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Properties
| Property Name | Value |
|---|
| TranscriptId | 116381 |
| Track | FilteredModels2 |
| ProteinId | 116295 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:387682..389102 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6902 ID=mRNA_6902|Name=jgi.p|Nanoce1779_2|116295|organism=Nannochloropsis oceanica|type=mRNA|length=1080bp
ATGGCCTCCCCCGTCCATCAATCCACACGAGCATATGGGCTGAAAGCAAG
AGGGGAGGCACGAAGCATGTTCAAGAATGTAGGGTGCAGTTGGAGATTCT
CTGCGATGGTAATTTTCACTTTCATATAACATAGGCGCGGGTTTCGCCAC
CGCTTCTGGCCCAGATCTAGACACCCTCCTTGCCTTCTAGTCTCAGCCAT
CGTCCGCGTTGAACCCTTCCAGCATCACTACCCCTCTACACGCAAGGAAT
GCATTTCGCCGCCTGGAACAAATCGACTTATGTGGACCTTCTTGTGCTTA
CCATGAAGGTCTTGGTGGCCGCCGCGTTGATCGCACATGCCCACCATATC
CGAAGACACCTCCATCCCGAGCCCGTCTATGGCGTGCTCAATAAAGCAGA
CTACACTTACAGTGTGCAGGAAACGGCAGATATTCTCGTCACAGTCAGCT
GGACGGCGGGGGGTTATGTCCTGATTAGCAGCGCGATTGGTTTGCTTGGA
CGGTTTCTTCGTGCTGCTCCTTTATATGGCGTGTATTATTGTGCGAATGT
GTTTGGGTTTGGTGTGTGTCTTGCTGCGGCAATCGTTCCAGCTCTGTGGG
GGACGAGCAAAAGTGGGTATTGTCTCGCGGCGGAGGATTCCTGTATGTCC
GTAGAAGATTTGTCAGAGTGTCCTTATCCTGTGACATTAGCGAGTGAAAG
CAGAGTGGGGCGTTTGGCGGAGGATGAAACTGATTTTGTTGCTGCTGCTG
CTTCCGGGGAAGGGTTGACGAGTAGCAGCCCGTGTTGTTACTTACCGGAA
TTGATTCGGTTTTGTGGGAGTTTCCTGGGGGCTGTGTACACACAAACAAT
CATCGCGGTGGTGCTGTTGGCATTGGTCATGACGCAGAGCATGGTGAGCT
GTTGCTATTTGTGCTGTGACTGCGACCGACTACTCACGCTCTCCCACACA
TCCAGCTTGGACGGCGAAAGGCCGCTTGCCAGCCATGACGGACCTTACCG
CATTTACCATGCCTGAGGCTCTTCCAAGGAGAAGCCGAGCCCTCACTACC
CGGAATGATATAGAGAGGAAGGAGGGAGGG back to topprotein sequence of jgi.p|Nanoce1779_2|116295 >mRNA_6902-protein ID=mRNA_6902-protein|Name=jgi.p|Nanoce1779_2|116295|organism=Nannochloropsis oceanica|type=polypeptide|length=256bp
MHFAAWNKSTYVDLLVLTMKVLVAAALIAHAHHIRRHLHPEPVYGVLNKA
DYTYSVQETADILVTVSWTAGGYVLISSAIGLLGRFLRAAPLYGVYYCAN
VFGFGVCLAAAIVPALWGTSKSGYCLAAEDSCMSVEDLSECPYPVTLASE
SRVGRLAEDETDFVAAAASGEGLTSSSPCCYLPELIRFCGSFLGAVYTQT
IIAVVLLALVMTQSMVSCCYLCCDCDRLLTLSHTSSLDGERPLASHDGPY
RIYHA* back to topmRNA from alignment at scaffold_17:387682..389102- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6902 ID=mRNA_6902|Name=jgi.p|Nanoce1779_2|116295|organism=Nannochloropsis oceanica|type=mRNA|length=1421bp|location=Sequence derived from alignment at scaffold_17:387682..389102- (Nannochloropsis oceanica)
ATGGCCTCCCCCGTCCATCAATCCACACGAGCATATGGGCTGAAAGCAAG
AGGGGAGGCACGAAGCATGTTCAAGAATGTAGGGTGCAGTTGGAGATTCT
CTGCGATGGTAATTTTCACTTTCATATAACATAGGCGCGGGTTTCGCCAC
CGCTTCTGGCCCAGATCTAGACACCCTCCTTGCCTTCTAGTCTCAGCCAT
CGTCCGCGTTGAACCCTTCCAGCATCACTACCCCTCTACACGCAAGGAAT
GCATTTCGCCGCCTGGAACAAATCGACTTATGTGGACCTTCTTGTGCTTA
CCATGAAGGTCTTGGTGGCCGCCGCGTTGATCGCACATGCCCACCATATC
CGAAGACACCTCCATCCCGAGCCCGTCTATGGCGTGCTCAATAAAGCAGA
CTACACTTACAGTGTGCAGGAAACGGCAGATATTCTCGTCACAGTCAGCT
GGACGGCGGGGGGTTATGTCCTGATTAGCAGCGCGATTGGTTTGCTTGGA
CGGTTTCTTCGTGCTGCTCCTTTATATGGCGTGTATTATTGTGCGAATGT
