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Properties
| Property Name | Value |
|---|
| TranscriptId | 573912 |
| Track | FilteredModels2 |
| ProteinId | 573826 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:215396..217267 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_697 ID=mRNA_697|Name=jgi.p|Nanoce1779_2|573826|organism=Nannochloropsis oceanica|type=mRNA|length=1566bp
AGGCTCACGAACAAACCCGGGGGCTTCTTCGTCGTCTCCACCCATCCCTG
CCAGCACCGCCACCAGTCATCATGACGCTCAAGGTGGAGGAGTTGAGCAC
ACCTCAACTCATAACAATGTTCCTCATCACGGTCATGGGCGGCTACTTTG
TGGTGGTGCACATAATCTTTTTCCTGATGGATGTGATCAAGCTCAGCAAG
ATTCCGGGTCCGGTCCCCGTGCCTGTCCTCGGCAATCTCTACGATCGCAT
GGCCCTCACCTCGTTCATCGGCTGGCTCAGTAAGCTCCGCCGCAAATATG
GGAAGATATATCGGGTCTTCACAGGCTCTCGGGCGTATGTAGTGCTGATG
GACAAGGTGGCCGCTCGCGAGGCTTTGAGCGATCCTCGTACATTTGTTAA
GGGACCGGATTACAAGGAGAAATTCTCGTTCGTCTTTGGTGATGGCTTGG
TGACGAGCGTGGGGGAAAAGCACAAGACCGACCGGGCATTGTTCGCCAAG
TATTTCACGCAGAAAAAGATTGAAATGCATCTGCCGGTGTTGTGTGAGCA
GACGCTCAAGGCGATCAACTCTGAGATGGAGCCTCATGTGGGACAAGGGC
AGGGAGTTGTTGATTTGGAGCATTTCTTCTCTATTTTGGCCTTCAAGATG
TTTTGCCGGTTTGCGATCAACCACGAGTTTGTGGAGTCAGAAGTTTGGAG
TGAATTGACGTCGCGGGGGTCGAATATCATCGGGGAGAGTATTGTGTTGG
GCATACCAGTGACCACCTGGATCCCGCGTGTGAAGAAGCTCTTAGAGGAC
ACGGAGAGGTTCCACAGGTGCTGCGACCCGTTGATTGACGCAAGGATTCT
GGCGCATAGCAAGGGGGAAGAGATGGTGGACGACCCCTTGACGGTGATGG
TGCAGGAGAAGATGACCCGGAAGCAGATGTACAGCCACTTGGTGACGATG
TTGGCGGCGGGGCACGACACAACAGCATTTTGCACTTGTTATACCCTCTT
TTTGTTGGCAAAGAACCCCAAAATTCAGGCGAAGCTCAAGGCCGAGATCA
AGCGGGTGATGGGTACACGGACAAACATCACGCCTGAGGACATTGCGCAG
TTGACCTATGCCAAAAATTGCTTCCAGGAGTCGCTGCGCATTTACTCGGT
CGTGCCCCATGTGACCCGTGTCTGTATCCGAGACACTAAGCTCTCGTGTG
GCGTGACGGTCCCTGCCAACACGGAGGTGCTCGTGCCCATTTGTCTGCTG
AACCGCGATACGGACGAGTGGGGCGCACCTATCGATGCCTTTGACCCTGA
TCGCTTCGAGGGTATCACTCGGGAGTCTCCTTCCAAGGGCTACTTCCCCT
TTGGGTACTCGACGCGGTCCTGCATTGGTGCGACGTTGGCGTTGATCGAG
GGAACAGTAATGATCACGTTGTTGGCCCAGCGGTATACGTTCTTGGAGGA
GCCGTCATTCAAGCTTAAATTGAAAAGTGGGATTACGATGGTGTCATCGA
ATGGAGTCAAGGTCCGCGTGCAACGGGACATGGACTATGCATCGTAGGAG
