Properties
| Property Name | Value |
|---|
| TranscriptId | 596340 |
| Track | FilteredModels2 |
| ProteinId | 596254 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:45941..47424 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6765 ID=mRNA_6765|Name=jgi.p|Nanoce1779_2|596254|organism=Nannochloropsis oceanica|type=mRNA|length=1484bp
ACAGGAGTGTAGGAGAGCGTCCTCTTCTAGGGTTAAGTGCATGTGGAGGA
CAGGGCTTGGCATTTTGATGTTTTGGGCCCGCTTTTCCAAGGCCTCCTTC
ATTGCCTCACCGTACACTGTCGACAGCATCAAAGCTATGGCCTCCCGCCG
CACTCCGCTTGGCATCGCGCACACCTTCAGCGGCTTGGGGCTGGACCGCA
GCCGCGTGGAGACGGAGCTGAAAGAGGTGGCGGCCTTTGAAAGTGCACTG
AAAACCGATGGCGCGGGTACGTGGTTAAGGACGAGAGGTCGGCAGAGCCG
GTGTGTGGGTTGTACTAGCGCACACTTTATTCTACGCATACCGCCTTTCT
AGCCCGACAGCACACCGATAAACAAATCCATTTTAATCTGAAGCTGATAG
GCACACAAAATCGAAAGCCCACCAATCGTCCGCATCATCCACGTTTTATG
CCTCCCCATCTCCGTTTCCCTTCCTTCCGCAGCCTTTGCCTTGTTCCACG
GAACGTCAGCCCTAATCACGAAAGAGAGACAAACCAAGATTGTCTATCAG
ACTGGCGACATGCTCCAAAAGCTTTATGGAATTTCCATCGAACAACTGCA
GCCAACCAACAAAAGCAGCAGACTAACCACCAGCGGTAATAGCTCTTCTG
CACCATACTTTCCGTGTGTCGCGCTCGGTGCATCCGTGAGCGGATGGGCT
TTCGCCGTAGATGTCTCCAAGCGATCCAAAGAGGATGTGGAGAGCAAGGC
AGAGGCAGCTGGAGAAGTCGCCGTCCAGTTTGAACCCGTACGGGCGCTGT
TAGCAGTCCTCACGGAAGAGGACATTGCAGTGGCAGGGCTGGGTGCGTCT
ATTTTGGCCTGGCACCGTCAGCACCAGCACTGTGGAGTGTGTGGCAGTCC
AATGATAGCGGTGGAAGGAGGAGGGCGTCGCGCCTGTACAAGCTGCCGAA
ATCGCGCGTATCCGCGCGTTGATCCCGTCGTAATTGCTTTGGTGACGGAC
CCTGCGAGGGATATGGTGTTGTTAGGACGTCAGAGAGTGTATCGGCCCGG
GATGTTCTCATGTTTAGCTGGGTACGTGAGTCAGTGCGAAAGCTTGGAGG
AGGCTGTACGAAGAGAGGTAAAGGAAGAATCAGGAATCAGCGTGGGGGAT
GTAATGTATCACAGCTCGCAGCCCTGGCCGATTGGGCGGGGGGCGTCGTG
TCAGATAATGGTGGGCTATATCGCGACTGCTACCAGTATGGATATCTCCA
TGGACACGGACGAACTGGAGGATTGCCGGTGGTTTTCTCGGGCCGAAGTG
GCGGGCGCAAAGGAGCTGGTTGTGTCCGCAGCGTTGGACCCAACGGGGGA
AAACCCGGGTGGGTTGAGTATTCCTGGGCCTTACGCGATAGCGCATCATT
TGATCAAGCACTGGCTGTTGACGACGACGCCGCAAGAAGCGTCAGGAGGA
CGTAATAAATTATGAAAAATGTATTTGGGCCGAG back to topprotein sequence of jgi.p|Nanoce1779_2|596254 >mRNA_6765-protein ID=mRNA_6765-protein|Name=jgi.p|Nanoce1779_2|596254|organism=Nannochloropsis oceanica|type=polypeptide|length=302bp
MLQKLYGISIEQLQPTNKSSRLTTSGNSSSAPYFPCVALGASVSGWAFAV
DVSKRSKEDVESKAEAAGEVAVQFEPVRALLAVLTEEDIAVAGLGASILA
WHRQHQHCGVCGSPMIAVEGGGRRACTSCRNRAYPRVDPVVIALVTDPAR
DMVLLGRQRVYRPGMFSCLAGYVSQCESLEEAVRREVKEESGISVGDVMY
HSSQPWPIGRGASCQIMVGYIATATSMDISMDTDELEDCRWFSRAEVAGA
KELVVSAALDPTGENPGGLSIPGPYAIAHHLIKHWLLTTTPQEASGGRNK
L* back to topmRNA from alignment at scaffold_17:45941..47424- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6765 ID=mRNA_6765|Name=jgi.p|Nanoce1779_2|596254|organism=Nannochloropsis oceanica|type=mRNA|length=1484bp|location=Sequence derived from alignment at scaffold_17:45941..47424- (Nannochloropsis oceanica)
ACAGGAGTGTAGGAGAGCGTCCTCTTCTAGGGTTAAGTGCATGTGGAGGA
