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Properties
| Property Name | Value |
|---|
| TranscriptId | 597033 |
| Track | FilteredModels2 |
| ProteinId | 596947 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:548287..549884 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6965 ID=mRNA_6965|Name=jgi.p|Nanoce1779_2|596947|organism=Nannochloropsis oceanica|type=mRNA|length=1374bp
GGTGGCTCATCCCTCGCTTGGCCACGTGGGCACCTCTTTTGTCCCCCATC
GTTGCTCTCACTTCATTTTCCCCTGTTTTGTTATTTCCCTCCCTTGTCCA
TTCTATCATTCCCTGGCCCCTGCTCTTTGGAATGAGCAGACAAAACGCTC
AGCCCCGGGAGAAGGTGCGGCATACATGCCCCTCTCATTGTTGATTTTTC
ATCACCAATCATAGACAATAATTTGAAATTGCTCGCACGAAAACATACAT
GAATAAAGGTTCAATCTATCCACTGGACTATTGGTGCGTAAAATATGCGC
ATGCTTGAGATGCTGGGACATCAGAATGCACCATGGCGTTGCTGTACAAG
TCGAGACAGGGCAACTGAAAGTCTTTCGTGTTGACGGCTAGATCCACAGT
AGATAAAGGGAAGATCATAGGTCTTAGAGTTCTGACAAGGACATCCACAG
GGTTGTTATTGTTGCCCCTGGTGGAAGCGGCGGAGGGAGTGCAAGCATGT
GGACGCTGGCTGGGAGGTAAACCCCCCCCTTAAAATCTCATTGCAGCATA
CATGTATGCTACCTCTCTGTGGCACAAGTCAATGCGCTTGCATTCAAATG
AAGAGAGCTCTTAAAAGAAAACCAAGCACCCACAGCAATCGACTCGGAAA
GCGGAAAGGAACGCAACGAAATGGACCTGCTTCCTCCAAGGGGTTTATGC
TTCATCGCCTAGACCTGTTCCCTTGCTTCGCCTCTACGCTTCCAGCACAA
GCGTCCATAAACAAACACACTGTCAAACTCAACCCTTTCTCCTACACCGA
TACCCTCCTCCGGTACCTTCACCCCTCTCCGCACAGGCAAACACACCAGG
ACTATCCTTACGTCGGCACGACCAGCACAAAATATATCATGTCGAGCGCA
GGCGGCGGGGTCTACGGAAACTACGGTGCAGGGGCAGGTGCGGGAGGCGG
CGAGGCGGGTCTTGGCCTTGGGGCTGGGACAGGTGGAGGCATGGCGCGGA
GTGAAGTGATGGGTGTGACTTATTTGTGTGGGGACTGCGGTGCCCAAAAT
GTGATCAAGAACAAAGATCCCATTCGATGCCGGCAATGCAACCACCGTAT
CATGTACAAGATGCGAACGAAGCGTGTGGTCCAGTTTGAGGCACGGTAGT
GCGGGAAGGGAGGGCGAGATGCCGAAGGAGGGAAGAGGCCCGCCAGGTCA
TTGGTTCCAGCCACGGTCTCGAACATCTTCTACCATGTAAAATTTTCAAC
GAAAAGGGCACGAGAACAACATCTAAGGAAGGTGGGATGCTGCTTGAGAC
AGGAAGGATAGATGAGAGACTTACAGAGCCAACGGAACCACCTTAAAGCA
AAGAAAACACATCACATACGTAAA back to topprotein sequence of jgi.p|Nanoce1779_2|596947 >mRNA_6965-protein ID=mRNA_6965-protein|Name=jgi.p|Nanoce1779_2|596947|organism=Nannochloropsis oceanica|type=polypeptide|length=198bp
MLPLCGTSQCACIQMKRALKRKPSTHSNRLGKRKGTQRNGPASSKGFMLH
RLDLFPCFASTLPAQASINKHTVKLNPFSYTDTLLRYLHPSPHRQTHQDY
PYVGTTSTKYIMSSAGGGVYGNYGAGAGAGGGEAGLGLGAGTGGGMARSE
VMGVTYLCGDCGAQNVIKNKDPIRCRQCNHRIMYKMRTKRVVQFEAR* back to topmRNA from alignment at scaffold_17:548287..549884- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6965 ID=mRNA_6965|Name=jgi.p|Nanoce1779_2|596947|organism=Nannochloropsis oceanica|type=mRNA|length=1598bp|location=Sequence derived from alignment at scaffold_17:548287..549884- (Nannochloropsis oceanica)
GGTGGCTCATCCCTCGCTTGGCCACGTGGGCACCTCTTTTGTCCCCCATC
GTTGCTCTCACTTCATTTTCCCCTGTTTTGTTATTTCCCTCCCTTGTCCA
TTCTATCATTCCCTGGCCCCTGCTCTTTGGAATGAGCAGACAAAACGCTC
AGCCCCGGGAGAAGGTGCGGCATACATGCCCCTCTCATTGTTGATTTTTC
ATCACCAATCATAGACAATAATTTGAAATTGCTCGCACGAAAACATACAT
GAATAAAGGTTCAATCTATCCACTGGACTATTGGTGCGTAAAATATGCGC
ATGCTTGAGATGCTGGGACATCAGAATGCACCATGGCGTTGCTGTACAAG