GGAGAGGGGGGCGGAG back to topprotein sequence of jgi.p|Nanoce1779_2|573826 >mRNA_697-protein ID=mRNA_697-protein|Name=jgi.p|Nanoce1779_2|573826|organism=Nannochloropsis oceanica|type=polypeptide|length=492bp
MTLKVEELSTPQLITMFLITVMGGYFVVVHIIFFLMDVIKLSKIPGPVPV
PVLGNLYDRMALTSFIGWLSKLRRKYGKIYRVFTGSRAYVVLMDKVAARE
ALSDPRTFVKGPDYKEKFSFVFGDGLVTSVGEKHKTDRALFAKYFTQKKI
EMHLPVLCEQTLKAINSEMEPHVGQGQGVVDLEHFFSILAFKMFCRFAIN
HEFVESEVWSELTSRGSNIIGESIVLGIPVTTWIPRVKKLLEDTERFHRC
CDPLIDARILAHSKGEEMVDDPLTVMVQEKMTRKQMYSHLVTMLAAGHDT
TAFCTCYTLFLLAKNPKIQAKLKAEIKRVMGTRTNITPEDIAQLTYAKNC
FQESLRIYSVVPHVTRVCIRDTKLSCGVTVPANTEVLVPICLLNRDTDEW
GAPIDAFDPDRFEGITRESPSKGYFPFGYSTRSCIGATLALIEGTVMITL
LAQRYTFLEEPSFKLKLKSGITMVSSNGVKVRVQRDMDYAS* back to topmRNA from alignment at scaffold_2:215396..217267+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_697 ID=mRNA_697|Name=jgi.p|Nanoce1779_2|573826|organism=Nannochloropsis oceanica|type=mRNA|length=1872bp|location=Sequence derived from alignment at scaffold_2:215396..217267+ (Nannochloropsis oceanica)
AGGCTCACGAACAAACCCGGGGGCTTCTTCGTCGTCTCCACCCATCCCTG
CCAGCACCGCCACCAGTCATCATGACGCTCAAGGTGGAGGAGTTGAGCAC
ACCTCAACTCATAACAATGGTATGTCTTATCTCGCGGGGCCTGGCAAGGG
TGGATGGTGGGCAGCGAAGGGGAAAGAACACGATTTCTGGAATTAGTGCT
TGACATGCCCCCCTGACCCCCCCCTTTTCCCATTCCCGCCTTCCCTCTAG
TTCCTCATCACGGTCATGGGCGGCTACTTTGTGGTGGTGCACATAATCTT
TTTCCTGATGGATGTGATCAAGCTCAGCAAGATTCCGGGTCCGGTCCCCG
TGCCTGTCCTCGGCAATCTCTACGATCGCATGGCCCTCACCTCGGTACGT
ATGGAACGCATCGGTGGGGGCGGTGTGCCATTGAATACATTTCTGCTTAT
AATAATGTCCCTGAACATTCTTATTGTCCCTCCTCAAGCACATGGTCATC
CCGGTCGCCGCTTTTCCTCGTCAGACACTCACCCTCCCCTCCTTCTCCCC
TCCTTGTCACCCCAAACAGTTCATCGGCTGGCTCAGTAAGCTCCGCCGCA
AATATGGGAAGATATATCGGGTCTTCACAGGCTCTCGGGCGTATGTAGTG
CTGATGGACAAGGTGGCCGCTCGCGAGGCTTTGAGCGATCCTCGTACATT
TGTTAAGGGACCGGATTACAAGGAGAAATTCTCGTTCGTCTTTGGTGATG
GCTTGGTGACGAGCGTGGGGGAAAAGCACAAGACCGACCGGGCATTGTTC
GCCAAGTATTTCACGCAGAAAAAGATTGAAATGCATCTGCCGGTGTTGTG
TGAGCAGACGCTCAAGGCGATCAACTCTGAGATGGAGCCTCATGTGGGAC
