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Properties
| Property Name | Value |
|---|
| TranscriptId | 672398 |
| Track | FilteredModels2 |
| ProteinId | 672312 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:299171..300414 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6869 ID=mRNA_6869|Name=jgi.p|Nanoce1779_2|672312|organism=Nannochloropsis oceanica|type=mRNA|length=1097bp
GCAGCATGAGTGAGATGGTACAGGAACCCAAAAGCATTGCTTTTGCCACA
TTTCTGACCACACACGTAATTGTCCCCAAATAGGACTATGGGTACGACCA
CCAGTAGCCCCAGTACCGCTTCCAGCAAGTATGGAGCAACACTGTTTACT
GAGCCTTTGGAATTTACTCCAACAACTCATGCCTTAGCAACGAACTCCCC
TCCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTCACCACCACCACAAGAGC
CATCACCACCACTCCGCAACTCGTCCATGCCTTCCTACTGCCTCTTAGTC
ATATCCTCGATAGGTGTCATGGGCTGTGGTGCGGCTGCGGGCATGTACCG
GGCCAAACACAGCACCGAGGGGACTGAAGACTGGCGGAAGCTGCCTCCAA
GTCAGCAGGTCAAACACTGGAAAGTAGACCCAAACAGCCACTTTAATCCC
ACCCGCTTCGCGGCCAAGGCCCTTGCGGTGGGTACTGTTTTGTGCCTGAG
CGCTACGGGTGTTGCTGCTTTCGCGTTGGGACGTGTATTGAACATTAGCT
CCATCGATGAGTTCGTCAGTAAAATGCGCGTGTGGGCGCCCGCGAAAAAA
AGGGAGTTGGAGGCATGGTTACATATCAAACCAAACCCAGTGGTGGAGGT
GGAGAGGAGGCATGTGGAGAAAATGACGTATGACGAGGAGATAGAGTATT
GGGGGGATATCTTGATGAAGGAGGAGAGGGAGAAGAAGGTGAGAGAGATA
GCAGAAGCAGGAGCAGTGGGTGTTGCAGGAGGGGTTCGCTCTATCAAAGA
AGGGAGGAAGCAGCAGCAACAGCAGCAGCAGTGGTGGAGATGGCCTTGGC
GGACGAAAGGATGATTTGAAAAAAAGGGGCGACGGATTAGTAGGTTTGTT
TATAGATATGTGTGAATACAGGAAAAGGAGACGAAAAGGCTTAGGGGAGA
GTTCTCAATGGACGTAGTCCTATGTAGGCAAAACAATGACAAATGAAATT
AAAGTTATGAGAGAATCAAAGGACAGATAGAAAGATAGAAAGAGAGATCA
TAGGATGCATTAATGTTTCCAATGCCTTGAAACGAGATCTTCATCGT back to topprotein sequence of jgi.p|Nanoce1779_2|672312 >mRNA_6869-protein ID=mRNA_6869-protein|Name=jgi.p|Nanoce1779_2|672312|organism=Nannochloropsis oceanica|type=polypeptide|length=259bp
MGTTTSSPSTASSKYGATLFTEPLEFTPTTHALATNSPPSSSSSSSSSSP
PPQEPSPPLRNSSMPSYCLLVISSIGVMGCGAAAGMYRAKHSTEGTEDWR
KLPPSQQVKHWKVDPNSHFNPTRFAAKALAVGTVLCLSATGVAAFALGRV
LNISSIDEFVSKMRVWAPAKKRELEAWLHIKPNPVVEVERRHVEKMTYDE
EIEYWGDILMKEEREKKVREIAEAGAVGVAGGVRSIKEGRKQQQQQQQWW
RWPWRTKG* back to topmRNA from alignment at scaffold_17:299171..300414+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6869 ID=mRNA_6869|Name=jgi.p|Nanoce1779_2|672312|organism=Nannochloropsis oceanica|type=mRNA|length=1244bp|location=Sequence derived from alignment at scaffold_17:299171..300414+ (Nannochloropsis oceanica)
GCAGCATGAGTGAGATGGTACAGGAACCCAAAAGCATTGCTTTTGCCACA
TTTCTGACCACACACGTAATTGTCCCCAAATAGGACTATGGGTACGACCA
CCAGTAGCCCCAGTACCGCTTCCAGCAAGTATGGAGCAACACTGTTTACT
GAGCCTTTGGAATTTACTCCAACAACTCATGCCTTAGCAACGAACTCCCC
TCCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTCACCACCACCACAAGAGC
CATCACCACCACTCCGCAACTCGTCCATGCCTTCCTACTGCCTCTTAGTC
ATATCCTCGATAGGTGTCATGGGCTGTGGTGCGGCTGCGGGCATGTACCG
GGCCAAACACAGCACCGAGGGGACTGAAGACTGGCGGAAGCTGCCTCCAA