TCGAGACAGGGCAACTGAAAGTCTTTCGTGTTGACGGCTAGATCCACAGT
AGATAAAGGGAAGATCATAGGTCTTAGAGTTCTGACAAGGACATCCACAG
GGTTGTTATTGTTGCCCCTGGTGGAAGCGGCGGAGGGAGTGCAAGCATGT
GGACGCTGGCTGGGAGGTAAACCCCCCCCTTAAAATCTCATTGCAGCATA
CATGTATGCTACCTCTCTGTGGCACAAGTCAATGCGCTTGCATTCAAATG
AAGAGAGCTCTTAAAAGAAAACCAAGCACCCACAGCAATCGACTCGGAAA
GCGGAAAGGAACGCAACGAAATGGACCTGCTTCCTCCAAGGGGTTTATGC
TTCATCGCCTAGACCTGTTCCCTTGCTTCGCCTCTACGCTTCCAGCACAA
GCGTCCATAAACAAACACACTGTCAAACTCAACCCTTTCTCCTACACCGA
TACCCTCCTCCGGTACCTTCACCCCTCTCCGCACAGGCAAACACACCAGG
ACTATCCTTACGTCGGCACGACCAGCACAAAATATATCATGTCGAGCGCA
GGCGGCGGGGTCTACGGAAACTACGGTGCAGGGGCAGGTGCGGGAGGCGG
CGAGGCGGGTCTTGGCCTTGGGGCTGGGACAGGTGGAGGCATGGCGCGGA
GTGAAGTGATGGGTGTGACTTATTTGTGTGGGGGTACGTCGTAAAGTGCG
GGTGGAGGGAGGCGGGGAACAGGGAGGGAAGGTCAGAGGTCGCCGGCGCT
GAACACAGTGTCACAGTATAGAGGCGGTGAATAGTTGGCCTGTGCATGTA
CGTGCTACGTGGTTGTGTCCTTGCTTTGTATTTATACGCGCATAACTGAT
ATTGCCCTCCCCTCCCCTCACTCGCTCCGTCCCTCCCCCCCTTCTCTCAT
TTCCAAGACTGCGGTGCCCAAAATGTGATCAAGAACAAAGATCCCATTCG
ATGCCGGCAATGCAACCACCGTATCATGTACAAGATGCGAACGAAGCGTG
TGGTCCAGTTTGAGGCACGGTAGTGCGGGAAGGGAGGGCGAGATGCCGAA
GGAGGGAAGAGGCCCGCCAGGTCATTGGTTCCAGCCACGGTCTCGAACAT
CTTCTACCATGTAAAATTTTCAACGAAAAGGGCACGAGAACAACATCTAA
GGAAGGTGGGATGCTGCTTGAGACAGGAAGGATAGATGAGAGACTTACAG
AGCCAACGGAACCACCTTAAAGCAAAGAAAACACATCACATACGTAAA back to topCoding sequence (CDS) from alignment at scaffold_17:548287..549884- >mRNA_6965 ID=mRNA_6965|Name=jgi.p|Nanoce1779_2|596947|organism=Nannochloropsis oceanica|type=CDS|length=1188bp|location=Sequence derived from alignment at scaffold_17:548287..549884- (Nannochloropsis oceanica)
ACTGCGGTGCCCAAAATGTGATCAAGAACAAAGATCCCATTCGATGCCGG
CAATGCAACCACCGTATCATGTACAAGATGCGAACGAAGCGTGTGGTCCA
GTTTGAGGCACGGTAGATGCTACCTCTCTGTGGCACAAGTCAATGCGCTT
GCATTCAAATGAAGAGAGCTCTTAAAAGAAAACCAAGCACCCACAGCAAT
CGACTCGGAAAGCGGAAAGGAACGCAACGAAATGGACCTGCTTCCTCCAA
GGGGTTTATGCTTCATCGCCTAGACCTGTTCCCTTGCTTCGCCTCTACGC
TTCCAGCACAAGCGTCCATAAACAAACACACTGTCAAACTCAACCCTTTC
TCCTACACCGATACCCTCCTCCGGTACCTTCACCCCTCTCCGCACAGGCA
AACACACCAGGACTATCCTTACGTCGGCACGACCAGCACAAAATATATCA
TGTCGAGCGCAGGCGGCGGGGTCTACGGAAACTACGGTGCAGGGGCAGGT
GCGGGAGGCGGCGAGGCGGGTCTTGGCCTTGGGGCTGGGACAGGTGGAGG
CATGGCGCGGAGTGAAGTGATGGGTGTGACTTATTTGTGTGGGGACTGCG
GTGCCCAAAATGTGATCAAGAACAAAGATCCCATTCGATGCCGGCAATGC
AACCACCGTATCATGTACAAGATGCGAACGAAGCGTGTGGTCCAGTTTGA
GGCACGGTAGATGCTACCTCTCTGTGGCACAAGTCAATGCGCTTGCATTC
AAATGAAGAGAGCTCTTAAAAGAAAACCAAGCACCCACAGCAATCGACTC
GGAAAGCGGAAAGGAACGCAACGAAATGGACCTGCTTCCTCCAAGGGGTT
TATGCTTCATCGCCTAGACCTGTTCCCTTGCTTCGCCTCTACGCTTCCAG
CACAAGCGTCCATAAACAAACACACTGTCAAACTCAACCCTTTCTCCTAC
ACCGATACCCTCCTCCGGTACCTTCACCCCTCTCCGCACAGGCAAACACA
CCAGGACTATCCTTACGTCGGCACGACCAGCACAAAATATATCATGTCGA
GCGCAGGCGGCGGGGTCTACGGAAACTACGGTGCAGGGGCAGGTGCGGGA
GGCGGCGAGGCGGGTCTTGGCCTTGGGGCTGGGACAGGTGGAGGCATGGC
GCGGAGTGAAGTGATGGGTGTGACTTATTTGTGTGGGG back to top
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