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Properties
| Property Name | Value |
|---|
| TranscriptId | 596320 |
| Track | FilteredModels2 |
| ProteinId | 596234 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:22624..24958 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6759 ID=mRNA_6759|Name=jgi.p|Nanoce1779_2|596234|organism=Nannochloropsis oceanica|type=mRNA|length=1981bp
ACAGACGCACTCAAAATTTTGCCTTCATCGTGATCTGGATGGCTGCGCGG
TTGCTGTCGGCCGGCAGGAGATAGAGAAGGACCAAGCAGCTAGCCTCCCT
CCCCCAGTCCTCATTACACGAGCACCAGTTGGCTCTCCATTTGGTCCAAG
CGACGCGATAACGTATAGGATGGAGTCATCTTTGTCGTCGGGTGGAGGAT
TCCCCTTTGAGCGGAGTCCTCCTTACGACGGTACGAATGGTGACGGCTTT
ACCCAACGAGCGCCTTCCCAGGAGGAAGGGAGCATCGAGCATGAAGGCCA
AGAGCAGGACCATCAGTGGACAGGCCCACCACCACCCCCGTCCCAACCTC
CTCCTCCACCACGACCAGCTTCGCGACAATATCTCCAGCAGCCGATCCTG
CCACCATCACCCTCGGCGTCGACTTTCATCCCAGCTTCTGGCGCTCAACA
GCAGCAATGGCCCCCTTCCCACACGAGTCCAGCGGGAGCAGAGGATGCAG
ACGTCTTGCTGCTGCTGGAGGAAAGAGAAGTCTTGCGGGAACAACTCCGG
CAACAGATTGCTGAGAAGGGGGAGCTTGAGAGGCAGCATCGGGCAGACAA
GGAACGACTTGCGGTGGTAGAGGAGGCTTTGGACGAAAGCACGCGCATGT
ACAAGCATGCCAAAGAAGCCGCACAGCAATGCTCAAATGATGCCACTGAG
GCTATGGCAGAGCTACGGACCAGCCAAATACTTCGAGAGCAACTTCACAC
GTCCTTGGAGACAGCACTAGGCGAACTTGAACGTTTGTACGCGGGCATGC
ACTCTGATTCTGGACTCCTCCAAAGCGACGGACGAGCCATGGGCCTGGCG
CAAGAACAGCAACAGCAGGCCGATACACACCTCCCTTTAGACGACAACAC
TGCATACGACCTCACTTATGCGCAGCGAAGGGCCTCGGTCATCATCCACA
TGCTAGAGCTCCTGCACGAACGCTTTGCCGTCACCGTGACATTCCGTCGT
GCTTTCGCCTTACGGATTTTCTTCGCTTTTTGGCGGGAGAGATTTCCTTC
CTTATTTTCGGAGATCGAGGTGGGGGAGGAGGGGGAGGAAATTGAATATG
GAGCAGAAGGAGTATTAGTAGCAGCAGGAGGAGCAAGGGGGAGAGCAAGA
TGTATGATTAATAATTGCGTTAGCCTCGTTGAGGATATTTTGCACCATCC
CGAGGAGCGTCACCAGGACCAGCAACAGCAGCAGCAACAGCAGTACCGTC
CACCGCAAACACCGCAGCAGCTGCGGTTTCGTTCCTCCACACTACGCCCC
ACCTTGTCCTTACGAGGAGGTGAAAGGGAAAGCCCTGCCCCCTCCTTCGT
CTCCGCCCCCTCCTCCCTCGCAGATAGGGGTCGAGAGCGATTGCTCCGAA
AGGAAGTTGCAGATCTCCAAGCCGAAGTACAATCCCGAGAAGAAGTCCAA
AACGTGTTGCTTGACATTCTCGCTTCGTACGAAAGGAAGAATTTGGATTT
GAATTTTGCCGATAGTGGGGAGGAAGTATGGTGGGAGGAAGGATCTGTCA
GTGGTGGGAGGAAGGGGGAGGAGGGAGCTGGGGATGATTTTACCACCATT
TTTAGTGGAGGTAGAAGTAGCAGCCGCGGAGCAGGAGGGAAAGGGAGAGG
AAGAGAAGGAAGAGGAGTGGGAGAGGGGGCAGGGGGTGGAGCTCATTTGA
