAAG
CCGATAGCGAAATTGGGAGATGTGAAGTTGGTGAAGAAGTATATTGAGGC
GACCTTGACGAGTGATTTGACGACGTTTAAGAAGGTGTTGTTGAAGGAAA
TTAGAGAAGCAAGGATAGAGGCAAGTGGGGGACTGGATGAGTGAAAAGTA
GAATTAGATGCATAAATATTTAGATTGGGCCTTGTGGGGTTATTTTCTGA
CTGCTGCTGTCGGACAGATGAGGGACAGAAAAGGCAAAAGACCACTCTTT
CTTGTAGACAAGAGGGAAAGAGATTTGTTTGGGAAGGCGCTTATTAATTT
CGGCGCTCTCTATGGGTTTCTCGTTGCACGAATTGGTGCTGGCGACGACA
GAGAAGTAGGTGGCCCAAATTGTAGGTCGGACATGTATGCGATGATATGT
CATCGAAACGCAGAAACGAGAAAGAGCAAGGAAGCAAACATAATGAAAAA
GAGTCGATATCCGGATATGAGGTACACAGAACTATGCG back to topprotein sequence of jgi.p|Nanoce1779_2|595547 >mRNA_7081-protein ID=mRNA_7081-protein|Name=jgi.p|Nanoce1779_2|595547|organism=Nannochloropsis oceanica|type=polypeptide|length=211bp
MSSSRVTTPPLLLVILLQYLFLVTSAFLAPPSPSISISSSSPLHTNSRTT
RLQSWVDTKVEIEVPASPADCYALYSQLEEHPRWSPWLRSVQFLDKVGRI
SEWTLESRGFTVAWKARNTIENPGECISWESMTGLPNKGLVTFEERKPGM
TNMALTISYRVPKPIAKLGDVKLVKKYIEATLTSDLTTFKKVLLKEIREA
RIEASGGLDE* back to topmRNA from alignment at scaffold_16:251672..253309+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7081 ID=mRNA_7081|Name=jgi.p|Nanoce1779_2|595547|organism=Nannochloropsis oceanica|type=mRNA|length=1638bp|location=Sequence derived from alignment at scaffold_16:251672..253309+ (Nannochloropsis oceanica)
GTGGCTTTGAAGGGCTTAGGATTGGACAAAAGAGACGGATGCTTCTCCTT
TCTTGCCGGGGGGACTGGGCACGCGCTGTTATGTGGTTTATTTTGAGGGA
TTGGCTGATTAGAATGCGAAGGCACGAATCCTACCGCACAGCCCCGCTCA
CAGCTTAAAATTGTGAATATTGTTGTGATGGTGGTGCTGGATGTGAAGTC
TGATCTTCTGGGTGCCTGAATGCGCTGGCATAACGCGGGTGCGCGAGTGT
TAGTGCCAAACTATCCAATATTGAGGCGCTCGTCATCGACACACTGCTTT
TGCTTTGCCGCGCGCTTGCTGCATACACGCAGTCATCCACATGCAGCGCT
GTTCTCGAAGCAAAACACGGTCAGCATATACCCGTAACAATCCAGGAACG
GCGCTTGGTGTACTTGCTACTTTATCGGGGAAGCAACTTATCAAGATGAG
GCCGAGCAGGAGCGATAAGGCAGCGAGTCGCCAAGCAACCGTGCAGCATT
GCCCATTGAGTGGGGTGGCTTTGGACCACGCTTAGCGAACCCTACGCCTT
CTAAGTCCATGATTGTAAGCCACCCTCACCACCTGTATCATCCCACCACA
CTCAATAGCCGCTGCTCCCGCCGCCGTTGCTTGTCTACCCCTCCCACCCC
TTTTTCGGGCCATGTCATCATCACGTGTCACCACTCCTCCCCTTCTCCTC
