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Properties
Property Name | Value |
TranscriptId | 672168 |
Track | FilteredModels2 |
ProteinId | 672082 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_16 | supercontig | scaffold_16:215015..217699 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7067 ID=mRNA_7067|Name=jgi.p|Nanoce1779_2|672082|organism=Nannochloropsis oceanica|type=mRNA|length=2268bp ACAGGCATTCTAGCTTTCCATAAGAGGAAGGGCCAGACGAGTCGAGGCAC ATTTGTCTTCTAGCCAGGGAGGAGCTCGATCTCAAAGACCAGAGGAGGCC AAGGAGCCATTCTCGTCAAGTCGGCCCCAATTGCAACAGCATCAGCATCG CTCACCACCACTCCCACTGCGATTCCAGCCAGCAGCAGCAGTACGACGAT ACACGATGGGTAAATGGGGAGGCCGCGCGGGACCTCTGTCGGGTGTGGAC GCCCAACGGGCCATGCTTGACGAGATGATGGGCATGAATCGTAACCTGGA CAACCCGGACGCGGAGATTGCGGACTATCGCGACGAGCGCGTCTGCAAGC AGTTTCTCCTCGGTTGCTGCCCGCACGAAGTCTTCAGCAAGACCAAAATT GATCTCGGGCAATGCGAGCGCCTCCATGACGAAGGCCTGCAACAGAAATT TGAAGCCGACCTGAAGAAGGAAGAGGAGGAATGGGAGGGAGGGAGGGAGG GAGGGCCCGTGGCAGAGGACAGGAAGAGGTATGAGAGAGACTTGGAAATG GTGTTACGAGAGTATATTTATGAGGCGGATAGGAAGATAGCGAGGGGCCG GAGGAGGACAGACGTTCCGATTGGTGAGCAGCAGCAGCAACAGCAGCATG AACAGCGCGAGCCGCTATCGTCGCAGCATCAACAGCTGGGAGGAGGAGGA GTTGGGGTGGGTACGCTTGGAGTAGGAGGAAGGGAGGGGGGAAGAAGTGA CTTGTCGTCGAATCCGGAGATACTGAGATTACAGGGAGAGATCGAGGAGG TGCTGGCCAAGGCAGAGGCAGCGGGGGAGGAAGGGGAGGTGGATGAAGCG CAGGAGTTGAGCGAAAAAGCAGAAGAACTCAAGAGGCAGAAAAATAAAAT TCAAGAAAGGTTGCTTGCGGAGGCTGCGACCACCGCTCCTGCTAATGCTG CCGCTCCTTCTTCGTCATCGTCGTCGTCGGACCCGAACCAAAGGTTGCGG GTGTGTGATGGGGCAGTTGGGGGGGAAGAGGAGGAGGAGGAGGGGGGAGG GAGCGAGGTGGGAGGGGGAGGAGTGGAAGTAGGGAGAGGGAGCGAAGAGG GGGACGGAGCAGGAGCAGGAGTCGGGAGAGGGGGAGGGAGGGAGGGAGGG GAGGGAGGGATTATCGTGAAGATAGAGAGAGGGAGCGTGGTGGAGGGGAC AGGTATAGGGAAAGGGGGAGAGATCGAGATAACGGACGGGGAGGGAGGGA TAGGAGTCGAAGCCGAAGTAGGGAGCGAGGAGGGAGGAGGTATTGAGGGA AGAGGGTGAAGAGGGGCTGAGGGGTGAAAGGCACGGGAAAGCAGGGCTGG GTGGCATCAGTTGAGACCCAAAGTAACACGCACCGCAATGCGGACAACAA