Properties
| Property Name | Value |
|---|
| TranscriptId | 632003 |
| Track | FilteredModels2 |
| ProteinId | 631917 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:549885..552500 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6966 ID=mRNA_6966|Name=jgi.p|Nanoce1779_2|631917|organism=Nannochloropsis oceanica|type=mRNA|length=2048bp
GGGGGAGGTGGGAGCGGCAGTGGTGGTGGAGGAGGGGGAGGACGAGGGGG
AGGGGGGAGTAAGAAAAGGGTTTTCTTGTCAGCTGAAGAGAAGGCTGCTC
AGTCGAGATTTCGGAATCGGGAACATGCGAGGAACACGCGGTTGAGGAAG
AAGGCTTACACCAAAAAGTTGAAGGAGCTGGTGGAGGACTTGGAGAGACA
GCGGAAGGAGGAGAGCAAGGCCAAGGACCTGCGGACGAACCAAGCGATTG
AAGAAGTCGATCACCGGAACACGGTCGTCAAAAAGTTTCTACAATACCGC
GCCACGGACGAGAGGGACAGGAGGAAGTGGGCCGAGGTACTCGAGGAATC
GTGTGTGGTCACCATGCCTATAACACCTTATCGCTTTTTCCCCCGTCGGG
AGGTGCAGAATGGCCTAAGGGTCATCCAAGGGATTGACGCTGTCATGGCA
GATGCCTCGTCTCTTCGTTTGATGGTGGAAGCAGTGCGTTGGTCTTCTCT
GGCCATCGCTTCTTCTTCTTGTGCTGCTCCTTCTTCTCCTTTGGCGCCCT
TGTCCTCGTCCTCATCTTCGGCGGCGACTGCAAAGAGTCACAGCCAGCAC
AACAATGGAGGAGGGTTTGGAGGGGTTGGAGGAAGGACTGTGCACTTTGG
GGAAGGAGGAGGAATGAGCATGTCGGCGCCTGTGACGATAATGTACGAAG
TGAGTCCCGAGGACATCATTATGTCGAAGGACACCCTTATGTGCCGCTGG
ACCATGCGCTCGGAAAGCAGTAATTATATCCCTTCCTCCCTCCCGTCCTC
GACCTCGTCCCCGGCCTCAGTCCCTTCTTCACCCACCGATCAACAAAAAC
AACGACATCAGGGACAACAGCAGCAGCATATGAATGCGTCCTCGTCGTCC
CTGTCATCTTCTCCTGATGCGCGGTCCTTATTCGTAGGGGAAGGGGGAAG
AAGCAACAAGGATCCTTCCTCTGGGAAGAAATGCAATGGAGGTACAGGAG
CGGGAGGAGAAAGAGAAGATGGGAGAGAAGGTGGAATGGTGAATTACAAT
CACAGAAGTCGCAATGAGCAACCCCAGCTGCTGCAACAGCAGCAGCAGGA
GTGGAACAACGAACACGCCACTCACGACAACAGCAGCTGCAGCAGCAGCA
GCAACAACAACAACAACAACAAGAACAAGAACAAGAACAACAACAACAAC
AACAACAGAAGCAGCAATATCGTAGAGCTCGGGGTCGAAGGGATGCTGTA
CTGTCGTTTCAACGACCAAGACAGACTGACAAGTGTCGAGATCATGTTCG
ACGTCATGACCGTCATGCAGCAGCTCCAGCGTGCGAGCGGGGTCTCGTGC
GATTTCCTCATCGTCCCCAATTCCCTGGAAGGGGCCTGCCAAAGGGCAGC
TACTGCCCGTGTGTTGGTCAAGGCGGAGGCGCCCTACCCCGTCTTGCATG
TGAATGAGCATTGGACGAGCTTGAGGGGCCAGACACAGGTGGACGTGGAG
GGGCAACCACTTGATTTGCTCGAGGGATCGACGCTGGCGCCGGGGACGGG