GTTTGGGTTTGGTGTGTGTCTTGCTGCGGCAATCGTTCCAGCTCTGTGGG
GGACGAGCAAAAGTGGGTATTGTCTCGCGGCGGAGGATTCCTGTATGTCC
GTAGAAGATTTGTCAGAGTGTCCTTATCCTGTGACATTAGCGAGTGAAAG
CAGAGTGGGGCGTTTGGCGGAGGATGAAACTGATTTTGTTGCTGCTGCTG
CTTCCGGGGAAGGGTTGACGAGTAGCAGCCCGTGTTGTTACTTACCGGAA
TTGATTCGGTTTTGTGGGAGTTTCCTGGGGGCTGTGTACACACAAACAAT
CATCGCGGTGGTGCTGTTGGCATTGGTCATGACGCAGAGCATGGTGAGCT
GTTGCTATTTGTGCTGTGACTGCGACCGACGTAAGTACTCCCTCCCTCCT
TCCCTCCCTTCCTCTCTCCTTTTCCCTTTACGCGCTCTTCTCTGTTCTGT
CTGAATGTGGGGCAACCAGGGTTCCCTCTCTTACTGTCCACACTTTTCGC
ATCGCTACTCTTGAGGTCTCTCTCCCATTCCTCCTTTCCCTAGAAAGGCC
CGTCTTATACTCACGAACCAAAACACAAATGTTTTAATTCGTTTCCTCAC
GTACCAGTACTCACGCTCTCCCACACATCCAGCTTGGACGGCGAAAGGCC
GCTTGCCAGCCATGACGGACCTTACCGCATTTACCATGCCTGAGGCTCTT
CCAAGGAGAAGCCGAGCCCTCACTACCCGGAATGATATAGAGAGGAAGGA
GGTAGCGGAGGAAGGAAACGGAACAATGAAGGAGGGGGAGGAGCAGGAGA
GGAAGGCCAGAGAGGGAGGAGGAAGGGGCAGGGACGAGGAGAAAGGGAGT
AAGGGAAGGAAGGAGGGAGGG back to topCoding sequence (CDS) from alignment at scaffold_17:387682..389102- >mRNA_6902 ID=mRNA_6902|Name=jgi.p|Nanoce1779_2|116295|organism=Nannochloropsis oceanica|type=CDS|length=1536bp|location=Sequence derived from alignment at scaffold_17:387682..389102- (Nannochloropsis oceanica)
TACTCACGCTCTCCCACACATCCAGCTTGGACGGCGAAAGGCCGCTTGCC
AGCCATGACGGACCTTACCGCATTTACCATGCCTGAATGCATTTCGCCGC
CTGGAACAAATCGACTTATGTGGACCTTCTTGTGCTTACCATGAAGGTCT
TGGTGGCCGCCGCGTTGATCGCACATGCCCACCATATCCGAAGACACCTC
CATCCCGAGCCCGTCTATGGCGTGCTCAATAAAGCAGACTACACTTACAG
TGTGCAGGAAACGGCAGATATTCTCGTCACAGTCAGCTGGACGGCGGGGG
GTTATGTCCTGATTAGCAGCGCGATTGGTTTGCTTGGACGGTTTCTTCGT
GCTGCTCCTTTATATGGCGTGTATTATTGTGCGAATGTGTTTGGGTTTGG
TGTGTGTCTTGCTGCGGCAATCGTTCCAGCTCTGTGGGGGACGAGCAAAA
GTGGGTATTGTCTCGCGGCGGAGGATTCCTGTATGTCCGTAGAAGATTTG
TCAGAGTGTCCTTATCCTGTGACATTAGCGAGTGAAAGCAGAGTGGGGCG
TTTGGCGGAGGATGAAACTGATTTTGTTGCTGCTGCTGCTTCCGGGGAAG
GGTTGACGAGTAGCAGCCCGTGTTGTTACTTACCGGAATTGATTCGGTTT
TGTGGGAGTTTCCTGGGGGCTGTGTACACACAAACAATCATCGCGGTGGT
GCTGTTGGCATTGGTCATGACGCAGAGCATGGTGAGCTGTTGCTATTTGT
GCTGTGACTGCGACCGACTACTCACGCTCTCCCACACATCCAGCTTGGAC
GGCGAAAGGCCGCTTGCCAGCCATGACGGACCTTACCGCATTTACCATGC
CTGAATGCATTTCGCCGCCTGGAACAAATCGACTTATGTGGACCTTCTTG
TGCTTACCATGAAGGTCTTGGTGGCCGCCGCGTTGATCGCACATGCCCAC
CATATCCGAAGACACCTCCATCCCGAGCCCGTCTATGGCGTGCTCAATAA
AGCAGACTACACTTACAGTGTGCAGGAAACGGCAGATATTCTCGTCACAG
TCAGCTGGACGGCGGGGGGTTATGTCCTGATTAGCAGCGCGATTGGTTTG
CTTGGACGGTTTCTTCGTGCTGCTCCTTTATATGGCGTGTATTATTGTGC
GAATGTGTTTGGGTTTGGTGTGTGTCTTGCTGCGGCAATCGTTCCAGCTC
TGTGGGGGACGAGCAAAAGTGGGTATTGTCTCGCGGCGGAGGATTCCTGT
ATGTCCGTAGAAGATTTGTCAGAGTGTCCTTATCCTGTGACATTAGCGAG
TGAAAGCAGAGTGGGGCGTTTGGCGGAGGATGAAACTGATTTTGTTGCTG
CTGCTGCTTCCGGGGAAGGGTTGACGAGTAGCAGCCCGTGTTGTTACTTA
CCGGAATTGATTCGGTTTTGTGGGAGTTTCCTGGGGGCTGTGTACACACA
AACAATCATCGCGGTGGTGCTGTTGGCATTGGTCATGACGCAGAGCATGG
TGAGCTGTTGCTATTTGTGCTGTGACTGCGACCGAC back to top
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