CATTGAGGCGGGCGATACTACTACTTGAAAAGAGAACGAAACAAATATGT CTGAAAGGCTCTATCTTTCTCGTCTATGTGCATGCGTTTAATTGGTGATA GAGTTGAGAGATTTTCCACACCAGCAGTCGTGGCGTTCCCCGCTATCACC ATGAGTCGACTTATGATGCGGAAATGATTTTGGAAATACGCATTGAATGC TTTTTCCCTCGAAATGGAACGAAAACTCTCCAACAATAGAAGTGCTTGCA TTTTACTCGAAATGCGCTACCATCATATGAATCAAGCACCGCTCCATTCT CATTCGTCTTCTTTCCTTCTTTGATCTCTGCCTCCTCTCCCTCTTTTCTC CCTATCCCTCACATTCAATCCATCCCTGCAATCGCCCGGATCAGCGCCAC GTGACCTTCTCCTAACGGCACACTCTCTTTATCCCGCACACTCGCACACA CCACCTCCATCTCGCTCATATCCAAGAACTCCGCCAGAAACAACAACAAA TGGAAATCGCCCAACAAGTCCACAAACCGCCATCCGGCCTTACCCGCTTG TGATAATTGTGCAGCCATAGTCTTGGCGTCCGGGAGCTCATCCAGTCGGT TCCACTTGGGGTATTGGGATAAAAACAACTTGCTCTCTTCGCTCCCTACG GGGACATTCACCAAAAAGAAGTTGTTGTCCACTGTCTTGGCAGCACGACC CTCCACAATCGCGGTGAAGGACTCGTTCACGTGCATGGAGCCTGGCTCCT CCCCGGGTTCCACCGCACCTTCTGCCACCATCTCCATACACTGCAAACTC ACTTGGAAGGCATCGAAATGCGCAACCGATGGCGCCGTCGGCCCTCCTTC CTTCCCTTCCTCCCCCTC back to topprotein sequence of jgi.p|Nanoce1779_2|672082 >mRNA_7067-protein ID=mRNA_7067-protein|Name=jgi.p|Nanoce1779_2|672082|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp MGKWGGRAGPLSGVDAQRAMLDEMMGMNRNLDNPDAEIADYRDERVCKQF LLGCCPHEVFSKTKIDLGQCERLHDEGLQQKFEADLKKEEEEWEGGREGG PVAEDRKRYERDLEMVLREYIYEADRKIARGRRRTDVPIGEQQQQQQHEQ REPLSSQHQQLGGGGVGVGTLGVGGREGGRSDLSSNPEILRLQGEIEEVL AKAEAAGEEGEVDEAQELSEKAEELKRQKNKIQERLLAEAATTAPANAAA PSSSSSSSDPNQRLRVCDGAVGGEEEEEEGGGSEVGGGGVEVGRGSEEGD GAGAGVGRGGGREGGEGGIIVKIERGSVVEGTGIGKGGEIEITDGEGGIG VEAEVGSEEGGGIEGRG* back to topmRNA from alignment at scaffold_16:215015..217699+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7067 ID=mRNA_7067|Name=jgi.p|Nanoce1779_2|672082|organism=Nannochloropsis oceanica|type=mRNA|length=2685bp|location=Sequence derived from alignment at scaffold_16:215015..217699+ (Nannochloropsis oceanica) ACAGGCATTCTAGCTTTCCATAAGAGGAAGGGCCAGACGAGTCGAGGCAC
ATTTGTCTTCTAGCCAGGGAGGAGCTCGATCTCAAAGACCAGAGGAGGCC