CTTCATGGTCAGTGAGGTGATGGGGGGGAGACCTGCGAGCTGCATTATGC
TGGTGTTCAAGGCCTGTCGACAGGCGTTCACAGGCTACCTGCAATTGTTC
CCTTTGCACGCTAATGCGGGTGGAGGGTGGGGGGGAGGGGGGAAGGAAGG
AGGGGGAAGTGTGCCGACACCGACGCACATTTTGGGCATCTTACGGAAGG
TGCCATTAGCAGGGTATGATATGCATCATGCCACCCATTTGTCGTACTCC
ACTATGGCGGCTGTACGATCAACCGCTCAACCAGCCAGTCAGAACACGAA
GAGCTCGAAATGTAGCCGTCGTAAGAGAGAGAGTCAGCAGCAGCAAGAAA
ATGAGAAGAGGTAATAGCACAATTGATAATATTCAATGCTTCTATGAAAA
AGTGAGGAAGGATATGTCTGGGTATACGTTTTCTTCGAGTATAACAAGGA
TTCAGATGAAGCAATGGCCATCAGCGCACATATAAACTTGCCGCCTAC back to topprotein sequence of jgi.p|Nanoce1779_2|631917 >mRNA_6966-protein ID=mRNA_6966-protein|Name=jgi.p|Nanoce1779_2|631917|organism=Nannochloropsis oceanica|type=polypeptide|length=517bp
MPITPYRFFPRREVQNGLRVIQGIDAVMADASSLRLMVEAVRWSSLAIAS
SSCAAPSSPLAPLSSSSSSAATAKSHSQHNNGGGFGGVGGRTVHFGEGGG
MSMSAPVTIMYEVSPEDIIMSKDTLMCRWTMRSESSNYIPSSLPSSTSSP
ASVPSSPTDQQKQRHQGQQQQHMNASSSSLSSSPDARSLFVGEGGRSNKD
PSSGKKCNGGTGAGGEREDGREGGMVNYNHRSRNEQPQLLQQQQQEWNNE
HATHDNSSCSSSSNNNNNNKNKNKNNNNNNNRSSNIVELGVEGMLYCRFN
DQDRLTSVEIMFDVMTVMQQLQRASGVSCDFLIVPNSLEGACQRAATARV
LVKAEAPYPVLHVNEHWTSLRGQTQVDVEGQPLDLLEGSTLAPGTGFMVS
EVMGGRPASCIMLVFKACRQAFTGYLQLFPLHANAGGGWGGGGKEGGGSV
PTPTHILGILRKVPLAGYDMHHATHLSYSTMAAVRSTAQPASQNTKSSKC
SRRKRESQQQQENEKR* back to topmRNA from alignment at scaffold_17:549885..552500- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6966 ID=mRNA_6966|Name=jgi.p|Nanoce1779_2|631917|organism=Nannochloropsis oceanica|type=mRNA|length=2616bp|location=Sequence derived from alignment at scaffold_17:549885..552500- (Nannochloropsis oceanica)
GGGGGAGGTGGGAGCGGCAGTGGTGGTGGAGGAGGGGGAGGACGAGGGGG
AGGGGGGAGTAAGAAAAGGGTTTTCTTGTCAGCTGAAGAGAAGGCTGCTC
AGTCGAGATTTCGGAATCGGGAACATGCGAGGAACACGCGGTTGAGGAAG
AAGGCTTACACCAAAAAGTTGAAGGAGCTGGTGGAGGACTTGGAGAGACA
GCGGAAGGAGGAGAGCAAGGCCAAGGACCTGCGGACGAACCAAGCGATTG
AAGAAGTCGATCACCGGAACACGGTCGTCAAAAAGTTTCTACAATACCGC
GCCACGGACGAGAGGGACAGGAGGAAGTGGGCCGAGGTACTCGAGGAATC
GTGTGTGGTCACCATGCCTATAACACCTTATCGCTTTTTCCCCCGTCGGG
