Properties
| Property Name | Value |
|---|
| TranscriptId | 595322 |
| Track | FilteredModels2 |
| ProteinId | 595236 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_16 | supercontig | scaffold_16:15924..17453 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7002 ID=mRNA_7002|Name=jgi.p|Nanoce1779_2|595236|organism=Nannochloropsis oceanica|type=mRNA|length=1530bp
TCCTGTATGTCACGTGTATTCCACGCGCGTATTTCTAAATCGCGGATCTC
ATTCCGCACCCGCTGCCTGAAGGCTTCTACCACCTCCTCCTTTGTTGTCC
CTACCTCTTCCTCTTCGTCCTGCTCATTCGCATCCTCCCCTGGTTTCGAC
ACACGGACATGCTGTACAGAACCAACATTCTTTTGCTCTTTCTCCAATCG
CATTGATTCCTCCAGAGCCGTCAGGGCCGCTGAGATATCTTCCTTCGACT
TGGTGCACTCCCGAGTCAGCTTGTCGAGCACCTCGGCCCCCTTGGTCGGT
GCCATTGCCCTGTCCAGCAACGCACGCTCCTCTGCTCGGGCCTTGGCGAC
AACTTCTGTTTGGGGGCTCTGATGTGGGACCAGGATACGATCTCCGTCCG
CTTCTGTGTGTCGTTCGAGGAGGAAGGGATCGACGCGCATGTAAATTTTG
GCGTCCTCCATCATCTTCTCGAGCTCCTTGCGCAGGTCTTGCATTTCCTG
AATCGCCTCCTCCCATGCATGAAGCTCCCGTTGAAGTTCAACTGTCACGA
GCGCTGACTCTTCAGTAACTAATGCGAAGATGGCTTCCGCTTCTTGCTGC
TCGCGAGCAGCACGGTGCTTGCCTTCGCTCTTCTTGCCCCTTTTTGCATC
GCCCTTCGACTTGGGGAGGAAAGAGAGAGAGGCGTGCTCCCGATCCTCTC
CTTCCCCACGCTGTTGCATCCCTTCGACGACATTGTCGGTGAGTTCCGCC
GTGCGAGAGCGAAGGTGGTGGTGCTGCTGTTGCTGTTGTTTCGATGGCTC
CTCGGACACATCCGACTCCAACTGCTGCTGCTGCTGCTGCTGCTGCTGTT
CTTCAAACGTCGCCTTTACGGCATCAAGCTCCATGGTGATCTGCCGGACC
TGTTCTAACTCTTGTTCAACCTCCTCCTTGGTTTCCATTAACTCCTTGAA
CGCCTTTCCTCTCGTGCTCTCCCAAATTTCATCCTCCTTTTCCTTACCCT
TCCTTGCCCACATGTCAATCTGCTCCTCGATGAACAGGCGGACTCTCTCC
CGGATCTCCGCCAGCACGATCTCGCGCACCTCCTTCCAATCCTTCGTCGA
CCCTGCGGTCTCAACCTCCTTCTCCCTCACCTCCCGCAAGACCATCCCTA
TCCCCTCGGCCACTTTTTCCATCTCCTGAATCTTGTCCATGATTTGTACT
TTTCGTGCATGGAGCTGCTCGCGACTTGCTATGCTGGTAATGTCAGCATA
CACTGTACTATCACTGCTGCTGCTGCTGCTGCTCGCAGCCTCGGAGCTAG
TCATAATGGGGGTCATTGAGGCAGATACTCCCTCCAACCCTCCTTGTGTC
CCTCCCGCTTCATTGTTGCTGGGGGTGGCAATATGGCCTGGGAAAGCTGC
CGAGGCAGGCGTTCCTTCCAGCCCTCCCTTCGTCTCTCTCTCCTCGGCAG
TGGCCATGATCGGGGTCGCAGAGGCAGGTAGCTTTCCGGTCCTCCCTCCC
TCCCTCCCTCCCTCTTCCTCCCTCATCACC back to topprotein sequence of jgi.p|Nanoce1779_2|595236 >mRNA_7002-protein ID=mRNA_7002-protein|Name=jgi.p|Nanoce1779_2|595236|organism=Nannochloropsis oceanica|type=polypeptide|length=200bp
MASASCCSRAARCLPSLFLPLFASPFDLGRKEREACSRSSPSPRCCIPST
TLSVSSAVRERRWWCCCCCCFDGSSDTSDSNCCCCCCCCCSSNVAFTASS
SMVICRTCSNSCSTSSLVSINSLNAFPLVLSQISSSFSLPFLAHMSICSS
MNRRTLSRISASTISRTSFQSFVDPAVSTSFSLTSRKTIPIPSATFSIS* back to topmRNA from alignment at scaffold_16:15924..17453- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7002 ID=mRNA_7002|Name=jgi.p|Nanoce1779_2|595236|organism=Nannochloropsis oceanica|type=mRNA|length=1530bp|location=Sequence derived from alignment at scaffold_16:15924..17453- (Nannochloropsis oceanica)
