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Properties
| Property Name | Value |
|---|
| TranscriptId | 631676 |
| Track | FilteredModels2 |
| ProteinId | 631590 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:65283..67203 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7017 ID=mRNA_7017|Name=jgi.p|Nanoce1779_2|631590|organism=Nannochloropsis oceanica|type=mRNA|length=1013bp
ACAGGCGTTAGCTTTGCTGTCCGACCACCACACGAACGAGCCACCACACG
TGAGCCGCGGCCTTTCCTGTCCTTAAGTCGCCTCCTCGCCACCACGCGTA
TCACATCAACCCACGGAGAGGAGCGAGGCACTGCTTAACTGTGTCTCTGC
CCGTACTTAAGTGCGGTTTAGAGGAGCTATCATAGACCCTTCTGGCACTT
CGCCCCTCCTTCCTCCCCTTCCACCGGCACCGACGGGAGGAGGAGGAGGA
GAAGGAGGAGGAGGAGCAAGATCACGAAGAACCCGTTCTGTTCCAACCAC
TGGAGGCGGGGGAGGGGCAGGCGGCATGCCAATAATAGAACTTAGGCAAC
GTTCAAGGGGCTATGTTGAGCTTGGGCACGATGACGGGATGGGGATGGGG
GAAGAAGACGACTCCTTCTACCATGGAGCGGCCGCGGGGGACAACGTCGG
AAGGGGCCTGGGCTTGAGCGATGCGCCCCTGGGGGGTGGCGGCATCAGCA
GTAGCCAATATAACGATGGGAGCGACGACGATTTCTCTACTAGCGGTCCT
CAAGGTCCTGTTGGAAAATGGGCTCGTTTCCGCAAGACCAGCAGAGAACG
GCTGCTGCGTGGGTTCTCCCCTCTGCGTCGATCCATCAGCACGACTGCCC
ACCATCCCTCTGCTCCCCGAGTCTATCAGTTCGTCTTCTTCTACTCTCTC
TGGGCAGTGTGTTTTCTCTCCCCTGTGGCCCATATGCTCCTCAACGAGTC
GCCCTACATCCACGTGAAGAAGGGGGAGCTCGATAAGCGGGCCATGGGTT
GGGTAGTGGTCGAGGCTGTCATCTTGTTCGCCTGCTTGCTCCTTTTCTCA
GGCTACCTCTGGTACAGACACGCCCGTAGAAAAGCAATGCTTGGGAGTCT
CACCTACTCCCGACTGGGTGACGGCAGAGGACTGCTGGACTTTGGAGGGG
GAGGGAGGGAGGGAGGGAGGGGTATTTTCCGTCGATCCTCCTACCACGAC
GACCCCTTTTTGA back to topprotein sequence of jgi.p|Nanoce1779_2|631590 >mRNA_7017-protein ID=mRNA_7017-protein|Name=jgi.p|Nanoce1779_2|631590|organism=Nannochloropsis oceanica|type=polypeptide|length=229bp
MPIIELRQRSRGYVELGHDDGMGMGEEDDSFYHGAAAGDNVGRGLGLSDA
PLGGGGISSSQYNDGSDDDFSTSGPQGPVGKWARFRKTSRERLLRGFSPL
RRSISTTAHHPSAPRVYQFVFFYSLWAVCFLSPVAHMLLNESPYIHVKKG
ELDKRAMGWVVVEAVILFACLLLFSGYLWYRHARRKAMLGSLTYSRLGDG
RGLLDFGGGGREGGRGIFRRSSYHDDPFL back to topmRNA from alignment at scaffold_16:65283..67203- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7017 ID=mRNA_7017|Name=jgi.p|Nanoce1779_2|631590|organism=Nannochloropsis oceanica|type=mRNA|length=1921bp|location=Sequence derived from alignment at scaffold_16:65283..67203- (Nannochloropsis oceanica)
