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Properties
| Property Name | Value |
|---|
| TranscriptId | 597211 |
| Track | FilteredModels2 |
| ProteinId | 597125 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:663136..664847 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6997 ID=mRNA_6997|Name=jgi.p|Nanoce1779_2|597125|organism=Nannochloropsis oceanica|type=mRNA|length=1712bp
TTTATTATTGTGCCTTCATCCTTCTTTTACATGACTGCGTGGAGCTGGGG
GCTGTACGAAGGATGGCTCAAAGACGGCGATAGGTACGTCGGTGGACATC
CACTCAACATACCTGGTTTCTATGTTTCCGTCTCCATCCTCTCTTTGCGA
GTGCTCCACAACTCCTGTGGCCCAGCAGCCCCTGCGACGGCATGGGAAAG
CATCCAAGCGGAAACCAGGAAATGGGGACAAGTATTAAATAATTTAGAGA
TGCAAAACAAAAAGGCTTTGATTGCACAAAAAGTAGTTTTGTTGCGTCCC
CTTGCCTTGTGTTCCAAGGTTTTATCGGCGAAGTTTATAATCGCCGCCCG
AGGAGCATCTATCAAGAGGAGTGGACGACCGAGCAACAAAACACTCAAGT
CCCATGACCATGACCACGACGCATCTTAATTCCAGAAATGTCACTTTTTG
TCAACCCTCCTCATTCGTTAGTCTCACTAGTGTAGCCCTCTTCCAGCTCT
TTCGATGTGTCGCTCGAGCCATTGTTCTTCGTGCGTGGGGGCAGGTCATT
TCAAACCACGTACCACTGTCATGTTCGACGCGTCACCTGCACCACTGCCA
TGGCATTGCTTTTGCTTTCTTAACCGCAGCATTCTGGCTTGTCAAAGTTT
CTCGAAAGGCGCCTGCACAAAGGCACCATTTCATGTCCCAGGTGTCTTCG
AGCCATTGTTCTTGTCCTTTCCGCTCTTCCTCTCCCTGGCCCCCGAGCCA
GCAGGCGAGGGGCGGGCGCGTCGGGCAGCCTCGTCACATGACTTTTTGGG
GTTCACTTTTCCCTCCAATATTTTCTGCCTCGCTTTTGCCTCCCGAAAAA
CCGCTCTTGGTATTCAACCATTACCACGACGTAGCTCACACATCTGACAA
GACGTGCTTGTCTTCTTAAAATCCTCTGGGCGCTCTTTGATGGGACAAGA
GGAGCATGCTAAAAACCAGGAGGTGGCGGGCGAGGAGGCCTATCGCCCTC
GAGCGAGCCTCTCCGTCCCAGCCCTCCCCTTTCCTCCTTCCTTCATACAA
ATCTGCGCTCGATGGACACGCTGGCATTCTTCGTAGGCATGCCGTAGAGA
TGACGGCCTTATTTCTTTTGATGTCGCTGAACAGCGTGTGCTAGATGCTC
TCAACACCTGGCAGATGCCCCTTTGCGTGTTTGGGGCTTGGTTGTTCGGC
GCGGAGAATTGTTCTTGCCCAACAAGACGTCAGTACCGACGTGTTTTTTG
TCATGAAGACCACCAGGACCTAGGAGACCAGGTCAAGCACTATACTCCAC
GATTGGCGGCCTTGTCGTGCACCGCACTCCCATGGCTTAGCCATTTCGAC
CACGACACGTGGAAGCCCTGCATGTGATGATCGCGAGGCACCCGGAGGGG
GCGACGCGACGAAGGAAATGGAATGCCCTTTGTTCGGAAAGACGATGGCA
GCCTATTGTTTCATGGGTACAGAGGCTGTCGCACGCGGCGGCAAGGGCCT
AGCGATAACATCTTCATCTTTCACCATCACATAACCCCATTCTCAGCAGC
CACCTTGCACGAGGGCAGCGGCGGGCTAAGCGGACGTTCCAAATCTATCC
CAGGCGGTCTTCGTTTTCTGTGCCCTTTCGATGCACTCTTTTTTTTACCA
TGAAGGTCATGAAAAGCTTCCCACACTCATCTCTACCCTTTCCACACACT
CGTAACACACCA back to topprotein sequence of jgi.p|Nanoce1779_2|597125 >mRNA_6997-protein ID=mRNA_6997-protein|Name=jgi.p|Nanoce1779_2|597125|organism=Nannochloropsis oceanica|type=polypeptide|length=172bp
MTMTTTHLNSRNVTFCQPSSFVSLTSVALFQLFRCVARAIVLRAWGQVIS
NHVPLSCSTRHLHHCHGIAFAFLTAAFWLVKVSRKAPAQRHHFMSQVSSS
HCSCPFRSSSPWPPSQQARGGRVGQPRHMTFWGSLFPPIFSASLLPPEKP
LLVFNHYHDVAHTSDKTCLSS* back to topmRNA from alignment at scaffold_17:663136..664847+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6997 ID=mRNA_6997|Name=jgi.p|Nanoce1779_2|597125|organism=Nannochloropsis oceanica|type=mRNA|length=1712bp|location=Sequence derived from alignment at scaffold_17:663136..664847+ (Nannochloropsis oceanica)
