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Properties
| Property Name | Value |
|---|
| TranscriptId | 632012 |
| Track | FilteredModels2 |
| ProteinId | 631926 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:581814..583025 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6976 ID=mRNA_6976|Name=jgi.p|Nanoce1779_2|631926|organism=Nannochloropsis oceanica|type=mRNA|length=1183bp
GTTTTAGATACGCCTGAGCGCTCTCTGTTATCCAAACCGCCAAAACCGTT
GTGAAACCGCCGTGAAATAAAATGGGACGGCTGGAACGGTTTTGGGTGGG
CGCTATGGGGTTCTTGCTTGTCTTTCTCGGCGCCCTGTGTACGTATTATA
TGAAACTATACATGTACCTTGACTATTCATTTGAGCCCTCGGCTGAGGAG
TAGGGAATAAAGAAGAAGGGGACCCCTAAGAGTACCCCTTTGATATCTGC
CCAGTGATCAGAAGGGGGGGATCGCGCTACTAGCTTAGAAATCGAATTTC
AGCTCATGAATGAGACAGATCTCAACAAAGCAAACACATTGTGTTTATGA
GGCAAAAATACTTTTTTGTACGTATTTTGGTGCCGCAATAATTGCCTTCC
CCCCCCTGAGGGGGCAGGAATCGCTCAATTTCGAACTCTGCCACCTCTTG
CAGGCAGCCTCTCACGGCATATCGAGACCCCAAATCACACTAAAACGCCT
AAGCGACTGGGGACAGCTGGCAACTACGTCATCCAGCACAGATGGTGGAT
ATGCTGTCACATTCAAGCCCGACCCGGATGCTAGGACAGGAAATATGGAG
GCGGCGGTGGCCGAAGTGCCGGCGCAACGAAAGGAAGGGTTTAAGACCAA
GAGCCGGGCAACCGCCAGCCCATCGTGCAAAGGTGTGCAGGGGGGAGACT
CTGCGGGATGGCTTCTCTACTACTTGAACTATCTGAAGGGGTTGGACCGG
CTTTCTAGGGGCCCTGGGTTGGTGGACATCACGCCCCACCAAATTTGCAA
CCTGGACACGTGTGGACACCTTCCACCCTCAAGGCGTAGAAGGTTATTCG
CACCGGCCCCATTGAAGGAGAGTCATATCGTTGGCAGCAAGCACGGCACC
CATGTGACTGCCGTCTTTGCTTTGAAGGCTAATGGCGAGTACTCCTCTCC
GGGTAAAATGCCTGGTCTTCCAGCCATGGGAGGCCACAAAATTGACGAGT
GAAGCCTAATCGGAGTCGGTATCACGCAACTGTGAGGCAAGTCGGGTAGC
CAGGTCCTTCGCAATGAAGCGCAGGCGGCTTAGTGGGATAGCAAAGCCAT
GTTCGTAGCGGTAAATAATCAGTTTATATGCATAAATCACGCGGGTCCTT
CTTCAACAACTGCTCACGAAGGGAGTAGATGGG back to topprotein sequence of jgi.p|Nanoce1779_2|631926 >mRNA_6976-protein ID=mRNA_6976-protein|Name=jgi.p|Nanoce1779_2|631926|organism=Nannochloropsis oceanica|type=polypeptide|length=231bp
MRQISTKQTHCVYEAKILFCTYFGAAIIAFPPLRGQESLNFELCHLLQAA
SHGISRPQITLKRLSDWGQLATTSSSTDGGYAVTFKPDPDARTGNMEAAV
AEVPAQRKEGFKTKSRATASPSCKGVQGGDSAGWLLYYLNYLKGLDRLSR
GPGLVDITPHQICNLDTCGHLPPSRRRRLFAPAPLKESHIVGSKHGTHVT
AVFALKANGEYSSPGKMPGLPAMGGHKIDE* back to topmRNA from alignment at scaffold_17:581814..583025- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6976 ID=mRNA_6976|Name=jgi.p|Nanoce1779_2|631926|organism=Nannochloropsis oceanica|type=mRNA|length=1212bp|location=Sequence derived from alignment at scaffold_17:581814..583025- (Nannochloropsis oceanica)
GTTTTAGATACGCCTGAGCGCTCTCTGTTATCCAAACCGCCAAAACCGTT
GTGAAACCGCCGTGAAATAAAATGGGACGGCTGGAACGGTTTTGGGTGGG
CGCTATGGGGTTCTTGCTTGTCTTTCTCGGCGCCCTGTGTACGTATTATA
TGAAACTATACATGTACCTTGACTATTCATTTGAGCCCTCGGCTGAGGAG
TAGGGAATAAAGAAGAAGGGGACCCCTAAGAGTACCCCTTTGATATCTGC
CCAGTGATCAGAAGGGGGGGATCGCGCTACTAGCTTAGAAATCGAATTTC