ACAGGCGTTAGCTTTGCTGTCCGACCACCACACGAACGAGCCACCACACG
TGAGGTAAGGTCGTATGGAAATAGAAAAGAGGGAGTCCCGGCAGGCATGT
ACCATATCTATATGTCCTCGGCAAAACACGCACAGCCGCGGCCTTTCCTG
TCCTTAAGTCGCCTCCTCGCCACCACGCGTATCACATCAACCCACGGAGA
GGAGCGAGGCACTGCTTAACTGTGTCTCTGCCCGTACTTAAGTGCGGTTT
AGAGGAGCTATCATAGACCCTTCTGGCACTTCGCCCCTCCTTCCTCCCCT
TCCACCGGCACCGACGGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGCAA
GATCACGAAGAACCCGTTCTGTTCCAACCACTGGAGGCGGGGGAGGGGCA
GGCGGCATGCCAATAATAGAACTTAGGCAACGTTCAAGGTAGGGTCGAAA
GGGAAAGTGAAGTGAGGGAGGGAGGGCGGGCGGGAGGATAAAAGATGCGT
AGACGCGGACTGTTCGATGACTGATGTCGCTTCCTCCTGTTCACTTCCTC
CTTCCCCCCCCCCCCTTCCTCTTGCAGGGGCTATGTTGAGCTTGGGCACG
ATGACGGGATGGGGATGGGGGAAGAAGACGACTCCTTCTACCATGGAGCG
GCCGCGGGGGACAACGTCGGAAGGGGCCTGGGCTTGAGCGATGGTACACA
CGCGCCCATCTCTTGCTTTTCTTTTCCCCCCCCTACCCTCCCTCCCATCC
CTCCCTTCTCTGTGGTATCATTCATTCTCTCTACCACAGTCAGATGGTCT
CACTCCTTCCCTTCCTCCCTCCTTCTCTCCCTCCCTCCCGCTCACAGCGC
CCCTGGGGGGTGGCGGCATCAGCAGTAGCCAATATAACGATGGGAGCGAC
GACGATTTCTCTACTAGCGGTCCTCAAGGTCCTGTTGGAAAATGGGCTCG
TTTCCGCAAGACCAGCAGAGAACGGTATGTCACCCCCCGATCTCCCTCTT
TCCCTCACTCCCTCTTTCCCTCCCTCCTCGGAGCTAATGCGATTTCTCTC
CCCCGGTCCCTTCCTCCGTCTTTTCCTTTCTTCCTCTCCTTTCTTTCCAG
GCTGCTGCGTGGGTTCTCCCCTCTGCGTCGATCCATCAGCACGACTGCCC
ACCATCCCTCTGCTCCCCGAGTCTATCAGTTCGTCTTCTTCTACTCTCTC
TGGGCAGTGTGTTTTCTCTCCCCTGTGGCCCATATGCTCCTCAACGAGTC
GCCCTACATCCACGTGAAGAAGGGGGAGCTCGATAAGCGGGCCATGGGTT
GGGTAGTGGTCGAGGTAGGGAGGGAGCGAGGGAGGGAGGGAGGAAGGAAG
AGGGGATCAGGCCCAACTCCTCCTTTTTCCGCCATCCTTTTTTTCTTACT
TCTCAGTCTATCCTCTCGCCCTCCTTTCCTCCTCTCCTCCCTCCTCCCCT
CCTTACCTCTCTAGGCTGTCATCTTGTTCGCCTGCTTGCTCCTTTTCTCA
GGCTACCTCTGGTACAGACACGCCCGTAGAAAAGCAATGGTAAGCCTCCT
TTCCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTCCTCCCTCCCCC
TGTCCCTCCCTTAATCCCGATCATTTCTGCTGTTTATAGCCACCTCCCAC
CTTGCTGCCTTCCAAACCCTCCCTCCTCCTCCCTCCCTCCCTCCCTCCCT
CCCTCTCTTTCGCTCCACAAACAAAGCGTCTCCTCCTCTAACGCTTCCCA
CATCCATCCCTCCCTCCCTCCTTCCCTTTCTTCCTCCCTTCCTGCAGCTT
GGGAGTCTCACCTACTCCCGACTGGGTGACGGCAGAGGACTGCTGGACTT
TGGAGGGGGAGGGAGGGAGGGAGGGAGGGGTATTTTCCGTCGATCCTCCT
ACCACGACGACCCCTTTTTGA back to topCoding sequence (CDS) from alignment at scaffold_16:65283..67203- >mRNA_7017 ID=mRNA_7017|Name=jgi.p|Nanoce1779_2|631590|organism=Nannochloropsis oceanica|type=CDS|length=4122bp|location=Sequence derived from alignment at scaffold_16:65283..67203- (Nannochloropsis oceanica)