AAGGGCAGGGAGTTGTTGATTTGGAGCATTTCTTCTCTATTTTGGCCTTC
AAGATGTTTTGCCGGTTTGCGATCAACCACGAGTTTGTGGAGTCAGAAGT
TTGGAGTGAATTGACGTCGCGGGGGTCGAATATCATCGGGGAGAGTATTG
TGTTGGGCATACCAGTGACCACCTGGATCCCGCGTGTGAAGAAGCTCTTA
GAGGACACGGAGAGGTTCCACAGGTGCTGCGACCCGTTGATTGACGCAAG
GATTCTGGCGCATAGCAAGGGGGAAGAGATGGTGGACGACCCCTTGACGG
TGATGGTGCAGGAGAAGATGACCCGGAAGCAGATGTACAGCCACTTGGTG
ACGATGTTGGCGGCGGGGCACGACACAACAGCATTTTGCACTTGTTATAC
CCTCTTTTTGTTGGCAAAGAACCCCAAAATTCAGGCGAAGCTCAAGGCCG
AGATCAAGCGGGTGATGGGTACACGGACAAACATCACGCCTGAGGACATT
GCGCAGTTGACCTATGCCAAAAATTGCTTCCAGGAGTCGCTGCGCATTTA
CTCGGTCGTGCCCCATGTGACCCGTGTCTGTATCCGAGACACTAAGCTCT
CGTGTGGCGTGACGGTCCCTGCCAACACGGAGGTGCTCGTGCCCATTTGT
CTGCTGAACCGCGATACGGACGAGTGGGGCGCACCTATCGATGCCTTTGA
CCCTGATCGCTTCGAGGGTATCACTCGGGAGTCTCCTTCCAAGGGCTACT
TCCCCTTTGGGTACTCGACGCGGTCCTGCATTGGTGCGACGTTGGCGTTG
ATCGAGGGAACAGTAATGATCACGTTGTTGGCCCAGCGGTATACGTTCTT
GGAGGAGCCGTCATTCAAGCTTAAATTGAAAAGTGGGATTACGATGGTGT
CATCGAATGGAGTCAAGGTCCGCGTGCAACGGGACATGGACTATGCATCG
TAGGAGGGAGAGGGGGGCGGAG back to topCoding sequence (CDS) from alignment at scaffold_2:215396..217267+ >mRNA_697 ID=mRNA_697|Name=jgi.p|Nanoce1779_2|573826|organism=Nannochloropsis oceanica|type=CDS|length=4428bp|location=Sequence derived from alignment at scaffold_2:215396..217267+ (Nannochloropsis oceanica)
ATGACGCTCAAGGTGGAGGAGTTGAGCACACCTCAACTCATAACAATGTT
CCTCATCACGGTCATGGGCGGCTACTTTGTGGTGGTGCACATAATCTTTT
TCCTGATGGATGTGATCAAGCTCAGCAAGATTCCGGGTCCGGTCCCCGTG
CCTGTCCTCGGCAATCTCTACGATCGCATGGCCCTCACCTCGTTCATCGG
CTGGCTCAGTAAGCTCCGCCGCAAATATGGGAAGATATATCGGGTCTTCA
CAGGCTCTCGGGCGTATGTAGTGCTGATGGACAAGGTGGCCGCTCGCGAG
GCTTTGAGCGATCCTCGTACATTTGTTAAGGGACCGGATTACAAGGAGAA
ATTCTCGTTCGTCTTTGGTGATGGCTTGGTGACGAGCGTGGGGGAAAAGC
ACAAGACCGACCGGGCATTGTTCGCCAAGTATTTCACGCAGAAAAAGATT
GAAATGCATCTGCCGGTGTTGTGTGAGCAGACGCTCAAGGCGATCAACTC
TGAGATGGAGCCTCATGTGGGACAAGGGCAGGGAGTTGTTGATTTGGAGC
ATTTCTTCTCTATTTTGGCCTTCAAGATGTTTTGCCGGTTTGCGATCAAC
CACGAGTTTGTGGAGTCAGAAGTTTGGAGTGAATTGACGTCGCGGGGGTC