TCCTGTATGTCACGTGTATTCCACGCGCGTATTTCTAAATCGCGGATCTC
ATTCCGCACCCGCTGCCTGAAGGCTTCTACCACCTCCTCCTTTGTTGTCC
CTACCTCTTCCTCTTCGTCCTGCTCATTCGCATCCTCCCCTGGTTTCGAC
ACACGGACATGCTGTACAGAACCAACATTCTTTTGCTCTTTCTCCAATCG
CATTGATTCCTCCAGAGCCGTCAGGGCCGCTGAGATATCTTCCTTCGACT
TGGTGCACTCCCGAGTCAGCTTGTCGAGCACCTCGGCCCCCTTGGTCGGT
GCCATTGCCCTGTCCAGCAACGCACGCTCCTCTGCTCGGGCCTTGGCGAC
AACTTCTGTTTGGGGGCTCTGATGTGGGACCAGGATACGATCTCCGTCCG
CTTCTGTGTGTCGTTCGAGGAGGAAGGGATCGACGCGCATGTAAATTTTG
GCGTCCTCCATCATCTTCTCGAGCTCCTTGCGCAGGTCTTGCATTTCCTG
AATCGCCTCCTCCCATGCATGAAGCTCCCGTTGAAGTTCAACTGTCACGA
GCGCTGACTCTTCAGTAACTAATGCGAAGATGGCTTCCGCTTCTTGCTGC
TCGCGAGCAGCACGGTGCTTGCCTTCGCTCTTCTTGCCCCTTTTTGCATC
GCCCTTCGACTTGGGGAGGAAAGAGAGAGAGGCGTGCTCCCGATCCTCTC
CTTCCCCACGCTGTTGCATCCCTTCGACGACATTGTCGGTGAGTTCCGCC
GTGCGAGAGCGAAGGTGGTGGTGCTGCTGTTGCTGTTGTTTCGATGGCTC
CTCGGACACATCCGACTCCAACTGCTGCTGCTGCTGCTGCTGCTGCTGTT
CTTCAAACGTCGCCTTTACGGCATCAAGCTCCATGGTGATCTGCCGGACC
TGTTCTAACTCTTGTTCAACCTCCTCCTTGGTTTCCATTAACTCCTTGAA
CGCCTTTCCTCTCGTGCTCTCCCAAATTTCATCCTCCTTTTCCTTACCCT
TCCTTGCCCACATGTCAATCTGCTCCTCGATGAACAGGCGGACTCTCTCC
CGGATCTCCGCCAGCACGATCTCGCGCACCTCCTTCCAATCCTTCGTCGA
CCCTGCGGTCTCAACCTCCTTCTCCCTCACCTCCCGCAAGACCATCCCTA
TCCCCTCGGCCACTTTTTCCATCTCCTGAATCTTGTCCATGATTTGTACT
TTTCGTGCATGGAGCTGCTCGCGACTTGCTATGCTGGTAATGTCAGCATA
CACTGTACTATCACTGCTGCTGCTGCTGCTGCTCGCAGCCTCGGAGCTAG
TCATAATGGGGGTCATTGAGGCAGATACTCCCTCCAACCCTCCTTGTGTC
CCTCCCGCTTCATTGTTGCTGGGGGTGGCAATATGGCCTGGGAAAGCTGC
CGAGGCAGGCGTTCCTTCCAGCCCTCCCTTCGTCTCTCTCTCCTCGGCAG
TGGCCATGATCGGGGTCGCAGAGGCAGGTAGCTTTCCGGTCCTCCCTCCC
TCCCTCCCTCCCTCTTCCTCCCTCATCACC back to topCoding sequence (CDS) from alignment at scaffold_16:15924..17453- >mRNA_7002 ID=mRNA_7002|Name=jgi.p|Nanoce1779_2|595236|organism=Nannochloropsis oceanica|type=CDS|length=600bp|location=Sequence derived from alignment at scaffold_16:15924..17453- (Nannochloropsis oceanica)
ATGGCTTCCGCTTCTTGCTGCTCGCGAGCAGCACGGTGCTTGCCTTCGCT
CTTCTTGCCCCTTTTTGCATCGCCCTTCGACTTGGGGAGGAAAGAGAGAG
AGGCGTGCTCCCGATCCTCTCCTTCCCCACGCTGTTGCATCCCTTCGACG
ACATTGTCGGTGAGTTCCGCCGTGCGAGAGCGAAGGTGGTGGTGCTGCTG
TTGCTGTTGTTTCGATGGCTCCTCGGACACATCCGACTCCAACTGCTGCT
GCTGCTGCTGCTGCTGCTGTTCTTCAAACGTCGCCTTTACGGCATCAAGC
TCCATGGTGATCTGCCGGACCTGTTCTAACTCTTGTTCAACCTCCTCCTT
GGTTTCCATTAACTCCTTGAACGCCTTTCCTCTCGTGCTCTCCCAAATTT
CATCCTCCTTTTCCTTACCCTTCCTTGCCCACATGTCAATCTGCTCCTCG
ATGAACAGGCGGACTCTCTCCCGGATCTCCGCCAGCACGATCTCGCGCAC
CTCCTTCCAATCCTTCGTCGACCCTGCGGTCTCAACCTCCTTCTCCCTCA
CCTCCCGCAAGACCATCCCTATCCCCTCGGCCACTTTTTCCATCTCCTGA back to top
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