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Properties
| Property Name | Value |
|---|
| TranscriptId | 625942 |
| Track | FilteredModels2 |
| ProteinId | 625856 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:133104..135305 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7039 ID=mRNA_7039|Name=jgi.p|Nanoce1779_2|625856|organism=Nannochloropsis oceanica|type=mRNA|length=1065bp
AGGAATCTCCATCCCCACCACCGCCACTTCTACAATGCCGGGCACTCTTT
TGGGCATGGGAAACCCCCTCCTCGACATCTCCGCGGAAGTGTCCCAGGAA
GTTTTGGACAAGTACGAGCTCAAGCTGGACTCTGCAATTCTTGCAGAGGA
TAAGCACCTGCCCCTGTACAAGGAGCTGGTGGACTCCTACAAGGTCCAAT
ATATTGCGGGCGGGGCCACCCAGAACGCCATCCGTGTCGCTCAGTGGATG
TTGCAGACTCCTAAGTCTACCAGCTTCTTCGGCTGCATCGGCAAAGACAC
TTTCGGTGCCCAGCTGCAAAAGTGTGCGGAGGATGACGGGGTCAACGCCT
ACTACAAAGAGGACACCGAGGCAGCCACGGGAACGTGTGCCGTGCTGGTG
AAGGATGGAGAAAGGTCGTTGTGCGCCAATTTAAGTGCTGCCAACAAATT
CACTGCAGACCACCTGGCGTCAGTCAAGGCAAAGGAAATGATCGCAGAGG
CCAAAATGTTTTACGTGGCTTCCTTTTTTTTGACGGTGTCGGTGGAGTCT
CTGTTGGAGGTGGCGACCCATGCGGTAGAGCACAACAAGATCTTCGCCAT
GAACCTCTCCGCGCCCTTTCTCATCCAATTTTTTTCCGAGCAAATGGCGC
AGGCCCTCCCGTACACGGACTACGTGTTTGGGAATGAGTCCGAGGCCTTA
GCCTATGGCGAGCTTAAGAAGTGGGGGACGGACATCCCTACCATTGCGCT
TCGCCTGGCGGCAGAGCCCAAGAAGAGTGGCACGCGCGCACGGATCGTGG
TGTTTACGCAGGGAGGGGACGAGACCATCGTGGCAAAGGAAGGCACGGTG
GAAAAATACCCAGTGGAGACGCTGGAAAAGGAAAAATTGGTGGATACGAA
TGGGGCGGGGGATGCCTTCGTCGGCGGATTTTTGTCGGTGTTGATGAAGG
GGGGCGACATCAAGGAGAGTGTCCGTGCGGGGCATTGGGCAAGTCGCGTG
ATTATTCAGAGGAGTGGGTGTACCTTCCCGAAGGAGTGTGAGTTTAAATA
GAGAGAGGAGGGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|625856 >mRNA_7039-protein ID=mRNA_7039-protein|Name=jgi.p|Nanoce1779_2|625856|organism=Nannochloropsis oceanica|type=polypeptide|length=339bp
MPGTLLGMGNPLLDISAEVSQEVLDKYELKLDSAILAEDKHLPLYKELVD
SYKVQYIAGGATQNAIRVAQWMLQTPKSTSFFGCIGKDTFGAQLQKCAED
DGVNAYYKEDTEAATGTCAVLVKDGERSLCANLSAANKFTADHLASVKAK
EMIAEAKMFYVASFFLTVSVESLLEVATHAVEHNKIFAMNLSAPFLIQFF
SEQMAQALPYTDYVFGNESEALAYGELKKWGTDIPTIALRLAAEPKKSGT
RARIVVFTQGGDETIVAKEGTVEKYPVETLEKEKLVDTNGAGDAFVGGFL
SVLMKGGDIKESVRAGHWASRVIIQRSGCTFPKECEFK* back to topmRNA from alignment at scaffold_16:133104..135305- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7039 ID=mRNA_7039|Name=jgi.p|Nanoce1779_2|625856|organism=Nannochloropsis oceanica|type=mRNA|length=2202bp|location=Sequence derived from alignment at scaffold_16:133104..135305- (Nannochloropsis oceanica)