TTTATTATTGTGCCTTCATCCTTCTTTTACATGACTGCGTGGAGCTGGGG
GCTGTACGAAGGATGGCTCAAAGACGGCGATAGGTACGTCGGTGGACATC
CACTCAACATACCTGGTTTCTATGTTTCCGTCTCCATCCTCTCTTTGCGA
GTGCTCCACAACTCCTGTGGCCCAGCAGCCCCTGCGACGGCATGGGAAAG
CATCCAAGCGGAAACCAGGAAATGGGGACAAGTATTAAATAATTTAGAGA
TGCAAAACAAAAAGGCTTTGATTGCACAAAAAGTAGTTTTGTTGCGTCCC
CTTGCCTTGTGTTCCAAGGTTTTATCGGCGAAGTTTATAATCGCCGCCCG
AGGAGCATCTATCAAGAGGAGTGGACGACCGAGCAACAAAACACTCAAGT
CCCATGACCATGACCACGACGCATCTTAATTCCAGAAATGTCACTTTTTG
TCAACCCTCCTCATTCGTTAGTCTCACTAGTGTAGCCCTCTTCCAGCTCT
TTCGATGTGTCGCTCGAGCCATTGTTCTTCGTGCGTGGGGGCAGGTCATT
TCAAACCACGTACCACTGTCATGTTCGACGCGTCACCTGCACCACTGCCA
TGGCATTGCTTTTGCTTTCTTAACCGCAGCATTCTGGCTTGTCAAAGTTT
CTCGAAAGGCGCCTGCACAAAGGCACCATTTCATGTCCCAGGTGTCTTCG
AGCCATTGTTCTTGTCCTTTCCGCTCTTCCTCTCCCTGGCCCCCGAGCCA
GCAGGCGAGGGGCGGGCGCGTCGGGCAGCCTCGTCACATGACTTTTTGGG
GTTCACTTTTCCCTCCAATATTTTCTGCCTCGCTTTTGCCTCCCGAAAAA
CCGCTCTTGGTATTCAACCATTACCACGACGTAGCTCACACATCTGACAA
GACGTGCTTGTCTTCTTAAAATCCTCTGGGCGCTCTTTGATGGGACAAGA
GGAGCATGCTAAAAACCAGGAGGTGGCGGGCGAGGAGGCCTATCGCCCTC
GAGCGAGCCTCTCCGTCCCAGCCCTCCCCTTTCCTCCTTCCTTCATACAA
ATCTGCGCTCGATGGACACGCTGGCATTCTTCGTAGGCATGCCGTAGAGA
TGACGGCCTTATTTCTTTTGATGTCGCTGAACAGCGTGTGCTAGATGCTC
TCAACACCTGGCAGATGCCCCTTTGCGTGTTTGGGGCTTGGTTGTTCGGC
GCGGAGAATTGTTCTTGCCCAACAAGACGTCAGTACCGACGTGTTTTTTG
TCATGAAGACCACCAGGACCTAGGAGACCAGGTCAAGCACTATACTCCAC
GATTGGCGGCCTTGTCGTGCACCGCACTCCCATGGCTTAGCCATTTCGAC
CACGACACGTGGAAGCCCTGCATGTGATGATCGCGAGGCACCCGGAGGGG
GCGACGCGACGAAGGAAATGGAATGCCCTTTGTTCGGAAAGACGATGGCA
GCCTATTGTTTCATGGGTACAGAGGCTGTCGCACGCGGCGGCAAGGGCCT
AGCGATAACATCTTCATCTTTCACCATCACATAACCCCATTCTCAGCAGC
CACCTTGCACGAGGGCAGCGGCGGGCTAAGCGGACGTTCCAAATCTATCC
CAGGCGGTCTTCGTTTTCTGTGCCCTTTCGATGCACTCTTTTTTTTACCA
TGAAGGTCATGAAAAGCTTCCCACACTCATCTCTACCCTTTCCACACACT
CGTAACACACCA back to topCoding sequence (CDS) from alignment at scaffold_17:663136..664847+ >mRNA_6997 ID=mRNA_6997|Name=jgi.p|Nanoce1779_2|597125|organism=Nannochloropsis oceanica|type=CDS|length=516bp|location=Sequence derived from alignment at scaffold_17:663136..664847+ (Nannochloropsis oceanica)
ATGACCATGACCACGACGCATCTTAATTCCAGAAATGTCACTTTTTGTCA
ACCCTCCTCATTCGTTAGTCTCACTAGTGTAGCCCTCTTCCAGCTCTTTC
GATGTGTCGCTCGAGCCATTGTTCTTCGTGCGTGGGGGCAGGTCATTTCA
AACCACGTACCACTGTCATGTTCGACGCGTCACCTGCACCACTGCCATGG
CATTGCTTTTGCTTTCTTAACCGCAGCATTCTGGCTTGTCAAAGTTTCTC
GAAAGGCGCCTGCACAAAGGCACCATTTCATGTCCCAGGTGTCTTCGAGC
CATTGTTCTTGTCCTTTCCGCTCTTCCTCTCCCTGGCCCCCGAGCCAGCA
GGCGAGGGGCGGGCGCGTCGGGCAGCCTCGTCACATGACTTTTTGGGGTT
CACTTTTCCCTCCAATATTTTCTGCCTCGCTTTTGCCTCCCGAAAAACCG
CTCTTGGTATTCAACCATTACCACGACGTAGCTCACACATCTGACAAGAC
GTGCTTGTCTTCTTAA back to top
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