Properties
| Property Name | Value |
|---|
| TranscriptId | 596838 |
| Track | FilteredModels2 |
| ProteinId | 596752 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:408336..409894 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6910 ID=mRNA_6910|Name=jgi.p|Nanoce1779_2|596752|organism=Nannochloropsis oceanica|type=mRNA|length=1402bp
AAAATATGCGTGAAAAGCGTGGGGAGGGGTGGATGATTCCGGTCGTGTGT
CTGTTGCCCCGCCCCCTGCTTGTTGTTGTTGAGCTTTGCGAATGCAATGT
GCCGCTTGGTGGGTTGCCGCCACCAGTCCCGAAACCAGCGCCACGATCGT
ATAAATTGCCTTGTGCTACCAATGGCTGCACTGCTCTCCAGCATTGAGGC
GACCAGTGGCAGGCTACAGGGCAGAGACGATGCCCTCCATCTTTCTGCCT
GTTTTATGATGATTTCTTGTCTCTTTCCTCTCGCTCCTCGAGAGGCCTCG
TTTGTCTCGCCCATAAAAATTGTTCAAATACTACCATTACAATCATTGCA
AAGGGTTTCCTCATGTGAAACAATCAATGGAGCAAACGCGACTGTACGTT
TTAATTTCTGGCGGTCGCATTGTATCACTTTCATGAATTGCTCGCTGCTC
AGCTGTCTCCCTTTATTTCTTTTTTGGTGGTGCGAGGGTCGAATTTGTTA
TTTCTGTTGTGATTCCCGGAGGCATCCGTCGGGTCTCATAGTCAAGTTTT
TGTCTGTTTCAAGTTTGTGCATAAAGTCTCTAGTATGGTGCTTTGCCTTT
CGTCCGGGGGGGAGGTTGATAAAGGGGGGGGGAGGACTGGCACCATGCAA
ATGTCGGACGAAAACTTTATGGATGAGGCCCTGGACATGTAATTATTCAT
ACGTTCGAGTACTTCATCCATATCTGTGATAACACGTCACTTTGTACATT
AAAATCGAGTCCTGACTAAGTTGTGAGTGCATGTCGTCCGTCCATGATGA
AATCCACGCCCTAACGAAGTTCATGCTTGAACACAGGACAGGTTGAGTGG
TGAATCAAGTAAACAAAGTGCTACTCGTCCAACGTGCAGACAGGTGATCG
ATTGGTGTGTTTCGGGGCCATCCTGACGTTTAGAATTCGCTTTTGACACC
TGCTCTCGATTTTTTTTTGTTCTTGCTGTGTTTCTCGGTCGGTGGAGGGG
ATCCCTGCCTCTCGTCCTGATAAAGGTAGGCGCGCATGGGTGAAACGACG
ATCAAATAAAGGAGAAACAGGCCGTCGACGTCAAGACAGCTACTTCTTCC
ATGTCAAATCCCTGCGCCAACGCGATTGGCCCACACACGCCCCTCCTACG
CCGCGACTCTTCCTCGGCCTCGAATCCTGCCTTGGCGACCGCGGTTCGCT
TTCGTCCCGCTCCTGCTCCACGGTCATGCGTCTCATCTCTTGCTGATACC
ACCGTTGTTCCTGCTTGATCTCGCACTCCAACCGCCCGCTTCTCCTGGTG
CAATCGCCGGGCCTCCTGGTGCTCTTGCCACATGCGGGTCATCGTCGAGC
CATGGCGCTTCTGTAACACGCGCCCCGTGGCGCCCCTTTTCTCTCCCCTT
TT back to topprotein sequence of jgi.p|Nanoce1779_2|596752 >mRNA_6910-protein ID=mRNA_6910-protein|Name=jgi.p|Nanoce1779_2|596752|organism=Nannochloropsis oceanica|type=polypeptide|length=211bp
MCRLVGCRHQSRNQRHDRINCLVLPMAALLSSIEATSGRLQGRDDALHLS
ACFMMISCLFPLAPREASFVSPIKIVQILPLQSLQRVSSCETINGANATV
RFNFWRSHCITFMNCSLLSCLPLFLFWWCEGRICYFCCDSRRHPSGLIVK
FLSVSSLCIKSLVWCFAFRPGGRLIKGGGGLAPCKCRTKTLWMRPWTCNY
SYVRVLHPYL* back to topmRNA from alignment at scaffold_17:408336..409894+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6910 ID=mRNA_6910|Name=jgi.p|Nanoce1779_2|596752|organism=Nannochloropsis oceanica|type=mRNA|length=1559bp|location=Sequence derived from alignment at scaffold_17:408336..409894+ (Nannochloropsis oceanica)
AAAATATGCGTGAAAAGCGTGGGGAGGGGTGGATGATTCCGGTCGTGTGT