AGGAATCTCCATCCCCACCACCGCCACTTCTACAATGCCGGGCACTCTTT
TGGGCATGGGAAACCCCCTCCTCGACATCTCCGCGGAAGTGTCCCAGGAA
GTTTTGGACAAGTACGAGCTCAAGGTATAGAAGGGGTCGAGGGACCAAGG
GACAAAGGGAGGGAGGGATCGAATACGGCAGGGAGGAGGGTATGTGCGAC
TGCATAACAGAAACTGACTCTCATGCATCCATTCATCTGCCATCAGCTGG
ACTCTGCAATTCTTGCAGAGGATAAGCACCTGCCCCTGTACAAGGAGCTG
GTGGACTCCTACAAGGTCCAATATATTGCGGGCGGGGCCACCCAGAACGC
CATCCGTGTCGCTCAGTGGATGTTGCAGACTCCTAAGGTGAGTGAGAGAG
GGAAACGAATGGGGAAGGATGAATAGGAAATAGGGCGTTTTAGCTCTGAT
CCTTACATTTATTCTCCTCTTCGTCCTCCTCCTCTTCCTCCTTAACACGA
CTCACCCCTCTGTTCTTCCATCCCTCCCTCCCTTCCTCCCTTCCCTCCCC
CTCATCTAAGTCTACCAGCTTCTTCGGCTGCATCGGCAAAGACACTTTCG
GTGCCCAGCTGCAAAAGTGTGCGGAGGATGACGGGGTCAACGCCTACTAC
AAAGAGGACACCGAGGCAGCCACGGGAACGTGTGCCGTGCTGGTGAAGGA
TGGAGAAAGGTCGTTGTGCGCCAATTTAAGTGCTGCCAACAAATTCACTG
CAGACCACCTGGCGTCAGTCAAGGCAAAGGAAATGATCGCAGAGGCCAAA
ATGTTTTACGTGGCTTCCTTTTTTTTGACGGTGTCGGTGGAGTCTCTGTT
GGAGGTGGCGACCCATGCGGTAGAGCACAACAAGGTAAAGTTCGAGTGTG
GAACATAACGTGTGGATATTTTCTTAAGTAATAAGGGGAAAGGTAATGTG
GTTAATCGTACTTTGTGGTGTTTGGTATCAAGAGAGTTCTGGGCGATAAA
TGCTGTGTGGGTGAGTGGTACTTGGTGTGCGGTGTTTTCGGGGAATGTCC
TCATGTAGAGAATGATTCAGACATAGAGACACAGACACACACGCACATAT
CCTCATATCGACACACACCCACCTAGACAACGCATGTACCCTTGACCCCT
ATTTCTCCCCCTCGCTTTCATCTCATTTTTTCTCATCCCCCTCTCCTGCA
ACACAGGTCGCTGCTCTCTTCCACTTACGTTCCCTTCATCATAATCAAAG
TCCCCTCCCTTATCTACATCAAATTCCTCTCGCTTGTTTAATTCCCCTCC
ATAATATAAATCTTATGCCCCTCCCTTATCTAAATCTAATCCCCCTCCTC
AATCTAATTATAATCCCCCTCCTCAATCTAAATATAATCCCCCTCCTCAA
TCTAATTATAATCCCCCTCCTTAATCTAATTATAATCCCCCTCCTCAATC
TAAATATAATCCCCCTCCTTAATCTAATTATAATCCCCCTCCTCAATCTA
ATCATAATCCCCCTCCTTAATCTAAATCTAATCCCCCTCCTCAATCTAAT
TATAATCCCCCTCCTCAATCTAATTATAATCCCCCTCCTCAATCTAAATC
TAATCCCCCTCCTCAATCTAATTATAAACCCCCTCCTCAATCTAATTATA
ATCCCCCTCCTCAATCTAATTATAAACCCCCTCCTCAATCTAAATCTAAT
TTCCCTCCCTCTCTCGTCCTCCGCAGATCTTCGCCATGAACCTCTCCGCG
CCCTTTCTCATCCAATTTTTTTCCGAGCAAATGGCGCAGGCCCTCCCGTA
CACGGACTACGTGTTTGGGAATGAGTCCGAGGCCTTAGCCTATGGCGAGC
TTAAGAAGTGGGGGACGGACATCCCTACCATTGCGCTTCGCCTGGCGGCA
GAGCCCAAGAAGAGTGGCACGCGCGCACGGATCGTGGTGTTTACGCAGGG
AGGGGACGAGACCATCGTGGCAAAGGAAGGCACGGTGGAAAAATACCCAG
TGGAGACGCTGGAAAAGGAAAAATTGGTGGATACGAATGGGGCGGGGGAT
GCCTTCGTCGGCGGATTTTTGTCGGTGTTGATGAAGGGGGGCGACATCAA
GGAGAGTGTCCGTGCGGGGCATTGGGCAAGTCGCGTGATTATTCAGAGGA