TATGGAGAGTTGAGAATTTTTGCCGCGTTGTGCAGCAAGCGTTAGAGGAG
CGAAAAGCTTGGACAGAGCATATGGAACGGTCTTTAGTAAATTGCGTCTG
TCAATCTCGTTAGATTTATTCAGCAGAGGTGCAGAAAGAGATGGGAGAGC
GAAGCAAACTTTTTCAGTCGTTGTCATGATGTAAGGCTGGGGCCTACATA
GCCTTCCAAGACAAAAGCACTCAGGTCACAATGAGAAAGAAGAAAAATGA
CGAGCTCGAGCACATATCAGCGAGTAGAATC back to topprotein sequence of jgi.p|Nanoce1779_2|596234 >mRNA_6759-protein ID=mRNA_6759-protein|Name=jgi.p|Nanoce1779_2|596234|organism=Nannochloropsis oceanica|type=polypeptide|length=548bp
MESSLSSGGGFPFERSPPYDGTNGDGFTQRAPSQEEGSIEHEGQEQDHQW
TGPPPPPSQPPPPPRPASRQYLQQPILPPSPSASTFIPASGAQQQQWPPS
HTSPAGAEDADVLLLLEEREVLREQLRQQIAEKGELERQHRADKERLAVV
EEALDESTRMYKHAKEAAQQCSNDATEAMAELRTSQILREQLHTSLETAL
GELERLYAGMHSDSGLLQSDGRAMGLAQEQQQQADTHLPLDDNTAYDLTY
AQRRASVIIHMLELLHERFAVTVTFRRAFALRIFFAFWRERFPSLFSEIE
VGEEGEEIEYGAEGVLVAAGGARGRARCMINNCVSLVEDILHHPEERHQD
QQQQQQQQYRPPQTPQQLRFRSSTLRPTLSLRGGERESPAPSFVSAPSSL
ADRGRERLLRKEVADLQAEVQSREEVQNVLLDILASYERKNLDLNFADSG
EEVWWEEGSVSGGRKGEEGAGDDFTTIFSGGRSSSRGAGGKGRGREGRGV
GEGAGGGAHLIWRVENFCRVVQQALEERKAWTEHMERSLVNCVCQSR* back to topmRNA from alignment at scaffold_17:22624..24958- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6759 ID=mRNA_6759|Name=jgi.p|Nanoce1779_2|596234|organism=Nannochloropsis oceanica|type=mRNA|length=2335bp|location=Sequence derived from alignment at scaffold_17:22624..24958- (Nannochloropsis oceanica)
ACAGACGCACTCAAAATTTTGCCTTCATCGTGATCTGGATGGCTGCGCGG
TTGCTGTCGGCCGGCAGGAGATAGAGAAGGACCAAGCAGCTAGCCTCCCT
CCCCCAGTCCTCATTACACGAGCACCAGTTGGCTCTCCATTTGGTCCAAG
CGACGCGATAACGTATAGGATGGAGTCATCTTTGTCGTCGGGTGGAGGAT
TCCCCTTTGAGCGGAGTCCTCCTTACGACGGTACGAATGGTGACGGCTTT
ACCCAACGAGCGCCTTCCCAGGAGGAAGGGAGCATCGAGCATGAAGGCCA
AGAGCAGGACCATCAGTGGACAGGCCCACCACCACCCCCGTCCCAACCTC
CTCCTCCACCACGACCAGCTTCGCGACAATATCTCCAGCAGCCGATCCTG
CCACCATCACCCTCGGCGTCGACTTTCATCCCAGCTTCTGGCGCTCAACA
GCAGCAATGGCCCCCTTCCCACACGAGTCCAGCGGGAGCAGAGGATGCAG
ACGTCTTGCTGCTGCTGGAGGAAAGAGAAGTCTTGCGGGAACAACTCCGG
CAACAGATTGCTGAGAAGGGGGAGCTTGAGAGGCAGCATCGGGCAGACAA
GGAACGACTTGCGGTGGTAGAGGAGGCTTTGGACGAAAGCACGCGCATGT
ACAAGCATGCCAAAGAAGCCGCACAGCAATGCTCAAATGATGCCACGTGA
GTATGAAGAAAGGGAAGGTATTGGAGGACAGTATTCCACCTATATAGCAT