GTCAGCAGGTCAAACACTGGAAAGTGTACGTATTTTGCCAAGGAAGATGT
GAGAGTAGGGTTAGAGAAAAGAAAGGAGAAAAGGGTTGAAAAGAAACGAG
ACGAATTTTCCATTCTCGTAGCCTGTCCTTGAATTTACATATCACCCATT
CAGCCTCCCTTCCCATACACAGAGACCCAAACAGCCACTTTAATCCCACC
CGCTTCGCGGCCAAGGCCCTTGCGGTGGGTACTGTTTTGTGCCTGAGCGC
TACGGGTGTTGCTGCTTTCGCGTTGGGACGTGTATTGAACATTAGCTCCA
TCGATGAGTTCGTCAGTAAAATGCGCGTGTGGGCGCCCGCGAAAAAAAGG
GAGTTGGAGGCATGGTTACATATCAAACCAAACCCAGTGGTGGAGGTGGA
GAGGAGGCATGTGGAGAAAATGACGTATGACGAGGAGATAGAGTATTGGG
GGGATATCTTGATGAAGGAGGAGAGGGAGAAGAAGGTGAGAGAGATAGCA
GAAGCAGGAGCAGTGGGTGTTGCAGGAGGGGTTCGCTCTATCAAAGAAGG
GAGGAAGCAGCAGCAACAGCAGCAGCAGTGGTGGAGATGGCCTTGGCGGA
CGAAAGGATGATTTGAAAAAAAGGGGCGACGGATTAGTAGGTTTGTTTAT
AGATATGTGTGAATACAGGAAAAGGAGACGAAAAGGCTTAGGGGAGAGTT
CTCAATGGACGTAGTCCTATGTAGGCAAAACAATGACAAATGAAATTAAA
GTTATGAGAGAATCAAAGGACAGATAGAAAGATAGAAAGAGAGATCATAG
GATGCATTAATGTTTCCAATGCCTTGAAACGAGATCTTCATCGT back to topCoding sequence (CDS) from alignment at scaffold_17:299171..300414+ >mRNA_6869 ID=mRNA_6869|Name=jgi.p|Nanoce1779_2|672312|organism=Nannochloropsis oceanica|type=CDS|length=1554bp|location=Sequence derived from alignment at scaffold_17:299171..300414+ (Nannochloropsis oceanica)
ATGGGTACGACCACCAGTAGCCCCAGTACCGCTTCCAGCAAGTATGGAGC
AACACTGTTTACTGAGCCTTTGGAATTTACTCCAACAACTCATGCCTTAG
CAACGAACTCCCCTCCCTCCTCCTCGTCCTCCTCCTCCTCCTCCTCACCA
CCACCACAAGAGCCATCACCACCACTCCGCAACTCGTCCATGCCTTCCTA
CTGCCTCTTAGTCATATCCTCGATAGGTGTCATGGGCTGTGGTGCGGCTG
CGGGCATGTACCGGGCCAAACACAGCACCGAGGGGACTGAAGACTGGCGG
AAGCTGCCTCCAAGTCAGCAGGTCAAACACTGGAAAGTAGACCCAAACAG
CCACTTTAATCCCACCCGCTTCGCGGCCAAGGCCCTTGCGGTGGGTACTG
TTTTGTGCCTGAGCGCTACGGGTGTTGCTGCTTTCGCGTTGGGACGTGTA
TTGAACATTAGCTCCATCGATGAGTTCGTCAGTAAAATGCGCGTGTGGGC
GCCCGCGAAAAAAAGGGAGTTGGAGGCATGGTTACATATCAAACCAAACC
CAGTGGTGGAGGTGGAGAGGAGGCATGTGGAGAAAATGACGTATGACGAG
GAGATAGAGTATTGGGGGGATATCTTGATGAAGGAGGAGAGGGAGAAGAA
GGTGAGAGAGATAGCAGAAGCAGGAGCAGTGGGTGTTGCAGGAGGGGTTC
GCTCTATCAAAGAAGGGAGGAAGCAGCAGCAACAGCAGCAGCAGTGGTGG
AGATGGCCTTGGCGGACGAAAGGATGAATGGGTACGACCACCAGTAGCCC
CAGTACCGCTTCCAGCAAGTATGGAGCAACACTGTTTACTGAGCCTTTGG
AATTTACTCCAACAACTCATGCCTTAGCAACGAACTCCCCTCCCTCCTCC
TCGTCCTCCTCCTCCTCCTCCTCACCACCACCACAAGAGCCATCACCACC
ACTCCGCAACTCGTCCATGCCTTCCTACTGCCTCTTAGTCATATCCTCGA
TAGGTGTCATGGGCTGTGGTGCGGCTGCGGGCATGTACCGGGCCAAACAC
AGCACCGAGGGGACTGAAGACTGGCGGAAGCTGCCTCCAAGTCAGCAGGT
CAAACACTGGAAAGTAGACCCAAACAGCCACTTTAATCCCACCCGCTTCG
CGGCCAAGGCCCTTGCGGTGGGTACTGTTTTGTGCCTGAGCGCTACGGGT
GTTGCTGCTTTCGCGTTGGGACGTGTATTGAACATTAGCTCCATCGATGA
GTTCGTCAGTAAAATGCGCGTGTGGGCGCCCGCGAAAAAAAGGGAGTTGG
AGGCATGGTTACATATCAAACCAAACCCAGTGGTGGAGGTGGAGAGGAGG
CATGTGGAGAAAATGACGTATGACGAGGAGATAGAGTATTGGGGGGATAT
CTTGATGAAGGAGGAGAGGGAGAAGAAGGTGAGAGAGATAGCAGAAGCAG
GAGCAGTGGGTGTTGCAGGAGGGGTTCGCTCTATCAAAGAAGGGAGGAAG
CAGCAGCAACAGCAGCAGCAGTGGTGGAGATGGCCTTGGCGGACGAAAGG
ATGA back to top
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