AAGGAGCCATTCTCGTCAAGTCGGCCCCAATTGCAACAGCATCAGCATCG
CTCACCACCACTCCCACTGCGATTCCAGCCAGCAGCAGCAGTACGACGAT
ACACGATGGGTAAATGGGGAGGCCGCGCGGGACCTCTGTCGGGTGTGGAC
GCCCAACGGGCCATGCTTGACGAGATGATGGGCATGAATCGTAACCTGGA
CAACCCGGACGCGGAGATTGCGGACTATCGCGACGAGGTACGTCTTCTGG
TAGCATGTGCCCATCCCTTTTAAATCTATTTCTACACCTTGGCTCTGGGT
AGACAAGCCTTTTGAGATAGCGCTACGTGCCTGCCGGTCTTGCTTCCCCT
CTCCACTTCACACCAACCCCTTTCCCCATACAGCGCGTCTGCAAGCAGTT
TCTCCTCGGTTGCTGCCCGCACGAAGTCTTCAGCAAGACCAAAATTGATC
TCGGGCAATGCGAGCGCCTCCATGACGAAGGCCTGCAACAGAAATTTGAA
GCCGACCTGAAGAAGGAAGAGGAGGAATGGGAGGGAGGGAGGGAGGGAGG
GCCCGTGGCAGAGGACAGGAAGAGGTATGAGAGAGACTTGGAAATGGTGT
TACGAGAGTATATTTATGAGGCGGATAGGAAGATAGCGAGGGGCCGGAGG
AGGACAGACGTTCCGATTGGTGAGCAGCAGCAGCAACAGCAGCATGAACA
GCGCGAGCCGCTATCGTCGCAGCATCAACAGCTGGGAGGAGGAGGAGTTG
GGGTGGGTACGCTTGGAGTAGGAGGAAGGGAGGGGGGAAGAAGTGACTTG
TCGTCGAATCCGGAGATACTGAGATTACAGGGAGAGATCGAGGAGGTGCT
GGCCAAGGCAGAGGCAGCGGGGGAGGAAGGGGAGGTGGATGAAGCGCAGG
AGTTGAGCGAAAAAGCAGAAGAACTCAAGAGGCAGAAAAATAAAATTCAA
GAAAGGTTGCTTGCGGAGGGTATTGAGAAAGGAGGGATGGGAGGGAGAGA
GGGAGGGCATCCAGGAGCGAAGGGCCCTGGTGGTATTCCATCCCTCCCTC
CTACCTCCACAGCTGCGACCACCGCTCCTGCTAATGCTGCCGCTCCTTCT
TCGTCATCGTCGTCGTCGGACCCGAACCAAAGGTTGCGGGTGTGTGATGT
ATGTGGAGCGTTTCTATCCATCAGTGACAACGACAAGCGACTGGCCGACC
ATTTCGGAGGGAAGTTGCACTTGGGCTATGTCCTGTTGAGGGAGAAGATG
AAGGAGATCCAGGACAGAAGGAGGGAAGGGGGGAAAAGGAGGGGAAGGGA
TGGGGGGGGTTCGGATGGTCCTGAAGGGGGCAGTTGGGGGGGAAGAGGAG
GAGGAGGAGGGGGGAGGGAGCGAGGTGGGAGGGGGAGGAGTGGAAGTAGG
GAGAGGGAGCGAAGAGGGGGACGGAGCAGGAGCAGGAGTCGGGAGAGGGG
GAGGGAGGGAGGGAGGGGAGGGAGGGATTATCGTGAAGATAGAGAGAGGG
AGCGTGGTGGAGGGGACAGGTATAGGGAAAGGGGGAGAGATCGAGATAAC
GGACGGGGAGGGAGGGATAGGAGTCGAAGCCGAAGTAGGGAGCGAGGAGG
GAGGAGGTATTGAGGGAAGAGGGTGAAGAGGGGCTGAGGGGTGAAAGGCA
CGGGAAAGCAGGGCTGGGTGGCATCAGTTGAGACCCAAAGTAACACGCAC
CGCAATGCGGACAACAACATTGAGGCGGGCGATACTACTACTTGAAAAGA
GAACGAAACAAATATGTCTGAAAGGCTCTATCTTTCTCGTCTATGTGCAT
GCGTTTAATTGGTGATAGAGTTGAGAGATTTTCCACACCAGCAGTCGTGG
