Properties
| Property Name | Value |
|---|
| TranscriptId | 116815 |
| Track | FilteredModels2 |
| ProteinId | 116729 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:425224..426343 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6917 ID=mRNA_6917|Name=jgi.p|Nanoce1779_2|116729|organism=Nannochloropsis oceanica|type=mRNA|length=981bp
CGACTACGAACTACTTCATAAGTACTGCCTAAGTCTCCATGCTTTGGTAC
TTACTGCCTACCCATAATCCAAACAACCAACAGCCTCGCCGCGGGGTTCA
CCTACCCCCTCCTGGGCTCCCTTAAAGCCATCAAGATGTCTGAGCCCGTG
GTCATGAAATTCTTCATTAAATACTTCCTTCTCTACTCCCTCCTCAACCT
CTCCGACACCTACCTCCCCATCTTTCCCTCCTTACCCCTCTACTACATCT
TCAAGACCCTCTTCCTCCTCTGGGCCTTCAACCCGAAGACACAAGGCGCC
AACATCATCTACACCGCCCTACGCCCCTTTCTCCTTCCACGCCTCGGCAT
CGCCATACGAGCCGCGACTGCTGAAGCCTCCGGGCAAGGAGGACAACATC
TCAAAAAGAGCAAAAAGGGCGAGAAGGCCGGAGGGGAGCTAGTGACGGCT
ATGGTCGGGACCGAGGGGATCAGTGCCACTACCGCCACCAGTGGCAGCAA
TAGCAGCAGCAGCAGCAGCAGTGGTGGGGAGAGTCCGACAATTACATTGC
GGATTGAGCTCGCTGCACGGGGACTGGAAATGCCTGCAGAACCCGAGCGT
CTCGATACCCTGTGTCAGCTTCGCATCTTGCCGGCGGGACTAAAAAGAGG
AGGAGGAGGAGGAGGAGGAGCAGGAGGAGCAGGTAAAGACAAAGCGGAAA
GGAAACCGGCGTTGGACGAGGGCCAGTGGTACAAGTCGCGTTTACACACC
TCCCAGCCTCAAGACGCGCCTGATTGGAGGAATGATCCTCAATTCTTACG
AGTGCCGACCCTCGATGACAATGTTTTGGAGGTTTTGGTCGTGAACAAGA
TGAGCTGGAAAGATCAACCGTTGGGGAGGGTGAGACTGCCGTTAAAAGGG
TTAACGTTTCCCGTGGACACGACGTTGCCCCTGGAGGCCCCTCATAAGGC
AACAACGACAACTTAATACAACCGAATGTCT back to topprotein sequence of jgi.p|Nanoce1779_2|116729 >mRNA_6917-protein ID=mRNA_6917-protein|Name=jgi.p|Nanoce1779_2|116729|organism=Nannochloropsis oceanica|type=polypeptide|length=277bp
MSEPVVMKFFIKYFLLYSLLNLSDTYLPIFPSLPLYYIFKTLFLLWAFNP
KTQGANIIYTALRPFLLPRLGIAIRAATAEASGQGGQHLKKSKKGEKAGG
ELVTAMVGTEGISATTATSGSNSSSSSSSGGESPTITLRIELAARGLEMP
AEPERLDTLCQLRILPAGLKRGGGGGGGAGGAGKDKAERKPALDEGQWYK
SRLHTSQPQDAPDWRNDPQFLRVPTLDDNVLEVLVVNKMSWKDQPLGRVR
LPLKGLTFPVDTTLPLEAPHKATTTT* back to topmRNA from alignment at scaffold_17:425224..426343- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6917 ID=mRNA_6917|Name=jgi.p|Nanoce1779_2|116729|organism=Nannochloropsis oceanica|type=mRNA|length=1120bp|location=Sequence derived from alignment at scaffold_17:425224..426343- (Nannochloropsis oceanica)
CGACTACGAACTACTTCATAAGTACTGCCTAAGTCTCCATGCTTTGGTAC
TTACTGCCTACCCATAATCCAAACAACCAACAGCCTCGCCGCGGGGTTCA
CCTACCCCCTCCTGGGCTCCCTTAAAGCCATCAAGATGTCTGAGCCCGTG
GTCATGAAATTCTTCATTAAATACTTCCTTCTCTACTCCCTCCTCAACCT
CTCCGACACCTACCTCCCCATCTTTCCCTCCTTACCCCTCTACTACATCT
TCAAGACCCTCTTCCTCCTCTGGGCCTTCAACCCGAAGACACAAGGCGCC
AACATCATCTACACCGCCCTACGCCCCTTTCTCCTTCCACGCCTCGGCAT
CGCCATACGAGCCGCGACTGCTGAAGCCTCCGGGCAAGGAGGACAACATC
TCAAAAAGAGCAAAAAGGGCGAGAAGGCCGGAGGGGAGCTAGTGACGGCT
ATGGTCGGGACCGAGGGGATCAGTGCCACTACCGCCACCAGTGGCAGCAA
TAGCAGCAGCAGCAGCAGCAGTGGTGGGGAGAGTCCGACAATTACATTGC