CTTGGGAGTCTCACCTACTCCCGACTGGGTGACGGCAGAGGACTGCTGGA
CTTTGGAGGGGGAGGGAGGGAGGGAGGGAGGGGTATTTTCCGTCGATCCT
CCTACCACGACGACCCCTTTTTGGCTGTCATCTTGTTCGCCTGCTTGCTC
CTTTTCTCAGGCTACCTCTGGTACAGACACGCCCGTAGAAAAGCAATGGC
TGCTGCGTGGGTTCTCCCCTCTGCGTCGATCCATCAGCACGACTGCCCAC
CATCCCTCTGCTCCCCGAGTCTATCAGTTCGTCTTCTTCTACTCTCTCTG
GGCAGTGTGTTTTCTCTCCCCTGTGGCCCATATGCTCCTCAACGAGTCGC
CCTACATCCACGTGAAGAAGGGGGAGCTCGATAAGCGGGCCATGGGTTGG
GTAGTGGTCGAGCGCCCCTGGGGGGTGGCGGCATCAGCAGTAGCCAATAT
AACGATGGGAGCGACGACGATTTCTCTACTAGCGGTCCTCAAGGTCCTGT
TGGAAAATGGGCTCGTTTCCGCAAGACCAGCAGAGAACGGGGCTATGTTG
AGCTTGGGCACGATGACGGGATGGGGATGGGGGAAGAAGACGACTCCTTC
TACCATGGAGCGGCCGCGGGGGACAACGTCGGAAGGGGCCTGGGCTTGAG
CGATGATGCCAATAATAGAACTTAGGCAACGTTCAAGCTTGGGAGTCTCA
CCTACTCCCGACTGGGTGACGGCAGAGGACTGCTGGACTTTGGAGGGGGA
GGGAGGGAGGGAGGGAGGGGTATTTTCCGTCGATCCTCCTACCACGACGA
CCCCTTTTTGGCTGTCATCTTGTTCGCCTGCTTGCTCCTTTTCTCAGGCT
ACCTCTGGTACAGACACGCCCGTAGAAAAGCAATGGCTGCTGCGTGGGTT
CTCCCCTCTGCGTCGATCCATCAGCACGACTGCCCACCATCCCTCTGCTC
CCCGAGTCTATCAGTTCGTCTTCTTCTACTCTCTCTGGGCAGTGTGTTTT
CTCTCCCCTGTGGCCCATATGCTCCTCAACGAGTCGCCCTACATCCACGT
GAAGAAGGGGGAGCTCGATAAGCGGGCCATGGGTTGGGTAGTGGTCGAGC
GCCCCTGGGGGGTGGCGGCATCAGCAGTAGCCAATATAACGATGGGAGCG
ACGACGATTTCTCTACTAGCGGTCCTCAAGGTCCTGTTGGAAAATGGGCT
CGTTTCCGCAAGACCAGCAGAGAACGGGGCTATGTTGAGCTTGGGCACGA
TGACGGGATGGGGATGGGGGAAGAAGACGACTCCTTCTACCATGGAGCGG
CCGCGGGGGACAACGTCGGAAGGGGCCTGGGCTTGAGCGATGATGCCAAT
AATAGAACTTAGGCAACGTTCAAGCTTGGGAGTCTCACCTACTCCCGACT
GGGTGACGGCAGAGGACTGCTGGACTTTGGAGGGGGAGGGAGGGAGGGAG
GGAGGGGTATTTTCCGTCGATCCTCCTACCACGACGACCCCTTTTTGGCT
GTCATCTTGTTCGCCTGCTTGCTCCTTTTCTCAGGCTACCTCTGGTACAG
ACACGCCCGTAGAAAAGCAATGGCTGCTGCGTGGGTTCTCCCCTCTGCGT
CGATCCATCAGCACGACTGCCCACCATCCCTCTGCTCCCCGAGTCTATCA
GTTCGTCTTCTTCTACTCTCTCTGGGCAGTGTGTTTTCTCTCCCCTGTGG
CCCATATGCTCCTCAACGAGTCGCCCTACATCCACGTGAAGAAGGGGGAG
CTCGATAAGCGGGCCATGGGTTGGGTAGTGGTCGAGCGCCCCTGGGGGGT
GGCGGCATCAGCAGTAGCCAATATAACGATGGGAGCGACGACGATTTCTC
TACTAGCGGTCCTCAAGGTCCTGTTGGAAAATGGGCTCGTTTCCGCAAGA
CCAGCAGAGAACGGGGCTATGTTGAGCTTGGGCACGATGACGGGATGGGG
ATGGGGGAAGAAGACGACTCCTTCTACCATGGAGCGGCCGCGGGGGACAA
CGTCGGAAGGGGCCTGGGCTTGAGCGATGATGCCAATAATAGAACTTAGG