GTGGGTGTACCTTCCCGAAGGAGTGTGAGTTTAAATAGAGAGAGGAGGGG
GG back to topCoding sequence (CDS) from alignment at scaffold_16:133104..135305- >mRNA_7039 ID=mRNA_7039|Name=jgi.p|Nanoce1779_2|625856|organism=Nannochloropsis oceanica|type=CDS|length=4068bp|location=Sequence derived from alignment at scaffold_16:133104..135305- (Nannochloropsis oceanica)
ATCTTCGCCATGAACCTCTCCGCGCCCTTTCTCATCCAATTTTTTTCCGA
GCAAATGGCGCAGGCCCTCCCGTACACGGACTACGTGTTTGGGAATGAGT
CCGAGGCCTTAGCCTATGGCGAGCTTAAGAAGTGGGGGACGGACATCCCT
ACCATTGCGCTTCGCCTGGCGGCAGAGCCCAAGAAGAGTGGCACGCGCGC
ACGGATCGTGGTGTTTACGCAGGGAGGGGACGAGACCATCGTGGCAAAGG
AAGGCACGGTGGAAAAATACCCAGTGGAGACGCTGGAAAAGGAAAAATTG
GTGGATACGAATGGGGCGGGGGATGCCTTCGTCGGCGGATTTTTGTCGGT
GTTGATGAAGGGGGGCGACATCAAGGAGAGTGTCCGTGCGGGGCATTGGG
CAAGTCGCGTGATTATTCAGAGGAGTGGGTGTACCTTCCCGAAGGAGTGT
GAGTTTAAATAGTCTACCAGCTTCTTCGGCTGCATCGGCAAAGACACTTT
CGGTGCCCAGCTGCAAAAGTGTGCGGAGGATGACGGGGTCAACGCCTACT
ACAAAGAGGACACCGAGGCAGCCACGGGAACGTGTGCCGTGCTGGTGAAG
GATGGAGAAAGGTCGTTGTGCGCCAATTTAAGTGCTGCCAACAAATTCAC
TGCAGACCACCTGGCGTCAGTCAAGGCAAAGGAAATGATCGCAGAGGCCA
AAATGTTTTACGTGGCTTCCTTTTTTTTGACGGTGTCGGTGGAGTCTCTG
TTGGAGGTGGCGACCCATGCGGTAGAGCACAACAAGCTGGACTCTGCAAT
TCTTGCAGAGGATAAGCACCTGCCCCTGTACAAGGAGCTGGTGGACTCCT
ACAAGGTCCAATATATTGCGGGCGGGGCCACCCAGAACGCCATCCGTGTC
GCTCAGTGGATGTTGCAGACTCCTAAGATGCCGGGCACTCTTTTGGGCAT
GGGAAACCCCCTCCTCGACATCTCCGCGGAAGTGTCCCAGGAAGTTTTGG
ACAAGTACGAGCTCAAGATCTTCGCCATGAACCTCTCCGCGCCCTTTCTC
ATCCAATTTTTTTCCGAGCAAATGGCGCAGGCCCTCCCGTACACGGACTA
CGTGTTTGGGAATGAGTCCGAGGCCTTAGCCTATGGCGAGCTTAAGAAGT
GGGGGACGGACATCCCTACCATTGCGCTTCGCCTGGCGGCAGAGCCCAAG
AAGAGTGGCACGCGCGCACGGATCGTGGTGTTTACGCAGGGAGGGGACGA
GACCATCGTGGCAAAGGAAGGCACGGTGGAAAAATACCCAGTGGAGACGC
TGGAAAAGGAAAAATTGGTGGATACGAATGGGGCGGGGGATGCCTTCGTC
GGCGGATTTTTGTCGGTGTTGATGAAGGGGGGCGACATCAAGGAGAGTGT
CCGTGCGGGGCATTGGGCAAGTCGCGTGATTATTCAGAGGAGTGGGTGTA
CCTTCCCGAAGGAGTGTGAGTTTAAATAGTCTACCAGCTTCTTCGGCTGC
ATCGGCAAAGACACTTTCGGTGCCCAGCTGCAAAAGTGTGCGGAGGATGA
CGGGGTCAACGCCTACTACAAAGAGGACACCGAGGCAGCCACGGGAACGT
GTGCCGTGCTGGTGAAGGATGGAGAAAGGTCGTTGTGCGCCAATTTAAGT
GCTGCCAACAAATTCACTGCAGACCACCTGGCGTCAGTCAAGGCAAAGGA
AATGATCGCAGAGGCCAAAATGTTTTACGTGGCTTCCTTTTTTTTGACGG
TGTCGGTGGAGTCTCTGTTGGAGGTGGCGACCCATGCGGTAGAGCACAAC
AAGCTGGACTCTGCAATTCTTGCAGAGGATAAGCACCTGCCCCTGTACAA
GGAGCTGGTGGACTCCTACAAGGTCCAATATATTGCGGGCGGGGCCACCC