CGTTCCCCGCTATCACCATGAGTCGACTTATGATGCGGAAATGATTTTGG
AAATACGCATTGAATGCTTTTTCCCTCGAAATGGAACGAAAACTCTCCAA
CAATAGAAGTGCTTGCATTTTACTCGAAATGCGCTACCATCATATGAATC
AAGCACCGCTCCATTCTCATTCGTCTTCTTTCCTTCTTTGATCTCTGCCT
CCTCTCCCTCTTTTCTCCCTATCCCTCACATTCAATCCATCCCTGCAATC
GCCCGGATCAGCGCCACGTGACCTTCTCCTAACGGCACACTCTCTTTATC
CCGCACACTCGCACACACCACCTCCATCTCGCTCATATCCAAGAACTCCG
CCAGAAACAACAACAAATGGAAATCGCCCAACAAGTCCACAAACCGCCAT
CCGGCCTTACCCGCTTGTGATAATTGTGCAGCCATAGTCTTGGCGTCCGG
GAGCTCATCCAGTCGGTTCCACTTGGGGTATTGGGATAAAAACAACTTGC
TCTCTTCGCTCCCTACGGGGACATTCACCAAAAAGAAGTTGTTGTCCACT
GTCTTGGCAGCACGACCCTCCACAATCGCGGTGAAGGACTCGTTCACGTG
CATGGAGCCTGGCTCCTCCCCGGGTTCCACCGCACCTTCTGCCACCATCT
CCATACACTGCAAACTCACTTGGAAGGCATCGAAATGCGCAACCGATGGC
GCCGTCGGCCCTCCTTCCTTCCCTTCCTCCCCCTC back to topCoding sequence (CDS) from alignment at scaffold_16:215015..217699+ >mRNA_7067 ID=mRNA_7067|Name=jgi.p|Nanoce1779_2|672082|organism=Nannochloropsis oceanica|type=CDS|length=4416bp|location=Sequence derived from alignment at scaffold_16:215015..217699+ (Nannochloropsis oceanica) ATGGGTAAATGGGGAGGCCGCGCGGGACCTCTGTCGGGTGTGGACGCCCA ACGGGCCATGCTTGACGAGATGATGGGCATGAATCGTAACCTGGACAACC CGGACGCGGAGATTGCGGACTATCGCGACGAGCGCGTCTGCAAGCAGTTT CTCCTCGGTTGCTGCCCGCACGAAGTCTTCAGCAAGACCAAAATTGATCT CGGGCAATGCGAGCGCCTCCATGACGAAGGCCTGCAACAGAAATTTGAAG CCGACCTGAAGAAGGAAGAGGAGGAATGGGAGGGAGGGAGGGAGGGAGGG CCCGTGGCAGAGGACAGGAAGAGGTATGAGAGAGACTTGGAAATGGTGTT ACGAGAGTATATTTATGAGGCGGATAGGAAGATAGCGAGGGGCCGGAGGA GGACAGACGTTCCGATTGGTGAGCAGCAGCAGCAACAGCAGCATGAACAG CGCGAGCCGCTATCGTCGCAGCATCAACAGCTGGGAGGAGGAGGAGTTGG GGTGGGTACGCTTGGAGTAGGAGGAAGGGAGGGGGGAAGAAGTGACTTGT CGTCGAATCCGGAGATACTGAGATTACAGGGAGAGATCGAGGAGGTGCTG GCCAAGGCAGAGGCAGCGGGGGAGGAAGGGGAGGTGGATGAAGCGCAGGA GTTGAGCGAAAAAGCAGAAGAACTCAAGAGGCAGAAAAATAAAATTCAAG AAAGGTTGCTTGCGGAGGCTGCGACCACCGCTCCTGCTAATGCTGCCGCT CCTTCTTCGTCATCGTCGTCGTCGGACCCGAACCAAAGGTTGCGGGTGTG