GAATATCATCGGGGAGAGTATTGTGTTGGGCATACCAGTGACCACCTGGA
TCCCGCGTGTGAAGAAGCTCTTAGAGGACACGGAGAGGTTCCACAGGTGC
TGCGACCCGTTGATTGACGCAAGGATTCTGGCGCATAGCAAGGGGGAAGA
GATGGTGGACGACCCCTTGACGGTGATGGTGCAGGAGAAGATGACCCGGA
AGCAGATGTACAGCCACTTGGTGACGATGTTGGCGGCGGGGCACGACACA
ACAGCATTTTGCACTTGTTATACCCTCTTTTTGTTGGCAAAGAACCCCAA
AATTCAGGCGAAGCTCAAGGCCGAGATCAAGCGGGTGATGGGTACACGGA
CAAACATCACGCCTGAGGACATTGCGCAGTTGACCTATGCCAAAAATTGC
TTCCAGGAGTCGCTGCGCATTTACTCGGTCGTGCCCCATGTGACCCGTGT
CTGTATCCGAGACACTAAGCTCTCGTGTGGCGTGACGGTCCCTGCCAACA
CGGAGGTGCTCGTGCCCATTTGTCTGCTGAACCGCGATACGGACGAGTGG
GGCGCACCTATCGATGCCTTTGACCCTGATCGCTTCGAGGGTATCACTCG
GGAGTCTCCTTCCAAGGGCTACTTCCCCTTTGGGTACTCGACGCGGTCCT
GCATTGGTGCGACGTTGGCGTTGATCGAGGGAACAGTAATGATCACGTTG
TTGGCCCAGCGGTATACGTTCTTGGAGGAGCCGTCATTCAAGCTTAAATT
GAAAAGTGGGATTACGATGGTGTCATCGAATGGAGTCAAGGTCCGCGTGC
AACGGGACATGGACTATGCATCGTAGATGACGCTCAAGGTGGAGGAGTTG
AGCACACCTCAACTCATAACAATGTTCCTCATCACGGTCATGGGCGGCTA
CTTTGTGGTGGTGCACATAATCTTTTTCCTGATGGATGTGATCAAGCTCA
GCAAGATTCCGGGTCCGGTCCCCGTGCCTGTCCTCGGCAATCTCTACGAT
CGCATGGCCCTCACCTCGTTCATCGGCTGGCTCAGTAAGCTCCGCCGCAA
ATATGGGAAGATATATCGGGTCTTCACAGGCTCTCGGGCGTATGTAGTGC
TGATGGACAAGGTGGCCGCTCGCGAGGCTTTGAGCGATCCTCGTACATTT
GTTAAGGGACCGGATTACAAGGAGAAATTCTCGTTCGTCTTTGGTGATGG
CTTGGTGACGAGCGTGGGGGAAAAGCACAAGACCGACCGGGCATTGTTCG
CCAAGTATTTCACGCAGAAAAAGATTGAAATGCATCTGCCGGTGTTGTGT
GAGCAGACGCTCAAGGCGATCAACTCTGAGATGGAGCCTCATGTGGGACA
AGGGCAGGGAGTTGTTGATTTGGAGCATTTCTTCTCTATTTTGGCCTTCA
AGATGTTTTGCCGGTTTGCGATCAACCACGAGTTTGTGGAGTCAGAAGTT
TGGAGTGAATTGACGTCGCGGGGGTCGAATATCATCGGGGAGAGTATTGT
GTTGGGCATACCAGTGACCACCTGGATCCCGCGTGTGAAGAAGCTCTTAG
AGGACACGGAGAGGTTCCACAGGTGCTGCGACCCGTTGATTGACGCAAGG
ATTCTGGCGCATAGCAAGGGGGAAGAGATGGTGGACGACCCCTTGACGGT
GATGGTGCAGGAGAAGATGACCCGGAAGCAGATGTACAGCCACTTGGTGA
CGATGTTGGCGGCGGGGCACGACACAACAGCATTTTGCACTTGTTATACC
CTCTTTTTGTTGGCAAAGAACCCCAAAATTCAGGCGAAGCTCAAGGCCGA
GATCAAGCGGGTGATGGGTACACGGACAAACATCACGCCTGAGGACATTG
CGCAGTTGACCTATGCCAAAAATTGCTTCCAGGAGTCGCTGCGCATTTAC