TTGAATGATGCCACTACTTTGGTCTTAAGACGTCATTGTCGCAACGCTGC
AGCTATTCAAAAGGACAAAATAAGAACGTACTCACTGATAATACCCTTTC
CCTTCACATCCTTACAACAAACCAATGCGACCTAGTGAGGCTATGGCAGA
GCTACGGACCAGCCAAATACTTCGAGAGCAACTTCACACGTCCTTGGAGA
CAGCACTAGGCGAACTTGAACGTTTGTACGCGGGCATGCACTCTGTAAGT
AGACGAGGAATCAACAAATACACTCTCAAGAACAACGAAAAATGTCGGTG
GGAAGGGGCGGAAGTGATTAGTTGAGCGCTTCCCAAGAGTGAGAGCAACA
TGATTATATAGCACTCGTGGACACATTTCGATCCTCGCCGCACCTTCCCA
CATACACAGGATTCTGGACTCCTCCAAAGCGACGGACGAGCCATGGGCCT
GGCGCAAGAACAGCAACAGCAGGCCGATACACACCTCCCTTTAGACGACA
ACACTGCATACGACCTCACTTATGCGCAGCGAAGGGCCTCGGTCATCATC
CACATGCTAGAGCTCCTGCACGAACGCTTTGCCGTCACCGTGACATTCCG
TCGTGCTTTCGCCTTACGGATTTTCTTCGCTTTTTGGCGGGAGAGATTTC
CTTCCTTATTTTCGGAGATCGAGGTGGGGGAGGAGGGGGAGGAAATTGAA
TATGGAGCAGAAGGAGTATTAGTAGCAGCAGGAGGAGCAAGGGGGAGAGC
AAGATGTATGATTAATAATTGCGTTAGCCTCGTTGAGGATATTTTGCACC
ATCCCGAGGAGCGTCACCAGGACCAGCAACAGCAGCAGCAACAGCAGTAC
CGTCCACCGCAAACACCGCAGCAGCTGCGGTTTCGTTCCTCCACACTACG
CCCCACCTTGTCCTTACGAGGAGGTGAAAGGGAAAGCCCTGCCCCCTCCT
TCGTCTCCGCCCCCTCCTCCCTCGCAGATAGGGGTCGAGAGCGATTGCTC
CGAAAGGAAGTTGCAGATCTCCAAGCCGAAGTACAATCCCGAGAAGAAGT
CCAAAACGTGTTGCTTGACATTCTCGCTTCGTACGAAAGGAAGAATTTGG
ATTTGAATTTTGCCGATAGTGGGGAGGAAGTATGGTGGGAGGAAGGATCT
GTCAGTGGTGGGAGGAAGGGGGAGGAGGGAGCTGGGGATGATTTTACCAC
CATTTTTAGTGGAGGTAGAAGTAGCAGCCGCGGAGCAGGAGGGAAAGGGA
GAGGAAGAGAAGGAAGAGGAGTGGGAGAGGGGGCAGGGGGTGGAGCTCAT
TTGATATGGAGAGTTGAGAATTTTTGCCGCGTTGTGCAGCAAGCGTTAGA
GGAGCGAAAAGCTTGGACAGAGCATATGGAACGGTCTTTAGTAAATTGCG
TCTGTCAATCTCGTTAGATTTATTCAGCAGAGGTGCAGAAAGAGATGGGA
GAGCGAAGCAAACTTTTTCAGTCGTTGTCATGATGTAAGGCTGGGGCCTA
CATAGCCTTCCAAGACAAAAGCACTCAGGTCACAATGAGAAAGAAGAAAA
ATGACGAGCTCGAGCACATATCAGCGAGTAGAATC back to topCoding sequence (CDS) from alignment at scaffold_17:22624..24958- >mRNA_6759 ID=mRNA_6759|Name=jgi.p|Nanoce1779_2|596234|organism=Nannochloropsis oceanica|type=CDS|length=4932bp|location=Sequence derived from alignment at scaffold_17:22624..24958- (Nannochloropsis oceanica)
GATTCTGGACTCCTCCAAAGCGACGGACGAGCCATGGGCCTGGCGCAAGA
ACAGCAACAGCAGGCCGATACACACCTCCCTTTAGACGACAACACTGCAT
ACGACCTCACTTATGCGCAGCGAAGGGCCTCGGTCATCATCCACATGCTA
GAGCTCCTGCACGAACGCTTTGCCGTCACCGTGACATTCCGTCGTGCTTT