AGAACGCCATCCGTGTCGCTCAGTGGATGTTGCAGACTCCTAAGATGCCG
GGCACTCTTTTGGGCATGGGAAACCCCCTCCTCGACATCTCCGCGGAAGT
GTCCCAGGAAGTTTTGGACAAGTACGAGCTCAAGATCTTCGCCATGAACC
TCTCCGCGCCCTTTCTCATCCAATTTTTTTCCGAGCAAATGGCGCAGGCC
CTCCCGTACACGGACTACGTGTTTGGGAATGAGTCCGAGGCCTTAGCCTA
TGGCGAGCTTAAGAAGTGGGGGACGGACATCCCTACCATTGCGCTTCGCC
TGGCGGCAGAGCCCAAGAAGAGTGGCACGCGCGCACGGATCGTGGTGTTT
ACGCAGGGAGGGGACGAGACCATCGTGGCAAAGGAAGGCACGGTGGAAAA
ATACCCAGTGGAGACGCTGGAAAAGGAAAAATTGGTGGATACGAATGGGG
CGGGGGATGCCTTCGTCGGCGGATTTTTGTCGGTGTTGATGAAGGGGGGC
GACATCAAGGAGAGTGTCCGTGCGGGGCATTGGGCAAGTCGCGTGATTAT
TCAGAGGAGTGGGTGTACCTTCCCGAAGGAGTGTGAGTTTAAATAGTCTA
CCAGCTTCTTCGGCTGCATCGGCAAAGACACTTTCGGTGCCCAGCTGCAA
AAGTGTGCGGAGGATGACGGGGTCAACGCCTACTACAAAGAGGACACCGA
GGCAGCCACGGGAACGTGTGCCGTGCTGGTGAAGGATGGAGAAAGGTCGT
TGTGCGCCAATTTAAGTGCTGCCAACAAATTCACTGCAGACCACCTGGCG
TCAGTCAAGGCAAAGGAAATGATCGCAGAGGCCAAAATGTTTTACGTGGC
TTCCTTTTTTTTGACGGTGTCGGTGGAGTCTCTGTTGGAGGTGGCGACCC
ATGCGGTAGAGCACAACAAGCTGGACTCTGCAATTCTTGCAGAGGATAAG
CACCTGCCCCTGTACAAGGAGCTGGTGGACTCCTACAAGGTCCAATATAT
TGCGGGCGGGGCCACCCAGAACGCCATCCGTGTCGCTCAGTGGATGTTGC
AGACTCCTAAGATGCCGGGCACTCTTTTGGGCATGGGAAACCCCCTCCTC
GACATCTCCGCGGAAGTGTCCCAGGAAGTTTTGGACAAGTACGAGCTCAA
GATCTTCGCCATGAACCTCTCCGCGCCCTTTCTCATCCAATTTTTTTCCG
AGCAAATGGCGCAGGCCCTCCCGTACACGGACTACGTGTTTGGGAATGAG
TCCGAGGCCTTAGCCTATGGCGAGCTTAAGAAGTGGGGGACGGACATCCC
TACCATTGCGCTTCGCCTGGCGGCAGAGCCCAAGAAGAGTGGCACGCGCG
CACGGATCGTGGTGTTTACGCAGGGAGGGGACGAGACCATCGTGGCAAAG
GAAGGCACGGTGGAAAAATACCCAGTGGAGACGCTGGAAAAGGAAAAATT
GGTGGATACGAATGGGGCGGGGGATGCCTTCGTCGGCGGATTTTTGTCGG
TGTTGATGAAGGGGGGCGACATCAAGGAGAGTGTCCGTGCGGGGCATTGG
GCAAGTCGCGTGATTATTCAGAGGAGTGGGTGTACCTTCCCGAAGGAGTG
TGAGTTTAAATAGTCTACCAGCTTCTTCGGCTGCATCGGCAAAGACACTT
TCGGTGCCCAGCTGCAAAAGTGTGCGGAGGATGACGGGGTCAACGCCTAC
TACAAAGAGGACACCGAGGCAGCCACGGGAACGTGTGCCGTGCTGGTGAA
GGATGGAGAAAGGTCGTTGTGCGCCAATTTAAGTGCTGCCAACAAATTCA
CTGCAGACCACCTGGCGTCAGTCAAGGCAAAGGAAATGATCGCAGAGGCC
AAAATGTTTTACGTGGCTTCCTTTTTTTTGACGGTGTCGGTGGAGTCTCT
GTTGGAGGTGGCGACCCATGCGGTAGAGCACAACAAGCTGGACTCTGCAA
TTCTTGCAGAGGATAAGCACCTGCCCCTGTACAAGGAGCTGGTGGACTCC
TACAAGGTCCAATATATTGCGGGCGGGGCCACCCAGAACGCCATCCGTGT
CGCTCAGTGGATGTTGCAGACTCCTAAGATGCCGGGCACTCTTTTGGGCA
TGGGAAACCCCCTCCTCGACATCTCCGCGGAAGTGTCCCAGGAAGTTTTG
GACAAGTACGAGCTCAAG back to top
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