GTCATCCTCCTTCAGTACCTTTTCCTCGTCACGTCGGCCTTCCTCGCGCC
ACCTTCTCCTTCCATCTCCATCTCCTCATCCTCCCCCCTCCACACAAATT
CAAGGACCACCCGTCTTCAGTCGTGGGTCGACACGAAGGTTGAAATCGAA
GTGCCTGCCTCGCCCGCCGATTGCTACGCCCTTTACTCCCAACTAGAAGA
ACACCCACGCTGGTCTCCCTGGTTGCGTTCCGTGCAGTTTCTGGATAAAG
TGGGGCGGATCTCGGAATGGACGTTGGAGTCGCGTGGTTTTACTGTCGCC
TGGAAAGCACGCAATACGATTGAAAACCCCGGGGAGTGTATTAGCTGGGA
GAGTATGACGGGCTTGCCAAATAAGGGATTGGTGACATTTGAGGAGCGCA
AGCCTGGGATGACAAACATGGCGTTAACAATTTCCTACAGAGTGCCGAAG
CCGATAGCGAAATTGGGAGATGTGAAGTTGGTGAAGAAGTATATTGAGGC
GACCTTGACGAGTGATTTGACGACGTTTAAGAAGGTGTTGTTGAAGGAAA
TTAGAGAAGCAAGGATAGAGGCAAGTGGGGGACTGGATGAGTGAAAAGTA
GAATTAGATGCATAAATATTTAGATTGGGCCTTGTGGGGTTATTTTCTGA
CTGCTGCTGTCGGACAGATGAGGGACAGAAAAGGCAAAAGACCACTCTTT
CTTGTAGACAAGAGGGAAAGAGATTTGTTTGGGAAGGCGCTTATTAATTT
CGGCGCTCTCTATGGGTTTCTCGTTGCACGAATTGGTGCTGGCGACGACA
GAGAAGTAGGTGGCCCAAATTGTAGGTCGGACATGTATGCGATGATATGT
CATCGAAACGCAGAAACGAGAAAGAGCAAGGAAGCAAACATAATGAAAAA
GAGTCGATATCCGGATATGAGGTACACAGAACTATGCG back to topCoding sequence (CDS) from alignment at scaffold_16:251672..253309+ >mRNA_7081 ID=mRNA_7081|Name=jgi.p|Nanoce1779_2|595547|organism=Nannochloropsis oceanica|type=CDS|length=633bp|location=Sequence derived from alignment at scaffold_16:251672..253309+ (Nannochloropsis oceanica)
ATGTCATCATCACGTGTCACCACTCCTCCCCTTCTCCTCGTCATCCTCCT
TCAGTACCTTTTCCTCGTCACGTCGGCCTTCCTCGCGCCACCTTCTCCTT
CCATCTCCATCTCCTCATCCTCCCCCCTCCACACAAATTCAAGGACCACC
CGTCTTCAGTCGTGGGTCGACACGAAGGTTGAAATCGAAGTGCCTGCCTC
GCCCGCCGATTGCTACGCCCTTTACTCCCAACTAGAAGAACACCCACGCT
GGTCTCCCTGGTTGCGTTCCGTGCAGTTTCTGGATAAAGTGGGGCGGATC
TCGGAATGGACGTTGGAGTCGCGTGGTTTTACTGTCGCCTGGAAAGCACG
CAATACGATTGAAAACCCCGGGGAGTGTATTAGCTGGGAGAGTATGACGG
GCTTGCCAAATAAGGGATTGGTGACATTTGAGGAGCGCAAGCCTGGGATG
ACAAACATGGCGTTAACAATTTCCTACAGAGTGCCGAAGCCGATAGCGAA
ATTGGGAGATGTGAAGTTGGTGAAGAAGTATATTGAGGCGACCTTGACGA
GTGATTTGACGACGTTTAAGAAGGTGTTGTTGAAGGAAATTAGAGAAGCA
AGGATAGAGGCAAGTGGGGGACTGGATGAGTGA back to top
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