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Properties
| Property Name | Value |
|---|
| TranscriptId | 595592 |
| Track | FilteredModels2 |
| ProteinId | 595506 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:223758..224972 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7071 ID=mRNA_7071|Name=jgi.p|Nanoce1779_2|595506|organism=Nannochloropsis oceanica|type=mRNA|length=899bp
AGCACAGGATTTATTTTTTGGTCAAGCCTCCCTTTTGTCCATTGACTCAG
TATCCTCGGACGCCTACGCAAGGCCACCACTAGCCACCATGCCCAGGCCA
CAACATTTGCACGCTGCCATCCTCTTCTTGGCGCTGACCCTCTACTATTT
CCTACCTGCCCGCGCCTTTTTCCTTGCGCCTTTACCTCCTCAACAGTTGT
CCTTGTCGTCCGGCCGATTAAGTGCTTCATCCTCTGCCGCAGCCCCTGCC
ATAACAGACACTTCCTTCTCCTCCTCCTCCTCCTCCTCCTTATCCTCCAT
CCGCCGACTACTCTTCCGTCTTCACAGTACCCCCAGCCCTGACAGCGAGC
CAGACGAGCAAAACAAGCGGTCGAAACGCCGACGGCGCAAGGCAGGCAGT
GGTCCCCCTTCCTCGTCCTCGTCTTCCACGAAGTCCTCCACCGCGTCCTC
GCTCCCCCTTGCTGGTCCGGGGACAGCTCGGTATGATTCCACTCTGGAAG
AGCTTATTGTCGACGAACGGAAATCAGCCTTGCCTCGTCTAGAAGACCTG
AAGATTCTAAAGAGCGGAAAGGCCGTCGCGGCGGACTCAGGGAAGACGGG
AGGGAAACCTGGTATTCTCATGCCTCGAGAGCTGGAAGAAATGAAACAGA
GGGAGAAGGCCAAGGAAGCTACCAAGGGGGCACCGCCTTATTTCGATACG
ATGACAAAGATTACGTGGGGGGCGATTGCGTTTATGGTGGTGACCGAGGT
GGTGGTGGCGTTTATTCCCAAGGCGAGTACCATACCGACGCCTTAAGGGG
GACCGAGGGAGGGAGGGAGGATTTTTGGCAAGAAATTGTGTTTTGGTGGG
CTACGAGAACAATGGGAAAGGAGAAGAAAGAAATAATAGCAGAAGCGGT back to topprotein sequence of jgi.p|Nanoce1779_2|595506 >mRNA_7071-protein ID=mRNA_7071-protein|Name=jgi.p|Nanoce1779_2|595506|organism=Nannochloropsis oceanica|type=polypeptide|length=236bp
MPRPQHLHAAILFLALTLYYFLPARAFFLAPLPPQQLSLSSGRLSASSSA
AAPAITDTSFSSSSSSSLSSIRRLLFRLHSTPSPDSEPDEQNKRSKRRRR
KAGSGPPSSSSSSTKSSTASSLPLAGPGTARYDSTLEELIVDERKSALPR
LEDLKILKSGKAVAADSGKTGGKPGILMPRELEEMKQREKAKEATKGAPP
YFDTMTKITWGAIAFMVVTEVVVAFIPKASTIPTP* back to topmRNA from alignment at scaffold_16:223758..224972+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7071 ID=mRNA_7071|Name=jgi.p|Nanoce1779_2|595506|organism=Nannochloropsis oceanica|type=mRNA|length=1215bp|location=Sequence derived from alignment at scaffold_16:223758..224972+ (Nannochloropsis oceanica)
AGCACAGGATTTATTTTTTGGTCAAGCCTCCCTTTTGTCCATTGACTCAG
TATCCTCGGACGCCTACGCAAGGCCACCACTAGCCACCATGCCCAGGCCA
CAACATTTGCACGCTGCCATCCTCTTCTTGGCGCTGACCCTCTACTATTT
CCTACCTGCCCGCGCCTTTTTCCTTGCGCCTTTACCTCCTCAACAGTTGT
CCTTGTCGTCCGGCCGATTAAGTGCTTCATCCTCTGCCGCAGCCCCTGCC
ATAACAGGTAGGTGTCGACTTTGTGAGAGGAAAAAGAGATACGAGCGTGG
TATCACCGTTTGCTTCGGTACTCTTTTCGCCTGTCTTTGTGCGTGCTTAC
GTTCGTTTATCTCCGCCCTCGGTTGCTCTCCATCCTCTCCTCCCCCTCAA
TACATTACACAAGCAGTGACCACTGATATCACCCACCCTTTGATCAAGCT
TCCCATTTTCGCTGAACCACAATACACCGATTTTCTTTGCTATATCCTAT