AGCTCATGAATGAGACAGATCTCAACAAAGCAAACACATTGTGTTTATGA
GGCAAAAATACTTTTTTGTACGTATTTTGGTGCCGCAATAATTGCCTTCC
CCCCCCTGAGGGGGCAGGAATCGCTCAATTTCGAACTCTGCCACCTCTTG
CAGGCAGCCTCTCACGGCATATCGAGACCCCAAATCACACTAAAACGCCT
AAGCGACTGGGGACAGCTGGCAACTACGTCATCCAGCACAGATGGTGGAT
ATGCTGTCACATTCAAGCCCGACCCGGATGCTAGGACAGGAAATATGGAG
GCGGCGGTGGCCGAAGTGCCGGCGCAACGAAAGGAAGGGTTTAAGACCAA
GAGCCGGGCAACCGCCAGTAAGCGCGGCGTCCTCGTCTCCTCCCAGGCCC
ATCGTGCAAAGGTGTGCAGGGGGGAGACTCTGCGGGATGGCTTCTCTACT
ACTTGAACTATCTGAAGGGGTTGGACCGGCTTTCTAGGGGCCCTGGGTTG
GTGGACATCACGCCCCACCAAATTTGCAACCTGGACACGTGTGGACACCT
TCCACCCTCAAGGCGTAGAAGGTTATTCGCACCGGCCCCATTGAAGGAGA
GTCATATCGTTGGCAGCAAGCACGGCACCCATGTGACTGCCGTCTTTGCT
TTGAAGGCTAATGGCGAGTACTCCTCTCCGGGTAAAATGCCTGGTCTTCC
AGCCATGGGAGGCCACAAAATTGACGAGTGAAGCCTAATCGGAGTCGGTA
TCACGCAACTGTGAGGCAAGTCGGGTAGCCAGGTCCTTCGCAATGAAGCG
CAGGCGGCTTAGTGGGATAGCAAAGCCATGTTCGTAGCGGTAAATAATCA
GTTTATATGCATAAATCACGCGGGTCCTTCTTCAACAACTGCTCACGAAG
GGAGTAGATGGG back to topCoding sequence (CDS) from alignment at scaffold_17:581814..583025- >mRNA_6976 ID=mRNA_6976|Name=jgi.p|Nanoce1779_2|631926|organism=Nannochloropsis oceanica|type=CDS|length=1386bp|location=Sequence derived from alignment at scaffold_17:581814..583025- (Nannochloropsis oceanica)
GCCCATCGTGCAAAGGTGTGCAGGGGGGAGACTCTGCGGGATGGCTTCTC
TACTACTTGAACTATCTGAAGGGGTTGGACCGGCTTTCTAGGGGCCCTGG
GTTGGTGGACATCACGCCCCACCAAATTTGCAACCTGGACACGTGTGGAC
ACCTTCCACCCTCAAGGCGTAGAAGGTTATTCGCACCGGCCCCATTGAAG
GAGAGTCATATCGTTGGCAGCAAGCACGGCACCCATGTGACTGCCGTCTT
TGCTTTGAAGGCTAATGGCGAGTACTCCTCTCCGGGTAAAATGCCTGGTC
TTCCAGCCATGGGAGGCCACAAAATTGACGAGTGAATGAGACAGATCTCA
ACAAAGCAAACACATTGTGTTTATGAGGCAAAAATACTTTTTTGTACGTA
TTTTGGTGCCGCAATAATTGCCTTCCCCCCCCTGAGGGGGCAGGAATCGC
TCAATTTCGAACTCTGCCACCTCTTGCAGGCAGCCTCTCACGGCATATCG
AGACCCCAAATCACACTAAAACGCCTAAGCGACTGGGGACAGCTGGCAAC
TACGTCATCCAGCACAGATGGTGGATATGCTGTCACATTCAAGCCCGACC
CGGATGCTAGGACAGGAAATATGGAGGCGGCGGTGGCCGAAGTGCCGGCG
CAACGAAAGGAAGGGTTTAAGACCAAGAGCCGGGCAACCGCCAGCCCATC
GTGCAAAGGTGTGCAGGGGGGAGACTCTGCGGGATGGCTTCTCTACTACT
TGAACTATCTGAAGGGGTTGGACCGGCTTTCTAGGGGCCCTGGGTTGGTG
GACATCACGCCCCACCAAATTTGCAACCTGGACACGTGTGGACACCTTCC
ACCCTCAAGGCGTAGAAGGTTATTCGCACCGGCCCCATTGAAGGAGAGTC
ATATCGTTGGCAGCAAGCACGGCACCCATGTGACTGCCGTCTTTGCTTTG
AAGGCTAATGGCGAGTACTCCTCTCCGGGTAAAATGCCTGGTCTTCCAGC
CATGGGAGGCCACAAAATTGACGAGTGAATGAGACAGATCTCAACAAAGC
AAACACATTGTGTTTATGAGGCAAAAATACTTTTTTGTACGTATTTTGGT
GCCGCAATAATTGCCTTCCCCCCCCTGAGGGGGCAGGAATCGCTCAATTT
CGAACTCTGCCACCTCTTGCAGGCAGCCTCTCACGGCATATCGAGACCCC
AAATCACACTAAAACGCCTAAGCGACTGGGGACAGCTGGCAACTACGTCA
TCCAGCACAGATGGTGGATATGCTGTCACATTCAAGCCCGACCCGGATGC
TAGGACAGGAAATATGGAGGCGGCGGTGGCCGAAGTGCCGGCGCAACGAA
AGGAAGGGTTTAAGACCAAGAGCCGGGCAACCGCCA back to top
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