jgi.p|Nanoce1779_2|530670, mRNA_6926 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|530670
Unique NamemRNA_6926
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length753
Alignment locationscaffold_17:445759..446511 -

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Properties
Property NameValue
TranscriptId530756
TrackFilteredModels2
ProteinId530670
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_17supercontigscaffold_17:445759..446511 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|530670gene_6926Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_6926CDS_6926Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|530670mRNA_6926-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_6926 ID=mRNA_6926|Name=jgi.p|Nanoce1779_2|530670|organism=Nannochloropsis oceanica|type=mRNA|length=753bp
ATGCTAGCACACAACCCCCAACTCAAGGCCTCCCTCTCCTCCCTCATCGC
CCGCCTGGAGAAGGAAGCTCTCTCAATCCCTTCCACCCCCCTTCCTCCCT
CTTCCTCTGCTCCTCCCCCGTCATTCAATGGCTCGAGCCCTACTGCATTG
CTTGCTTCTTTGCAGCCGGCTTACTGCTCCATCGATTCATACGGATGGGA
CCAGGGGGAATACAACAGCGCATGGGTGTCTGTCTACGTGACGTTACCAG
GGGTCGGGAAAGTGAAAGATGCGGTACATTGCGCTTTCACTCCGTTTGGA
TTTGACCTGAAGATTGAAGGATTGGAAGGTGGGAAGAACTATCGGCTCGT
GAAGGATAACCTGGAAAAGGGTATTGTGGTTGAGGATTCGAAGGTCAAGG
TGAAAGAAAATAAGGTGGTGGTCATGCTGAAGAAGAGGAAGGGGGAGTTT
GGTTCTTATGATCATTGGATGGACCTTACAGCGAAGAAAAAGGTGGGAGG
GGGAGGAGGAGGGAAGGACGGAGGAGGGTTAGGAGGGGGAGATGGAGGAA
TGGGGGGGTTGATGGATGTGATGAAGCAGATGTATGAAGAGGGGGACGAT
ACAATTAAGAAGACGATTGCCGAGTCGATGATGAAGGTGCAGAGGGGGGA
CAGAAGTGGAAGTGGGATGCCTGAATTTGGTGGAGGAGGGTTGGGGGGCG
GGAGAGCGGGAGGGATGGGGGGAGGGATGGAGGAAATGGATGATTTCCTG
TAA
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protein sequence of jgi.p|Nanoce1779_2|530670

>mRNA_6926-protein ID=mRNA_6926-protein|Name=jgi.p|Nanoce1779_2|530670|organism=Nannochloropsis oceanica|type=polypeptide|length=251bp
MLAHNPQLKASLSSLIARLEKEALSIPSTPLPPSSSAPPPSFNGSSPTAL
LASLQPAYCSIDSYGWDQGEYNSAWVSVYVTLPGVGKVKDAVHCAFTPFG
FDLKIEGLEGGKNYRLVKDNLEKGIVVEDSKVKVKENKVVVMLKKRKGEF
GSYDHWMDLTAKKKVGGGGGGKDGGGLGGGDGGMGGLMDVMKQMYEEGDD
TIKKTIAESMMKVQRGDRSGSGMPEFGGGGLGGGRAGGMGGGMEEMDDFL
*
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mRNA from alignment at scaffold_17:445759..446511-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_6926 ID=mRNA_6926|Name=jgi.p|Nanoce1779_2|530670|organism=Nannochloropsis oceanica|type=mRNA|length=753bp|location=Sequence derived from alignment at scaffold_17:445759..446511- (Nannochloropsis oceanica)
ATGCTAGCACACAACCCCCAACTCAAGGCCTCCCTCTCCTCCCTCATCGC
CCGCCTGGAGAAGGAAGCTCTCTCAATCCCTTCCACCCCCCTTCCTCCCT
CTTCCTCTGCTCCTCCCCCGTCATTCAATGGCTCGAGCCCTACTGCATTG
CTTGCTTCTTTGCAGCCGGCTTACTGCTCCATCGATTCATACGGATGGGA
CCAGGGGGAATACAACAGCGCATGGGTGTCTGTCTACGTGACGTTACCAG
GGGTCGGGAAAGTGAAAGATGCGGTACATTGCGCTTTCACTCCGTTTGGA
TTTGACCTGAAGATTGAAGGATTGGAAGGTGGGAAGAACTATCGGCTCGT
GAAGGATAACCTGGAAAAGGGTATTGTGGTTGAGGATTCGAAGGTCAAGG
TGAAAGAAAATAAGGTGGTGGTCATGCTGAAGAAGAGGAAGGGGGAGTTT
GGTTCTTATGATCATTGGATGGACCTTACAGCGAAGAAAAAGGTGGGAGG
GGGAGGAGGAGGGAAGGACGGAGGAGGGTTAGGAGGGGGAGATGGAGGAA
TGGGGGGGTTGATGGATGTGATGAAGCAGATGTATGAAGAGGGGGACGAT
ACAATTAAGAAGACGATTGCCGAGTCGATGATGAAGGTGCAGAGGGGGGA
CAGAAGTGGAAGTGGGATGCCTGAATTTGGTGGAGGAGGGTTGGGGGGCG
GGAGAGCGGGAGGGATGGGGGGAGGGATGGAGGAAATGGATGATTTCCTG
TAA
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Coding sequence (CDS) from alignment at scaffold_17:445759..446511-

>mRNA_6926 ID=mRNA_6926|Name=jgi.p|Nanoce1779_2|530670|organism=Nannochloropsis oceanica|type=CDS|length=753bp|location=Sequence derived from alignment at scaffold_17:445759..446511- (Nannochloropsis oceanica)
ATGCTAGCACACAACCCCCAACTCAAGGCCTCCCTCTCCTCCCTCATCGC
CCGCCTGGAGAAGGAAGCTCTCTCAATCCCTTCCACCCCCCTTCCTCCCT
CTTCCTCTGCTCCTCCCCCGTCATTCAATGGCTCGAGCCCTACTGCATTG
CTTGCTTCTTTGCAGCCGGCTTACTGCTCCATCGATTCATACGGATGGGA
CCAGGGGGAATACAACAGCGCATGGGTGTCTGTCTACGTGACGTTACCAG
GGGTCGGGAAAGTGAAAGATGCGGTACATTGCGCTTTCACTCCGTTTGGA
TTTGACCTGAAGATTGAAGGATTGGAAGGTGGGAAGAACTATCGGCTCGT
GAAGGATAACCTGGAAAAGGGTATTGTGGTTGAGGATTCGAAGGTCAAGG
TGAAAGAAAATAAGGTGGTGGTCATGCTGAAGAAGAGGAAGGGGGAGTTT
GGTTCTTATGATCATTGGATGGACCTTACAGCGAAGAAAAAGGTGGGAGG
GGGAGGAGGAGGGAAGGACGGAGGAGGGTTAGGAGGGGGAGATGGAGGAA
TGGGGGGGTTGATGGATGTGATGAAGCAGATGTATGAAGAGGGGGACGAT
ACAATTAAGAAGACGATTGCCGAGTCGATGATGAAGGTGCAGAGGGGGGA
CAGAAGTGGAAGTGGGATGCCTGAATTTGGTGGAGGAGGGTTGGGGGGCG
GGAGAGCGGGAGGGATGGGGGGAGGGATGGAGGAAATGGATGATTTCCTG
TAA
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Synonyms
Publications