TCGGTCGTGCCCCATGTGACCCGTGTCTGTATCCGAGACACTAAGCTCTC
GTGTGGCGTGACGGTCCCTGCCAACACGGAGGTGCTCGTGCCCATTTGTC
TGCTGAACCGCGATACGGACGAGTGGGGCGCACCTATCGATGCCTTTGAC
CCTGATCGCTTCGAGGGTATCACTCGGGAGTCTCCTTCCAAGGGCTACTT
CCCCTTTGGGTACTCGACGCGGTCCTGCATTGGTGCGACGTTGGCGTTGA
TCGAGGGAACAGTAATGATCACGTTGTTGGCCCAGCGGTATACGTTCTTG
GAGGAGCCGTCATTCAAGCTTAAATTGAAAAGTGGGATTACGATGGTGTC
ATCGAATGGAGTCAAGGTCCGCGTGCAACGGGACATGGACTATGCATCGT
AGATGACGCTCAAGGTGGAGGAGTTGAGCACACCTCAACTCATAACAATG
TTCCTCATCACGGTCATGGGCGGCTACTTTGTGGTGGTGCACATAATCTT
TTTCCTGATGGATGTGATCAAGCTCAGCAAGATTCCGGGTCCGGTCCCCG
TGCCTGTCCTCGGCAATCTCTACGATCGCATGGCCCTCACCTCGTTCATC
GGCTGGCTCAGTAAGCTCCGCCGCAAATATGGGAAGATATATCGGGTCTT
CACAGGCTCTCGGGCGTATGTAGTGCTGATGGACAAGGTGGCCGCTCGCG
AGGCTTTGAGCGATCCTCGTACATTTGTTAAGGGACCGGATTACAAGGAG
AAATTCTCGTTCGTCTTTGGTGATGGCTTGGTGACGAGCGTGGGGGAAAA
GCACAAGACCGACCGGGCATTGTTCGCCAAGTATTTCACGCAGAAAAAGA
TTGAAATGCATCTGCCGGTGTTGTGTGAGCAGACGCTCAAGGCGATCAAC
TCTGAGATGGAGCCTCATGTGGGACAAGGGCAGGGAGTTGTTGATTTGGA
GCATTTCTTCTCTATTTTGGCCTTCAAGATGTTTTGCCGGTTTGCGATCA
ACCACGAGTTTGTGGAGTCAGAAGTTTGGAGTGAATTGACGTCGCGGGGG
TCGAATATCATCGGGGAGAGTATTGTGTTGGGCATACCAGTGACCACCTG
GATCCCGCGTGTGAAGAAGCTCTTAGAGGACACGGAGAGGTTCCACAGGT
GCTGCGACCCGTTGATTGACGCAAGGATTCTGGCGCATAGCAAGGGGGAA
GAGATGGTGGACGACCCCTTGACGGTGATGGTGCAGGAGAAGATGACCCG
GAAGCAGATGTACAGCCACTTGGTGACGATGTTGGCGGCGGGGCACGACA
CAACAGCATTTTGCACTTGTTATACCCTCTTTTTGTTGGCAAAGAACCCC
AAAATTCAGGCGAAGCTCAAGGCCGAGATCAAGCGGGTGATGGGTACACG
GACAAACATCACGCCTGAGGACATTGCGCAGTTGACCTATGCCAAAAATT
GCTTCCAGGAGTCGCTGCGCATTTACTCGGTCGTGCCCCATGTGACCCGT
GTCTGTATCCGAGACACTAAGCTCTCGTGTGGCGTGACGGTCCCTGCCAA
CACGGAGGTGCTCGTGCCCATTTGTCTGCTGAACCGCGATACGGACGAGT
GGGGCGCACCTATCGATGCCTTTGACCCTGATCGCTTCGAGGGTATCACT
CGGGAGTCTCCTTCCAAGGGCTACTTCCCCTTTGGGTACTCGACGCGGTC
CTGCATTGGTGCGACGTTGGCGTTGATCGAGGGAACAGTAATGATCACGT
TGTTGGCCCAGCGGTATACGTTCTTGGAGGAGCCGTCATTCAAGCTTAAA
TTGAAAAGTGGGATTACGATGGTGTCATCGAATGGAGTCAAGGTCCGCGT
GCAACGGGACATGGACTATGCATCGTAG back to top
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