CTCTCATCCCATCAACGGCAACCACCAACACTCAACGCTCCCCACACCCT
CCTCACCTCTTCACTATACACAGACACTTCCTTCTCCTCCTCCTCCTCCT
CCTCCTTATCCTCCATCCGCCGACTACTCTTCCGTCTTCACAGTACCCCC
AGCCCTGACAGCGAGCCAGACGAGCAAAACAAGCGGTCGAAACGCCGACG
GCGCAAGGCAGGCAGTGGTCCCCCTTCCTCGTCCTCGTCTTCCACGAAGT
CCTCCACCGCGTCCTCGCTCCCCCTTGCTGGTCCGGGGACAGCTCGGTAT
GATTCCACTCTGGAAGAGCTTATTGTCGACGAACGGAAATCAGCCTTGCC
TCGTCTAGAAGACCTGAAGATTCTAAAGAGCGGAAAGGCCGTCGCGGCGG
ACTCAGGGAAGACGGGAGGGAAACCTGGTATTCTCATGCCTCGAGAGCTG
GAAGAAATGAAACAGAGGGAGAAGGCCAAGGAAGCTACCAAGGGGGCACC
GCCTTATTTCGATACGATGACAAAGATTACGTGGGGGGCGATTGCGTTTA
TGGTGGTGACCGAGGTGGTGGTGGCGTTTATTCCCAAGGCGAGTACCATA
CCGACGCCTTAAGGGGGACCGAGGGAGGGAGGGAGGATTTTTGGCAAGAA
ATTGTGTTTTGGTGGGCTACGAGAACAATGGGAAAGGAGAAGAAAGAAAT
AATAGCAGAAGCGGT back to topCoding sequence (CDS) from alignment at scaffold_16:223758..224972+ >mRNA_7071 ID=mRNA_7071|Name=jgi.p|Nanoce1779_2|595506|organism=Nannochloropsis oceanica|type=CDS|length=1416bp|location=Sequence derived from alignment at scaffold_16:223758..224972+ (Nannochloropsis oceanica)
ATGCCCAGGCCACAACATTTGCACGCTGCCATCCTCTTCTTGGCGCTGAC
CCTCTACTATTTCCTACCTGCCCGCGCCTTTTTCCTTGCGCCTTTACCTC
CTCAACAGTTGTCCTTGTCGTCCGGCCGATTAAGTGCTTCATCCTCTGCC
GCAGCCCCTGCCATAACAGACACTTCCTTCTCCTCCTCCTCCTCCTCCTC
CTTATCCTCCATCCGCCGACTACTCTTCCGTCTTCACAGTACCCCCAGCC
CTGACAGCGAGCCAGACGAGCAAAACAAGCGGTCGAAACGCCGACGGCGC
AAGGCAGGCAGTGGTCCCCCTTCCTCGTCCTCGTCTTCCACGAAGTCCTC
CACCGCGTCCTCGCTCCCCCTTGCTGGTCCGGGGACAGCTCGGTATGATT
CCACTCTGGAAGAGCTTATTGTCGACGAACGGAAATCAGCCTTGCCTCGT
CTAGAAGACCTGAAGATTCTAAAGAGCGGAAAGGCCGTCGCGGCGGACTC
AGGGAAGACGGGAGGGAAACCTGGTATTCTCATGCCTCGAGAGCTGGAAG
AAATGAAACAGAGGGAGAAGGCCAAGGAAGCTACCAAGGGGGCACCGCCT
TATTTCGATACGATGACAAAGATTACGTGGGGGGCGATTGCGTTTATGGT
GGTGACCGAGGTGGTGGTGGCGTTTATTCCCAAGGCGAGTACCATACCGA
CGCCTTAAATGCCCAGGCCACAACATTTGCACGCTGCCATCCTCTTCTTG
GCGCTGACCCTCTACTATTTCCTACCTGCCCGCGCCTTTTTCCTTGCGCC
TTTACCTCCTCAACAGTTGTCCTTGTCGTCCGGCCGATTAAGTGCTTCAT
CCTCTGCCGCAGCCCCTGCCATAACAGACACTTCCTTCTCCTCCTCCTCC
TCCTCCTCCTTATCCTCCATCCGCCGACTACTCTTCCGTCTTCACAGTAC
CCCCAGCCCTGACAGCGAGCCAGACGAGCAAAACAAGCGGTCGAAACGCC
GACGGCGCAAGGCAGGCAGTGGTCCCCCTTCCTCGTCCTCGTCTTCCACG
AAGTCCTCCACCGCGTCCTCGCTCCCCCTTGCTGGTCCGGGGACAGCTCG
GTATGATTCCACTCTGGAAGAGCTTATTGTCGACGAACGGAAATCAGCCT
TGCCTCGTCTAGAAGACCTGAAGATTCTAAAGAGCGGAAAGGCCGTCGCG
GCGGACTCAGGGAAGACGGGAGGGAAACCTGGTATTCTCATGCCTCGAGA
GCTGGAAGAAATGAAACAGAGGGAGAAGGCCAAGGAAGCTACCAAGGGGG
CACCGCCTTATTTCGATACGATGACAAAGATTACGTGGGGGGCGATTGCG
TTTATGGTGGTGACCGAGGTGGTGGTGGCGTTTATTCCCAAGGCGAGTAC
CATACCGACGCCTTAA back to top
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