CTGTTGCCCCGCCCCCTGCTTGTTGTTGTTGAGCTTTGCGAATGCAATGT
GCCGCTTGGTGGGTTGCCGCCACCAGTCCCGAAACCAGCGCCACGATCGT
ATAAATTGCCTTGTGCTACCAATGGCTGCACTGCTCTCCAGCATTGAGGC
GACCAGTGGCAGGCTACAGGGCAGAGACGATGCCCTCCATCTTTCTGCCT
GTTTTATGATGATTTCTTGTCTCTTTCCTCTCGCTCCTCGAGAGGCCTCG
TTTGTCTCGCCCATAAAAATTGTTCAAATACTACCATTACAATCATTGCA
AAGGGTTTCCTCATGTGAAACAATCAATGGAGCAAACGCGACTGTACGTT
TTAATTTCTGGCGGTCGCATTGTATCACTTTCATGAATTGCTCGCTGCTC
AGCTGTCTCCCTTTATTTCTTTTTTGGTGGTGCGAGGGTCGAATTTGTTA
TTTCTGTTGTGATTCCCGGAGGCATCCGTCGGGTCTCATAGTCAAGTTTT
TGTCTGTTTCAAGTTTGTGCATAAAGTCTCTAGTATGGTGCTTTGCCTTT
CGTCCGGGGGGGAGGTTGATAAAGGGGGGGGGAGGACTGGCACCATGCAA
ATGTCGGACGAAAACTTTATGGATGAGGCCCTGGACATGTAATTATTCAT
ACGTTCGAGTACTTCATCCATATCTGTGATAACACGTCACTTTGTACATT
AAAATCGAGTCCTGACTAAGTTGTGAGTGCATGTCGTCCGTCCATGATGA
AATCCACGCCCTAACGAAGTTCATGCTTGAACACAGGACAGGTTGAGTGG
TGAATCAAGTAAACAAAGTGCTACTCGTCCAACGTGCAGACAGGTGATCG
ATTGGTGTGTTTCGGGGCCATCCTGACGTTTAGAATTCGCTTTTGACACC
TGCTCTCGATTTTTTTTTGTTCTTGCTGTGTTTCTCGGTCGGTGGAGGGG
ATCCCTAGGATGGAGGGCGATCGGTTGGATGGGAGTGTCGTGAATGGGTT
GGTGTTTGTAGGTTGTCAGCCGAGGTGGCATGAATCGATGGGCGTGTCGA
TGTAGTTTAGGACCAAAATTATCATGCGCCATACTACCACTCGTCTCCCC
TCAGGTCTTACCTGCCTCTCGTCCTGATAAAGGTAGGCGCGCATGGGTGA
AACGACGATCAAATAAAGGAGAAACAGGCCGTCGACGTCAAGACAGCTAC
TTCTTCCATGTCAAATCCCTGCGCCAACGCGATTGGCCCACACACGCCCC
TCCTACGCCGCGACTCTTCCTCGGCCTCGAATCCTGCCTTGGCGACCGCG
GTTCGCTTTCGTCCCGCTCCTGCTCCACGGTCATGCGTCTCATCTCTTGC
TGATACCACCGTTGTTCCTGCTTGATCTCGCACTCCAACCGCCCGCTTCT
CCTGGTGCAATCGCCGGGCCTCCTGGTGCTCTTGCCACATGCGGGTCATC
GTCGAGCCATGGCGCTTCTGTAACACGCGCCCCGTGGCGCCCCTTTTCTC
TCCCCTTTT back to topCoding sequence (CDS) from alignment at scaffold_17:408336..409894+ >mRNA_6910 ID=mRNA_6910|Name=jgi.p|Nanoce1779_2|596752|organism=Nannochloropsis oceanica|type=CDS|length=633bp|location=Sequence derived from alignment at scaffold_17:408336..409894+ (Nannochloropsis oceanica)
ATGTGCCGCTTGGTGGGTTGCCGCCACCAGTCCCGAAACCAGCGCCACGA
TCGTATAAATTGCCTTGTGCTACCAATGGCTGCACTGCTCTCCAGCATTG
AGGCGACCAGTGGCAGGCTACAGGGCAGAGACGATGCCCTCCATCTTTCT
GCCTGTTTTATGATGATTTCTTGTCTCTTTCCTCTCGCTCCTCGAGAGGC
CTCGTTTGTCTCGCCCATAAAAATTGTTCAAATACTACCATTACAATCAT
TGCAAAGGGTTTCCTCATGTGAAACAATCAATGGAGCAAACGCGACTGTA
CGTTTTAATTTCTGGCGGTCGCATTGTATCACTTTCATGAATTGCTCGCT
GCTCAGCTGTCTCCCTTTATTTCTTTTTTGGTGGTGCGAGGGTCGAATTT
GTTATTTCTGTTGTGATTCCCGGAGGCATCCGTCGGGTCTCATAGTCAAG
TTTTTGTCTGTTTCAAGTTTGTGCATAAAGTCTCTAGTATGGTGCTTTGC
CTTTCGTCCGGGGGGGAGGTTGATAAAGGGGGGGGGAGGACTGGCACCAT
GCAAATGTCGGACGAAAACTTTATGGATGAGGCCCTGGACATGTAATTAT
TCATACGTTCGAGTACTTCATCCATATCTGTGA back to top
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