TGATGGGGCAGTTGGGGGGGAAGAGGAGGAGGAGGAGGGGGGAGGGAGCG AGGTGGGAGGGGGAGGAGTGGAAGTAGGGAGAGGGAGCGAAGAGGGGGAC GGAGCAGGAGCAGGAGTCGGGAGAGGGGGAGGGAGGGAGGGAGGGGAGGG AGGGATTATCGTGAAGATAGAGAGAGGGAGCGTGGTGGAGGGGACAGGTA TAGGGAAAGGGGGAGAGATCGAGATAACGGACGGGGAGGGAGGGATAGGA GTCGAAGCCGAAGTAGGGAGCGAGGAGGGAGGAGGTATTGAGGGAAGAGG GTGAATGGGTAAATGGGGAGGCCGCGCGGGACCTCTGTCGGGTGTGGACG CCCAACGGGCCATGCTTGACGAGATGATGGGCATGAATCGTAACCTGGAC AACCCGGACGCGGAGATTGCGGACTATCGCGACGAGCGCGTCTGCAAGCA GTTTCTCCTCGGTTGCTGCCCGCACGAAGTCTTCAGCAAGACCAAAATTG ATCTCGGGCAATGCGAGCGCCTCCATGACGAAGGCCTGCAACAGAAATTT GAAGCCGACCTGAAGAAGGAAGAGGAGGAATGGGAGGGAGGGAGGGAGGG AGGGCCCGTGGCAGAGGACAGGAAGAGGTATGAGAGAGACTTGGAAATGG TGTTACGAGAGTATATTTATGAGGCGGATAGGAAGATAGCGAGGGGCCGG AGGAGGACAGACGTTCCGATTGGTGAGCAGCAGCAGCAACAGCAGCATGA ACAGCGCGAGCCGCTATCGTCGCAGCATCAACAGCTGGGAGGAGGAGGAG TTGGGGTGGGTACGCTTGGAGTAGGAGGAAGGGAGGGGGGAAGAAGTGAC TTGTCGTCGAATCCGGAGATACTGAGATTACAGGGAGAGATCGAGGAGGT GCTGGCCAAGGCAGAGGCAGCGGGGGAGGAAGGGGAGGTGGATGAAGCGC AGGAGTTGAGCGAAAAAGCAGAAGAACTCAAGAGGCAGAAAAATAAAATT CAAGAAAGGTTGCTTGCGGAGGCTGCGACCACCGCTCCTGCTAATGCTGC CGCTCCTTCTTCGTCATCGTCGTCGTCGGACCCGAACCAAAGGTTGCGGG TGTGTGATGGGGCAGTTGGGGGGGAAGAGGAGGAGGAGGAGGGGGGAGGG AGCGAGGTGGGAGGGGGAGGAGTGGAAGTAGGGAGAGGGAGCGAAGAGGG GGACGGAGCAGGAGCAGGAGTCGGGAGAGGGGGAGGGAGGGAGGGAGGGG AGGGAGGGATTATCGTGAAGATAGAGAGAGGGAGCGTGGTGGAGGGGACA GGTATAGGGAAAGGGGGAGAGATCGAGATAACGGACGGGGAGGGAGGGAT AGGAGTCGAAGCCGAAGTAGGGAGCGAGGAGGGAGGAGGTATTGAGGGAA GAGGGTGAATGGGTAAATGGGGAGGCCGCGCGGGACCTCTGTCGGGTGTG GACGCCCAACGGGCCATGCTTGACGAGATGATGGGCATGAATCGTAACCT GGACAACCCGGACGCGGAGATTGCGGACTATCGCGACGAGCGCGTCTGCA AGCAGTTTCTCCTCGGTTGCTGCCCGCACGAAGTCTTCAGCAAGACCAAA ATTGATCTCGGGCAATGCGAGCGCCTCCATGACGAAGGCCTGCAACAGAA ATTTGAAGCCGACCTGAAGAAGGAAGAGGAGGAATGGGAGGGAGGGAGGG AGGGAGGGCCCGTGGCAGAGGACAGGAAGAGGTATGAGAGAGACTTGGAA ATGGTGTTACGAGAGTATATTTATGAGGCGGATAGGAAGATAGCGAGGGG CCGGAGGAGGACAGACGTTCCGATTGGTGAGCAGCAGCAGCAACAGCAGC