CGCCTTACGGATTTTCTTCGCTTTTTGGCGGGAGAGATTTCCTTCCTTAT
TTTCGGAGATCGAGGTGGGGGAGGAGGGGGAGGAAATTGAATATGGAGCA
GAAGGAGTATTAGTAGCAGCAGGAGGAGCAAGGGGGAGAGCAAGATGTAT
GATTAATAATTGCGTTAGCCTCGTTGAGGATATTTTGCACCATCCCGAGG
AGCGTCACCAGGACCAGCAACAGCAGCAGCAACAGCAGTACCGTCCACCG
CAAACACCGCAGCAGCTGCGGTTTCGTTCCTCCACACTACGCCCCACCTT
GTCCTTACGAGGAGGTGAAAGGGAAAGCCCTGCCCCCTCCTTCGTCTCCG
CCCCCTCCTCCCTCGCAGATAGGGGTCGAGAGCGATTGCTCCGAAAGGAA
GTTGCAGATCTCCAAGCCGAAGTACAATCCCGAGAAGAAGTCCAAAACGT
GTTGCTTGACATTCTCGCTTCGTACGAAAGGAAGAATTTGGATTTGAATT
TTGCCGATAGTGGGGAGGAAGTATGGTGGGAGGAAGGATCTGTCAGTGGT
GGGAGGAAGGGGGAGGAGGGAGCTGGGGATGATTTTACCACCATTTTTAG
TGGAGGTAGAAGTAGCAGCCGCGGAGCAGGAGGGAAAGGGAGAGGAAGAG
AAGGAAGAGGAGTGGGAGAGGGGGCAGGGGGTGGAGCTCATTTGATATGG
AGAGTTGAGAATTTTTGCCGCGTTGTGCAGCAAGCGTTAGAGGAGCGAAA
AGCTTGGACAGAGCATATGGAACGGTCTTTAGTAAATTGCGTCTGTCAAT
CTCGTTAGTGAGGCTATGGCAGAGCTACGGACCAGCCAAATACTTCGAGA
GCAACTTCACACGTCCTTGGAGACAGCACTAGGCGAACTTGAACGTTTGT
ACGCGGGCATGCACTCTATGGAGTCATCTTTGTCGTCGGGTGGAGGATTC
CCCTTTGAGCGGAGTCCTCCTTACGACGGTACGAATGGTGACGGCTTTAC
CCAACGAGCGCCTTCCCAGGAGGAAGGGAGCATCGAGCATGAAGGCCAAG
AGCAGGACCATCAGTGGACAGGCCCACCACCACCCCCGTCCCAACCTCCT
CCTCCACCACGACCAGCTTCGCGACAATATCTCCAGCAGCCGATCCTGCC
ACCATCACCCTCGGCGTCGACTTTCATCCCAGCTTCTGGCGCTCAACAGC
AGCAATGGCCCCCTTCCCACACGAGTCCAGCGGGAGCAGAGGATGCAGAC
GTCTTGCTGCTGCTGGAGGAAAGAGAAGTCTTGCGGGAACAACTCCGGCA
ACAGATTGCTGAGAAGGGGGAGCTTGAGAGGCAGCATCGGGCAGACAAGG
AACGACTTGCGGTGGTAGAGGAGGCTTTGGACGAAAGCACGCGCATGTAC
AAGCATGCCAAAGAAGCCGCACAGCAATGCTCAAATGATGCCACGATTCT
GGACTCCTCCAAAGCGACGGACGAGCCATGGGCCTGGCGCAAGAACAGCA
ACAGCAGGCCGATACACACCTCCCTTTAGACGACAACACTGCATACGACC
TCACTTATGCGCAGCGAAGGGCCTCGGTCATCATCCACATGCTAGAGCTC
CTGCACGAACGCTTTGCCGTCACCGTGACATTCCGTCGTGCTTTCGCCTT
ACGGATTTTCTTCGCTTTTTGGCGGGAGAGATTTCCTTCCTTATTTTCGG
AGATCGAGGTGGGGGAGGAGGGGGAGGAAATTGAATATGGAGCAGAAGGA
GTATTAGTAGCAGCAGGAGGAGCAAGGGGGAGAGCAAGATGTATGATTAA
TAATTGCGTTAGCCTCGTTGAGGATATTTTGCACCATCCCGAGGAGCGTC
ACCAGGACCAGCAACAGCAGCAGCAACAGCAGTACCGTCCACCGCAAACA
CCGCAGCAGCTGCGGTTTCGTTCCTCCACACTACGCCCCACCTTGTCCTT
ACGAGGAGGTGAAAGGGAAAGCCCTGCCCCCTCCTTCGTCTCCGCCCCCT
CCTCCCTCGCAGATAGGGGTCGAGAGCGATTGCTCCGAAAGGAAGTTGCA
GATCTCCAAGCCGAAGTACAATCCCGAGAAGAAGTCCAAAACGTGTTGCT