CAGGGCTTGGCATTTTGATGTTTTGGGCCCGCTTTTCCAAGGCCTCCTTC
ATTGCCTCACCGTACACTGTCGACAGCATCAAAGCTATGGCCTCCCGCCG
CACTCCGCTTGGCATCGCGCACACCTTCAGCGGCTTGGGGCTGGACCGCA
GCCGCGTGGAGACGGAGCTGAAAGAGGTGGCGGCCTTTGAAAGTGCACTG
AAAACCGATGGCGCGGGTACGTGGTTAAGGACGAGAGGTCGGCAGAGCCG
GTGTGTGGGTTGTACTAGCGCACACTTTATTCTACGCATACCGCCTTTCT
AGCCCGACAGCACACCGATAAACAAATCCATTTTAATCTGAAGCTGATAG
GCACACAAAATCGAAAGCCCACCAATCGTCCGCATCATCCACGTTTTATG
CCTCCCCATCTCCGTTTCCCTTCCTTCCGCAGCCTTTGCCTTGTTCCACG
GAACGTCAGCCCTAATCACGAAAGAGAGACAAACCAAGATTGTCTATCAG
ACTGGCGACATGCTCCAAAAGCTTTATGGAATTTCCATCGAACAACTGCA
GCCAACCAACAAAAGCAGCAGACTAACCACCAGCGGTAATAGCTCTTCTG
CACCATACTTTCCGTGTGTCGCGCTCGGTGCATCCGTGAGCGGATGGGCT
TTCGCCGTAGATGTCTCCAAGCGATCCAAAGAGGATGTGGAGAGCAAGGC
AGAGGCAGCTGGAGAAGTCGCCGTCCAGTTTGAACCCGTACGGGCGCTGT
TAGCAGTCCTCACGGAAGAGGACATTGCAGTGGCAGGGCTGGGTGCGTCT
ATTTTGGCCTGGCACCGTCAGCACCAGCACTGTGGAGTGTGTGGCAGTCC
AATGATAGCGGTGGAAGGAGGAGGGCGTCGCGCCTGTACAAGCTGCCGAA
ATCGCGCGTATCCGCGCGTTGATCCCGTCGTAATTGCTTTGGTGACGGAC
CCTGCGAGGGATATGGTGTTGTTAGGACGTCAGAGAGTGTATCGGCCCGG
GATGTTCTCATGTTTAGCTGGGTACGTGAGTCAGTGCGAAAGCTTGGAGG
AGGCTGTACGAAGAGAGGTAAAGGAAGAATCAGGAATCAGCGTGGGGGAT
GTAATGTATCACAGCTCGCAGCCCTGGCCGATTGGGCGGGGGGCGTCGTG
TCAGATAATGGTGGGCTATATCGCGACTGCTACCAGTATGGATATCTCCA
TGGACACGGACGAACTGGAGGATTGCCGGTGGTTTTCTCGGGCCGAAGTG
GCGGGCGCAAAGGAGCTGGTTGTGTCCGCAGCGTTGGACCCAACGGGGGA
AAACCCGGGTGGGTTGAGTATTCCTGGGCCTTACGCGATAGCGCATCATT
TGATCAAGCACTGGCTGTTGACGACGACGCCGCAAGAAGCGTCAGGAGGA
CGTAATAAATTATGAAAAATGTATTTGGGCCGAG back to topCoding sequence (CDS) from alignment at scaffold_17:45941..47424- >mRNA_6765 ID=mRNA_6765|Name=jgi.p|Nanoce1779_2|596254|organism=Nannochloropsis oceanica|type=CDS|length=906bp|location=Sequence derived from alignment at scaffold_17:45941..47424- (Nannochloropsis oceanica)
ATGCTCCAAAAGCTTTATGGAATTTCCATCGAACAACTGCAGCCAACCAA
CAAAAGCAGCAGACTAACCACCAGCGGTAATAGCTCTTCTGCACCATACT
TTCCGTGTGTCGCGCTCGGTGCATCCGTGAGCGGATGGGCTTTCGCCGTA
GATGTCTCCAAGCGATCCAAAGAGGATGTGGAGAGCAAGGCAGAGGCAGC
TGGAGAAGTCGCCGTCCAGTTTGAACCCGTACGGGCGCTGTTAGCAGTCC
TCACGGAAGAGGACATTGCAGTGGCAGGGCTGGGTGCGTCTATTTTGGCC
TGGCACCGTCAGCACCAGCACTGTGGAGTGTGTGGCAGTCCAATGATAGC
GGTGGAAGGAGGAGGGCGTCGCGCCTGTACAAGCTGCCGAAATCGCGCGT
ATCCGCGCGTTGATCCCGTCGTAATTGCTTTGGTGACGGACCCTGCGAGG
GATATGGTGTTGTTAGGACGTCAGAGAGTGTATCGGCCCGGGATGTTCTC
ATGTTTAGCTGGGTACGTGAGTCAGTGCGAAAGCTTGGAGGAGGCTGTAC
GAAGAGAGGTAAAGGAAGAATCAGGAATCAGCGTGGGGGATGTAATGTAT
CACAGCTCGCAGCCCTGGCCGATTGGGCGGGGGGCGTCGTGTCAGATAAT
GGTGGGCTATATCGCGACTGCTACCAGTATGGATATCTCCATGGACACGG
ACGAACTGGAGGATTGCCGGTGGTTTTCTCGGGCCGAAGTGGCGGGCGCA
AAGGAGCTGGTTGTGTCCGCAGCGTTGGACCCAACGGGGGAAAACCCGGG
TGGGTTGAGTATTCCTGGGCCTTACGCGATAGCGCATCATTTGATCAAGC
ACTGGCTGTTGACGACGACGCCGCAAGAAGCGTCAGGAGGACGTAATAAA
TTATGA back to top
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