AGGTGCAGAATGGCCTAAGGGTCATCCAAGGGATTGACGCTGTCATGGCA
GATGCCTCGTCTCTTCGTTTGATGGTGGAAGCAGTGCGTTGGTCTTCTCT
GGCCATCGCTTCTTCTTCTTGTGCTGCTCCTTCTTCTCCTTTGGCGCCCT
TGTCCTCGTCCTCATCTTCGGCGGCGACTGCAAAGAGTCACAGCCAGCAC
AACAATGGAGGAGGGTTTGGAGGGGTTGGAGGAAGGACTGTGCACTTTGG
GGAAGGAGGAGGAATGAGCATGTCGGCGCCTGTGACGATAATGTACGAAG
TGAGTCCCGAGGACATCATTATGTCGAAGGACACCCTTATGTGCCGCTGG
ACCATGCGCTCGGAAAGCAGTAATTATATCCCTTCCTCCCTCCCGTCCTC
GACCTCGTCCCCGGCCTCAGTCCCTTCTTCACCCACCGATCAACAAAAAC
AACGACATCAGGGACAACAGCAGCAGCATATGAATGCGTCCTCGTCGTCC
CTGTCATCTTCTCCTGATGCGCGGTCCTTATTCGTAGGGGAAGGGGGAAG
AAGCAACAAGGATCCTTCCTCTGGGAAGAAATGCAATGGAGGTACAGGAG
CGGGAGGAGAAAGAGAAGATGGGAGAGAAGGTGGAATGGTGAATTACAAT
CACAGAAGTCGCAATGAGCAACCCCAGCTGCTGCAACAGCAGCAGCAGGA
GTGGAACAACGAACACGCCACTCACGACAACAGCAGCTGCAGCAGCAGCA
GCAACAACAACAACAACAACAAGAACAAGAACAAGAACAACAACAACAAC
AACAACAGAAGCAGCAATATCGTAGAGCTCGGGGTCGAAGGGATGCTGTA
CTGTCGTTTCAACGACCAAGACAGACTGACAAGTGTCGAGATCATGTTCG
ACGTCATGACCGTCATGCAGCAGCTCCAGCGTGCGAGCGGGGTCTCGTGC
GATTTCCTCATCGTCCCCAATTCCCTGGAAGGGGCCTGCCAAAGGGCAGC
TACTGCCCGTGTGTTGGTCAAGGCGGAGGCGCCCTACCCCGTCTTGCATG
TGAATGAGCATTGGACGAGCTTGAGGGGCCAGACACAGGTGGACGTGGAG
GGGCAACCACTTGATTTGCTCGAGGGATCGACGCTGGCGCCGGGGACGGG
CTTCATGGTCAGTGAGGTGATGGGGGGGAGACCTGCGAGCTGCATTATGC
TGGTGTTCAAGGCCTGTCGACAGGCGTTCACAGGCTACCTGCAATTGTTC
CCTTTGCACGCTAATGCGGGTGGAGGGTGGGGGGGAGGGGGGAAGGAAGG
AGGGGGAAGTGTGCCGACACCGACGCACATTTTGGGCATCTTACGGAAGG
TGCCATTAGCAGGGTATGATATGCATCATGCCACCCATTTGTCGTACTCC
ACTATGGCGGCTGGTCAGCAGCAGCAGCAGCAGCAACAGCAGAAATTACA
GCTGGTGCAGCAGCATCAACAACAGCAACAGCAACAGTATCACCATCAAC
AGCAGCAGCAGCAGCAGCAGCATAAGCAGACACCAGCACTGTTCGGAGGA
GGACCAGGGAGAGGGATGGGGTATCAGCAGGGGGGAGGGAGGGTTTGACA
GAAAGTAAGGAGACGATGAGGAAAAGGGGACGATAGACGTTTTTGATGTC
TGTGGGTTGGTGTCTGATGGAGTTAGAGAGTGTGTGTCATTGACGAGTGT
CTGATACATGGGCAAATATAAATAATATCATTATACATAAACATATTACG
GCCTCCAGCTAAAGAACGACAGCAGCAGCAGCCGCCGCCGCCGCAACAGT
GTAGCAGCAGCTGACAGCTGACGGCAATGATGTGCATGCCATGGCTCAAT