ATGAACAGCGCGAGCCGCTATCGTCGCAGCATCAACAGCTGGGAGGAGGA GGAGTTGGGGTGGGTACGCTTGGAGTAGGAGGAAGGGAGGGGGGAAGAAG TGACTTGTCGTCGAATCCGGAGATACTGAGATTACAGGGAGAGATCGAGG AGGTGCTGGCCAAGGCAGAGGCAGCGGGGGAGGAAGGGGAGGTGGATGAA GCGCAGGAGTTGAGCGAAAAAGCAGAAGAACTCAAGAGGCAGAAAAATAA AATTCAAGAAAGGTTGCTTGCGGAGGCTGCGACCACCGCTCCTGCTAATG CTGCCGCTCCTTCTTCGTCATCGTCGTCGTCGGACCCGAACCAAAGGTTG CGGGTGTGTGATGGGGCAGTTGGGGGGGAAGAGGAGGAGGAGGAGGGGGG AGGGAGCGAGGTGGGAGGGGGAGGAGTGGAAGTAGGGAGAGGGAGCGAAG AGGGGGACGGAGCAGGAGCAGGAGTCGGGAGAGGGGGAGGGAGGGAGGGA GGGGAGGGAGGGATTATCGTGAAGATAGAGAGAGGGAGCGTGGTGGAGGG GACAGGTATAGGGAAAGGGGGAGAGATCGAGATAACGGACGGGGAGGGAG GGATAGGAGTCGAAGCCGAAGTAGGGAGCGAGGAGGGAGGAGGTATTGAG GGAAGAGGGTGAATGGGTAAATGGGGAGGCCGCGCGGGACCTCTGTCGGG TGTGGACGCCCAACGGGCCATGCTTGACGAGATGATGGGCATGAATCGTA ACCTGGACAACCCGGACGCGGAGATTGCGGACTATCGCGACGAGCGCGTC TGCAAGCAGTTTCTCCTCGGTTGCTGCCCGCACGAAGTCTTCAGCAAGAC CAAAATTGATCTCGGGCAATGCGAGCGCCTCCATGACGAAGGCCTGCAAC AGAAATTTGAAGCCGACCTGAAGAAGGAAGAGGAGGAATGGGAGGGAGGG AGGGAGGGAGGGCCCGTGGCAGAGGACAGGAAGAGGTATGAGAGAGACTT GGAAATGGTGTTACGAGAGTATATTTATGAGGCGGATAGGAAGATAGCGA GGGGCCGGAGGAGGACAGACGTTCCGATTGGTGAGCAGCAGCAGCAACAG CAGCATGAACAGCGCGAGCCGCTATCGTCGCAGCATCAACAGCTGGGAGG AGGAGGAGTTGGGGTGGGTACGCTTGGAGTAGGAGGAAGGGAGGGGGGAA GAAGTGACTTGTCGTCGAATCCGGAGATACTGAGATTACAGGGAGAGATC GAGGAGGTGCTGGCCAAGGCAGAGGCAGCGGGGGAGGAAGGGGAGGTGGA TGAAGCGCAGGAGTTGAGCGAAAAAGCAGAAGAACTCAAGAGGCAGAAAA ATAAAATTCAAGAAAGGTTGCTTGCGGAGGCTGCGACCACCGCTCCTGCT AATGCTGCCGCTCCTTCTTCGTCATCGTCGTCGTCGGACCCGAACCAAAG GTTGCGGGTGTGTGATGGGGCAGTTGGGGGGGAAGAGGAGGAGGAGGAGG GGGGAGGGAGCGAGGTGGGAGGGGGAGGAGTGGAAGTAGGGAGAGGGAGC GAAGAGGGGGACGGAGCAGGAGCAGGAGTCGGGAGAGGGGGAGGGAGGGA GGGAGGGGAGGGAGGGATTATCGTGAAGATAGAGAGAGGGAGCGTGGTGG AGGGGACAGGTATAGGGAAAGGGGGAGAGATCGAGATAACGGACGGGGAG GGAGGGATAGGAGTCGAAGCCGAAGTAGGGAGCGAGGAGGGAGGAGGTAT TGAGGGAAGAGGGTGA back to top
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