Properties
| Property Name | Value |
|---|
| TranscriptId | 596603 |
| Track | FilteredModels2 |
| ProteinId | 596517 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:242479..243334 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6845 ID=mRNA_6845|Name=jgi.p|Nanoce1779_2|596517|organism=Nannochloropsis oceanica|type=mRNA|length=856bp
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTTTCTTCCGACCAAG
GATGAGGGTGAAGGAGAGGAAAGGAAGGTATGCGTCCCTCCCCCTACCTC
ACGACCTCGCCCTTCCGACTGCCCATCCTCCAGCGGGGAAGCCGATGACG
ACCACCGCAAGTGCAACTCTTCCTCCCTCCCACCCTTCCTTCCTCCCTCA
TCCAATTTCTCCTCCTCCTCCCGCTCACGCTGCTCCTGACGTCGACGAAT
TTCCTCCTTTTCCAAAATCTGTTCTCGCAACGCCGCGGCATATCGCGCCT
TCATTTCAAACGCCGTCCTCTCCCTTGCTGCTTCCCCCTCTTTCTCCCCC
CCTCCCTCCCACTCTCTGCCCTCCATACGCAAGAGGCGAGAGGTCGGCGT
GGACACCATGGGCGAAGAGGATGGGTTGGAGGACGGAACCGAGGACGGGG
ACGGAAGAGAAGAGGATGAGATGCCGACACTCTTCTTCCTCCTTCCCTCA
ATAGCAGGAAACAGATCTCCCCCCCTCTCCTCTCTCTCCTTCTCCCCCTC
CTCCAAGAGTACGCCAATCCTTTCCCCTCTCCTCAAGAGCCTTCGGACAC
TCGGGGGGGACAAAACTAACATGCCCTCCAACTCTAACTGTCGTCTCTTC
TCCCTCAATTGCTCGTCTAGGGCCAACGCGTAGGCAGTTTTCTGCTCCTG
CTTCGCTCGAGCCTGCTCCTCCTCCCCACGAGGGCCCGTGTGCATTGAGT
GGAGCCCACCGTGACGACGACGATAGTGAGAAGGACAGGCTTCTTGTCGC
TGTTGCTGCTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTG
TTGTTG back to topprotein sequence of jgi.p|Nanoce1779_2|596517 >mRNA_6845-protein ID=mRNA_6845-protein|Name=jgi.p|Nanoce1779_2|596517|organism=Nannochloropsis oceanica|type=polypeptide|length=151bp
MRVKERKGRYASLPLPHDLALPTAHPPAGKPMTTTASATLPPSHPSFLPH
PISPPPPAHAAPDVDEFPPFPKSVLATPRHIAPSFQTPSSPLLLPPLSPP
LPPTLCPPYARGERSAWTPWAKRMGWRTEPRTGTEEKRMRCRHSSSSFPQ
* back to topmRNA from alignment at scaffold_17:242479..243334- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6845 ID=mRNA_6845|Name=jgi.p|Nanoce1779_2|596517|organism=Nannochloropsis oceanica|type=mRNA|length=856bp|location=Sequence derived from alignment at scaffold_17:242479..243334- (Nannochloropsis oceanica)
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTTTCTTCCGACCAAG
GATGAGGGTGAAGGAGAGGAAAGGAAGGTATGCGTCCCTCCCCCTACCTC
ACGACCTCGCCCTTCCGACTGCCCATCCTCCAGCGGGGAAGCCGATGACG
ACCACCGCAAGTGCAACTCTTCCTCCCTCCCACCCTTCCTTCCTCCCTCA
TCCAATTTCTCCTCCTCCTCCCGCTCACGCTGCTCCTGACGTCGACGAAT
TTCCTCCTTTTCCAAAATCTGTTCTCGCAACGCCGCGGCATATCGCGCCT
TCATTTCAAACGCCGTCCTCTCCCTTGCTGCTTCCCCCTCTTTCTCCCCC
CCTCCCTCCCACTCTCTGCCCTCCATACGCAAGAGGCGAGAGGTCGGCGT
GGACACCATGGGCGAAGAGGATGGGTTGGAGGACGGAACCGAGGACGGGG
ACGGAAGAGAAGAGGATGAGATGCCGACACTCTTCTTCCTCCTTCCCTCA
ATAGCAGGAAACAGATCTCCCCCCCTCTCCTCTCTCTCCTTCTCCCCCTC
CTCCAAGAGTACGCCAATCCTTTCCCCTCTCCTCAAGAGCCTTCGGACAC
TCGGGGGGGACAAAACTAACATGCCCTCCAACTCTAACTGTCGTCTCTTC
TCCCTCAATTGCTCGTCTAGGGCCAACGCGTAGGCAGTTTTCTGCTCCTG
CTTCGCTCGAGCCTGCTCCTCCTCCCCACGAGGGCCCGTGTGCATTGAGT
GGAGCCCACCGTGACGACGACGATAGTGAGAAGGACAGGCTTCTTGTCGC
TGTTGCTGCTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTGTTGCTG
TTGTTG back to topCoding sequence (CDS) from alignment at scaffold_17:242479..243334- >mRNA_6845 ID=mRNA_6845|Name=jgi.p|Nanoce1779_2|596517|organism=Nannochloropsis oceanica|type=CDS|length=453bp|location=Sequence derived from alignment at scaffold_17:242479..243334- (Nannochloropsis oceanica)
ATGAGGGTGAAGGAGAGGAAAGGAAGGTATGCGTCCCTCCCCCTACCTCA
CGACCTCGCCCTTCCGACTGCCCATCCTCCAGCGGGGAAGCCGATGACGA
CCACCGCAAGTGCAACTCTTCCTCCCTCCCACCCTTCCTTCCTCCCTCAT
CCAATTTCTCCTCCTCCTCCCGCTCACGCTGCTCCTGACGTCGACGAATT
TCCTCCTTTTCCAAAATCTGTTCTCGCAACGCCGCGGCATATCGCGCCTT
CATTTCAAACGCCGTCCTCTCCCTTGCTGCTTCCCCCTCTTTCTCCCCCC
CTCCCTCCCACTCTCTGCCCTCCATACGCAAGAGGCGAGAGGTCGGCGTG
GACACCATGGGCGAAGAGGATGGGTTGGAGGACGGAACCGAGGACGGGGA
CGGAAGAGAAGAGGATGAGATGCCGACACTCTTCTTCCTCCTTCCCTCAA
TAG back to top
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