CAGCCGCGAGACTGAACATCGTCAGGATGCAGGAGGCAATCTAGACGGCG
AGTAGAAAGACGTATATGAGGAAGGGGAATTTACTAGATAGGGTCCCAAT
AAGGAGATATGTGTTTCCATTATTATTGCAGTACGATCAACCGCTCAACC
AGCCAGTCAGAACACGAAGAGCTCGAAATGTAGCCGTCGTAAGAGAGAGA
GTCAGCAGCAGCAAGAAAATGAGAAGAGGTAATAGCACAATTGATAATAT
TCAATGCTTCTATGAAAAAGTGAGGAAGGATATGTCTGGGTATACGTTTT
CTTCGAGTATAACAAGGATTCAGATGAAGCAATGGCCATCAGCGCACATA
TAAACTTGCCGCCTAC back to topCoding sequence (CDS) from alignment at scaffold_17:549885..552500- >mRNA_6966 ID=mRNA_6966|Name=jgi.p|Nanoce1779_2|631917|organism=Nannochloropsis oceanica|type=CDS|length=3102bp|location=Sequence derived from alignment at scaffold_17:549885..552500- (Nannochloropsis oceanica)
TACGATCAACCGCTCAACCAGCCAGTCAGAACACGAAGAGCTCGAAATGT
AGCCGTCGTAAGAGAGAGAGTCAGCAGCAGCAAGAAAATGAGAAGAGGTA
AATGCCTATAACACCTTATCGCTTTTTCCCCCGTCGGGAGGTGCAGAATG
GCCTAAGGGTCATCCAAGGGATTGACGCTGTCATGGCAGATGCCTCGTCT
CTTCGTTTGATGGTGGAAGCAGTGCGTTGGTCTTCTCTGGCCATCGCTTC
TTCTTCTTGTGCTGCTCCTTCTTCTCCTTTGGCGCCCTTGTCCTCGTCCT
CATCTTCGGCGGCGACTGCAAAGAGTCACAGCCAGCACAACAATGGAGGA
GGGTTTGGAGGGGTTGGAGGAAGGACTGTGCACTTTGGGGAAGGAGGAGG
AATGAGCATGTCGGCGCCTGTGACGATAATGTACGAAGTGAGTCCCGAGG
ACATCATTATGTCGAAGGACACCCTTATGTGCCGCTGGACCATGCGCTCG
GAAAGCAGTAATTATATCCCTTCCTCCCTCCCGTCCTCGACCTCGTCCCC
GGCCTCAGTCCCTTCTTCACCCACCGATCAACAAAAACAACGACATCAGG
GACAACAGCAGCAGCATATGAATGCGTCCTCGTCGTCCCTGTCATCTTCT
CCTGATGCGCGGTCCTTATTCGTAGGGGAAGGGGGAAGAAGCAACAAGGA
TCCTTCCTCTGGGAAGAAATGCAATGGAGGTACAGGAGCGGGAGGAGAAA
GAGAAGATGGGAGAGAAGGTGGAATGGTGAATTACAATCACAGAAGTCGC
AATGAGCAACCCCAGCTGCTGCAACAGCAGCAGCAGGAGTGGAACAACGA
ACACGCCACTCACGACAACAGCAGCTGCAGCAGCAGCAGCAACAACAACA
ACAACAACAAGAACAAGAACAAGAACAACAACAACAACAACAACAGAAGC
AGCAATATCGTAGAGCTCGGGGTCGAAGGGATGCTGTACTGTCGTTTCAA
CGACCAAGACAGACTGACAAGTGTCGAGATCATGTTCGACGTCATGACCG
TCATGCAGCAGCTCCAGCGTGCGAGCGGGGTCTCGTGCGATTTCCTCATC
GTCCCCAATTCCCTGGAAGGGGCCTGCCAAAGGGCAGCTACTGCCCGTGT
GTTGGTCAAGGCGGAGGCGCCCTACCCCGTCTTGCATGTGAATGAGCATT
GGACGAGCTTGAGGGGCCAGACACAGGTGGACGTGGAGGGGCAACCACTT