CAACGTTCAAGCTTGGGAGTCTCACCTACTCCCGACTGGGTGACGGCAGA
GGACTGCTGGACTTTGGAGGGGGAGGGAGGGAGGGAGGGAGGGGTATTTT
CCGTCGATCCTCCTACCACGACGACCCCTTTTTGGCTGTCATCTTGTTCG
CCTGCTTGCTCCTTTTCTCAGGCTACCTCTGGTACAGACACGCCCGTAGA
AAAGCAATGGCTGCTGCGTGGGTTCTCCCCTCTGCGTCGATCCATCAGCA
CGACTGCCCACCATCCCTCTGCTCCCCGAGTCTATCAGTTCGTCTTCTTC
TACTCTCTCTGGGCAGTGTGTTTTCTCTCCCCTGTGGCCCATATGCTCCT
CAACGAGTCGCCCTACATCCACGTGAAGAAGGGGGAGCTCGATAAGCGGG
CCATGGGTTGGGTAGTGGTCGAGCGCCCCTGGGGGGTGGCGGCATCAGCA
GTAGCCAATATAACGATGGGAGCGACGACGATTTCTCTACTAGCGGTCCT
CAAGGTCCTGTTGGAAAATGGGCTCGTTTCCGCAAGACCAGCAGAGAACG
GGGCTATGTTGAGCTTGGGCACGATGACGGGATGGGGATGGGGGAAGAAG
ACGACTCCTTCTACCATGGAGCGGCCGCGGGGGACAACGTCGGAAGGGGC
CTGGGCTTGAGCGATGATGCCAATAATAGAACTTAGGCAACGTTCAAGCT
TGGGAGTCTCACCTACTCCCGACTGGGTGACGGCAGAGGACTGCTGGACT
TTGGAGGGGGAGGGAGGGAGGGAGGGAGGGGTATTTTCCGTCGATCCTCC
TACCACGACGACCCCTTTTTGGCTGTCATCTTGTTCGCCTGCTTGCTCCT
TTTCTCAGGCTACCTCTGGTACAGACACGCCCGTAGAAAAGCAATGGCTG
CTGCGTGGGTTCTCCCCTCTGCGTCGATCCATCAGCACGACTGCCCACCA
TCCCTCTGCTCCCCGAGTCTATCAGTTCGTCTTCTTCTACTCTCTCTGGG
CAGTGTGTTTTCTCTCCCCTGTGGCCCATATGCTCCTCAACGAGTCGCCC
TACATCCACGTGAAGAAGGGGGAGCTCGATAAGCGGGCCATGGGTTGGGT
AGTGGTCGAGCGCCCCTGGGGGGTGGCGGCATCAGCAGTAGCCAATATAA
CGATGGGAGCGACGACGATTTCTCTACTAGCGGTCCTCAAGGTCCTGTTG
GAAAATGGGCTCGTTTCCGCAAGACCAGCAGAGAACGGGGCTATGTTGAG
CTTGGGCACGATGACGGGATGGGGATGGGGGAAGAAGACGACTCCTTCTA
CCATGGAGCGGCCGCGGGGGACAACGTCGGAAGGGGCCTGGGCTTGAGCG
ATGATGCCAATAATAGAACTTAGGCAACGTTCAAGCTTGGGAGTCTCACC
TACTCCCGACTGGGTGACGGCAGAGGACTGCTGGACTTTGGAGGGGGAGG
GAGGGAGGGAGGGAGGGGTATTTTCCGTCGATCCTCCTACCACGACGACC
CCTTTTTGGCTGTCATCTTGTTCGCCTGCTTGCTCCTTTTCTCAGGCTAC
CTCTGGTACAGACACGCCCGTAGAAAAGCAATGGCTGCTGCGTGGGTTCT
CCCCTCTGCGTCGATCCATCAGCACGACTGCCCACCATCCCTCTGCTCCC
CGAGTCTATCAGTTCGTCTTCTTCTACTCTCTCTGGGCAGTGTGTTTTCT
CTCCCCTGTGGCCCATATGCTCCTCAACGAGTCGCCCTACATCCACGTGA
AGAAGGGGGAGCTCGATAAGCGGGCCATGGGTTGGGTAGTGGTCGAGCGC
CCCTGGGGGGTGGCGGCATCAGCAGTAGCCAATATAACGATGGGAGCGAC
GACGATTTCTCTACTAGCGGTCCTCAAGGTCCTGTTGGAAAATGGGCTCG
TTTCCGCAAGACCAGCAGAGAACGGGGCTATGTTGAGCTTGGGCACGATG
ACGGGATGGGGATGGGGGAAGAAGACGACTCCTTCTACCATGGAGCGGCC
GCGGGGGACAACGTCGGAAGGGGCCTGGGCTTGAGCGATGATGCCAATAA
TAGAACTTAGGCAACGTTCAAG back to top
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