GGATTGAGCTCGCTGCACGGGGACTGGAAATGCCTGCAGAACCCGAGCGT
CTCGATACCCTGTGTCAGCTTCGCATCTTGCCGGCGGGACTAAAAAGAGG
AGGAGGAGGAGGAGGAGGAGCAGGAGGAGCAGGTAAAGACAAAGCGGAAA
GGAAACCGGCGTTGGACGAGGGCCAGTGGTACAAGTCGCGTTTACACACC
TCCCAGCCTCAAGACGCGCCTGATTGGAGGAATGATCCTCAATTCTTACG
AGTGCCGACCCTCGATGACAATGTTTTGGAGGTTTTGGTCGTGAACAAGA
TGAGCTGGAAAGATCAACCGTTGGGGAGGGTGAGACTGCCGTTAAAAGGG
TTAACGTTTCCCGTGGACACGACGTTGCCCCTGGAGGCCCCTCATAAGGC
GGAGCTGGCGGAAGAAGGAGCCGGGGGGGATGATGGGGAGGAAGGGGGGA
TGCAGGGGGAGTTGGAGATTCACTTGGAGTTGGCCTAGAGAGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGTAGGCACCGAAGGCAACAACGACAA
CTTAATACAACCGAATGTCT back to topCoding sequence (CDS) from alignment at scaffold_17:425224..426343- >mRNA_6917 ID=mRNA_6917|Name=jgi.p|Nanoce1779_2|116729|organism=Nannochloropsis oceanica|type=CDS|length=1662bp|location=Sequence derived from alignment at scaffold_17:425224..426343- (Nannochloropsis oceanica)
GCAACAACGACAACTTAAATGTCTGAGCCCGTGGTCATGAAATTCTTCAT
TAAATACTTCCTTCTCTACTCCCTCCTCAACCTCTCCGACACCTACCTCC
CCATCTTTCCCTCCTTACCCCTCTACTACATCTTCAAGACCCTCTTCCTC
CTCTGGGCCTTCAACCCGAAGACACAAGGCGCCAACATCATCTACACCGC
CCTACGCCCCTTTCTCCTTCCACGCCTCGGCATCGCCATACGAGCCGCGA
CTGCTGAAGCCTCCGGGCAAGGAGGACAACATCTCAAAAAGAGCAAAAAG
GGCGAGAAGGCCGGAGGGGAGCTAGTGACGGCTATGGTCGGGACCGAGGG
GATCAGTGCCACTACCGCCACCAGTGGCAGCAATAGCAGCAGCAGCAGCA
GCAGTGGTGGGGAGAGTCCGACAATTACATTGCGGATTGAGCTCGCTGCA
CGGGGACTGGAAATGCCTGCAGAACCCGAGCGTCTCGATACCCTGTGTCA
GCTTCGCATCTTGCCGGCGGGACTAAAAAGAGGAGGAGGAGGAGGAGGAG
GAGCAGGAGGAGCAGGTAAAGACAAAGCGGAAAGGAAACCGGCGTTGGAC
GAGGGCCAGTGGTACAAGTCGCGTTTACACACCTCCCAGCCTCAAGACGC
GCCTGATTGGAGGAATGATCCTCAATTCTTACGAGTGCCGACCCTCGATG
ACAATGTTTTGGAGGTTTTGGTCGTGAACAAGATGAGCTGGAAAGATCAA
CCGTTGGGGAGGGTGAGACTGCCGTTAAAAGGGTTAACGTTTCCCGTGGA
CACGACGTTGCCCCTGGAGGCCCCTCATAAGGCAACAACGACAACTTAAA
TGTCTGAGCCCGTGGTCATGAAATTCTTCATTAAATACTTCCTTCTCTAC
TCCCTCCTCAACCTCTCCGACACCTACCTCCCCATCTTTCCCTCCTTACC
CCTCTACTACATCTTCAAGACCCTCTTCCTCCTCTGGGCCTTCAACCCGA
AGACACAAGGCGCCAACATCATCTACACCGCCCTACGCCCCTTTCTCCTT
CCACGCCTCGGCATCGCCATACGAGCCGCGACTGCTGAAGCCTCCGGGCA
AGGAGGACAACATCTCAAAAAGAGCAAAAAGGGCGAGAAGGCCGGAGGGG
AGCTAGTGACGGCTATGGTCGGGACCGAGGGGATCAGTGCCACTACCGCC
ACCAGTGGCAGCAATAGCAGCAGCAGCAGCAGCAGTGGTGGGGAGAGTCC
GACAATTACATTGCGGATTGAGCTCGCTGCACGGGGACTGGAAATGCCTG
CAGAACCCGAGCGTCTCGATACCCTGTGTCAGCTTCGCATCTTGCCGGCG
GGACTAAAAAGAGGAGGAGGAGGAGGAGGAGGAGCAGGAGGAGCAGGTAA
AGACAAAGCGGAAAGGAAACCGGCGTTGGACGAGGGCCAGTGGTACAAGT
CGCGTTTACACACCTCCCAGCCTCAAGACGCGCCTGATTGGAGGAATGAT
CCTCAATTCTTACGAGTGCCGACCCTCGATGACAATGTTTTGGAGGTTTT
GGTCGTGAACAAGATGAGCTGGAAAGATCAACCGTTGGGGAGGGTGAGAC
TGCCGTTAAAAGGGTTAACGTTTCCCGTGGACACGACGTTGCCCCTGGAG
GCCCCTCATAAG back to top
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