GATTTGCTCGAGGGATCGACGCTGGCGCCGGGGACGGGCTTCATGGTCAG
TGAGGTGATGGGGGGGAGACCTGCGAGCTGCATTATGCTGGTGTTCAAGG
CCTGTCGACAGGCGTTCACAGGCTACCTGCAATTGTTCCCTTTGCACGCT
AATGCGGGTGGAGGGTGGGGGGGAGGGGGGAAGGAAGGAGGGGGAAGTGT
GCCGACACCGACGCACATTTTGGGCATCTTACGGAAGGTGCCATTAGCAG
GGTATGATATGCATCATGCCACCCATTTGTCGTACTCCACTATGGCGGCT
GTACGATCAACCGCTCAACCAGCCAGTCAGAACACGAAGAGCTCGAAATG
TAGCCGTCGTAAGAGAGAGAGTCAGCAGCAGCAAGAAAATGAGAAGAGGT
AAATGCCTATAACACCTTATCGCTTTTTCCCCCGTCGGGAGGTGCAGAAT
GGCCTAAGGGTCATCCAAGGGATTGACGCTGTCATGGCAGATGCCTCGTC
TCTTCGTTTGATGGTGGAAGCAGTGCGTTGGTCTTCTCTGGCCATCGCTT
CTTCTTCTTGTGCTGCTCCTTCTTCTCCTTTGGCGCCCTTGTCCTCGTCC
TCATCTTCGGCGGCGACTGCAAAGAGTCACAGCCAGCACAACAATGGAGG
AGGGTTTGGAGGGGTTGGAGGAAGGACTGTGCACTTTGGGGAAGGAGGAG
GAATGAGCATGTCGGCGCCTGTGACGATAATGTACGAAGTGAGTCCCGAG
GACATCATTATGTCGAAGGACACCCTTATGTGCCGCTGGACCATGCGCTC
GGAAAGCAGTAATTATATCCCTTCCTCCCTCCCGTCCTCGACCTCGTCCC
CGGCCTCAGTCCCTTCTTCACCCACCGATCAACAAAAACAACGACATCAG
GGACAACAGCAGCAGCATATGAATGCGTCCTCGTCGTCCCTGTCATCTTC
TCCTGATGCGCGGTCCTTATTCGTAGGGGAAGGGGGAAGAAGCAACAAGG
ATCCTTCCTCTGGGAAGAAATGCAATGGAGGTACAGGAGCGGGAGGAGAA
AGAGAAGATGGGAGAGAAGGTGGAATGGTGAATTACAATCACAGAAGTCG
CAATGAGCAACCCCAGCTGCTGCAACAGCAGCAGCAGGAGTGGAACAACG
AACACGCCACTCACGACAACAGCAGCTGCAGCAGCAGCAGCAACAACAAC
AACAACAACAAGAACAAGAACAAGAACAACAACAACAACAACAACAGAAG
CAGCAATATCGTAGAGCTCGGGGTCGAAGGGATGCTGTACTGTCGTTTCA
ACGACCAAGACAGACTGACAAGTGTCGAGATCATGTTCGACGTCATGACC
GTCATGCAGCAGCTCCAGCGTGCGAGCGGGGTCTCGTGCGATTTCCTCAT
CGTCCCCAATTCCCTGGAAGGGGCCTGCCAAAGGGCAGCTACTGCCCGTG
TGTTGGTCAAGGCGGAGGCGCCCTACCCCGTCTTGCATGTGAATGAGCAT
TGGACGAGCTTGAGGGGCCAGACACAGGTGGACGTGGAGGGGCAACCACT
TGATTTGCTCGAGGGATCGACGCTGGCGCCGGGGACGGGCTTCATGGTCA
GTGAGGTGATGGGGGGGAGACCTGCGAGCTGCATTATGCTGGTGTTCAAG
GCCTGTCGACAGGCGTTCACAGGCTACCTGCAATTGTTCCCTTTGCACGC
TAATGCGGGTGGAGGGTGGGGGGGAGGGGGGAAGGAAGGAGGGGGAAGTG
TGCCGACACCGACGCACATTTTGGGCATCTTACGGAAGGTGCCATTAGCA
GGGTATGATATGCATCATGCCACCCATTTGTCGTACTCCACTATGGCGGC
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