TGACATTCTCGCTTCGTACGAAAGGAAGAATTTGGATTTGAATTTTGCCG
ATAGTGGGGAGGAAGTATGGTGGGAGGAAGGATCTGTCAGTGGTGGGAGG
AAGGGGGAGGAGGGAGCTGGGGATGATTTTACCACCATTTTTAGTGGAGG
TAGAAGTAGCAGCCGCGGAGCAGGAGGGAAAGGGAGAGGAAGAGAAGGAA
GAGGAGTGGGAGAGGGGGCAGGGGGTGGAGCTCATTTGATATGGAGAGTT
GAGAATTTTTGCCGCGTTGTGCAGCAAGCGTTAGAGGAGCGAAAAGCTTG
GACAGAGCATATGGAACGGTCTTTAGTAAATTGCGTCTGTCAATCTCGTT
AGTGAGGCTATGGCAGAGCTACGGACCAGCCAAATACTTCGAGAGCAACT
TCACACGTCCTTGGAGACAGCACTAGGCGAACTTGAACGTTTGTACGCGG
GCATGCACTCTATGGAGTCATCTTTGTCGTCGGGTGGAGGATTCCCCTTT
GAGCGGAGTCCTCCTTACGACGGTACGAATGGTGACGGCTTTACCCAACG
AGCGCCTTCCCAGGAGGAAGGGAGCATCGAGCATGAAGGCCAAGAGCAGG
ACCATCAGTGGACAGGCCCACCACCACCCCCGTCCCAACCTCCTCCTCCA
CCACGACCAGCTTCGCGACAATATCTCCAGCAGCCGATCCTGCCACCATC
ACCCTCGGCGTCGACTTTCATCCCAGCTTCTGGCGCTCAACAGCAGCAAT
GGCCCCCTTCCCACACGAGTCCAGCGGGAGCAGAGGATGCAGACGTCTTG
CTGCTGCTGGAGGAAAGAGAAGTCTTGCGGGAACAACTCCGGCAACAGAT
TGCTGAGAAGGGGGAGCTTGAGAGGCAGCATCGGGCAGACAAGGAACGAC
TTGCGGTGGTAGAGGAGGCTTTGGACGAAAGCACGCGCATGTACAAGCAT
GCCAAAGAAGCCGCACAGCAATGCTCAAATGATGCCACGATTCTGGACTC
CTCCAAAGCGACGGACGAGCCATGGGCCTGGCGCAAGAACAGCAACAGCA
GGCCGATACACACCTCCCTTTAGACGACAACACTGCATACGACCTCACTT
ATGCGCAGCGAAGGGCCTCGGTCATCATCCACATGCTAGAGCTCCTGCAC
GAACGCTTTGCCGTCACCGTGACATTCCGTCGTGCTTTCGCCTTACGGAT
TTTCTTCGCTTTTTGGCGGGAGAGATTTCCTTCCTTATTTTCGGAGATCG
AGGTGGGGGAGGAGGGGGAGGAAATTGAATATGGAGCAGAAGGAGTATTA
GTAGCAGCAGGAGGAGCAAGGGGGAGAGCAAGATGTATGATTAATAATTG
CGTTAGCCTCGTTGAGGATATTTTGCACCATCCCGAGGAGCGTCACCAGG
ACCAGCAACAGCAGCAGCAACAGCAGTACCGTCCACCGCAAACACCGCAG
CAGCTGCGGTTTCGTTCCTCCACACTACGCCCCACCTTGTCCTTACGAGG
AGGTGAAAGGGAAAGCCCTGCCCCCTCCTTCGTCTCCGCCCCCTCCTCCC
TCGCAGATAGGGGTCGAGAGCGATTGCTCCGAAAGGAAGTTGCAGATCTC
CAAGCCGAAGTACAATCCCGAGAAGAAGTCCAAAACGTGTTGCTTGACAT
TCTCGCTTCGTACGAAAGGAAGAATTTGGATTTGAATTTTGCCGATAGTG
GGGAGGAAGTATGGTGGGAGGAAGGATCTGTCAGTGGTGGGAGGAAGGGG
GAGGAGGGAGCTGGGGATGATTTTACCACCATTTTTAGTGGAGGTAGAAG
TAGCAGCCGCGGAGCAGGAGGGAAAGGGAGAGGAAGAGAAGGAAGAGGAG
TGGGAGAGGGGGCAGGGGGTGGAGCTCATTTGATATGGAGAGTTGAGAAT
TTTTGCCGCGTTGTGCAGCAAGCGTTAGAGGAGCGAAAAGCTTGGACAGA
GCATATGGAACGGTCTTTAGTAAATTGCGTCTGTCAATCTCGTTAGTGAG
GCTATGGCAGAGCTACGGACCAGCCAAATACTTCGAGAGCAACTTCACAC
GTCCTTGGAGACAGCACTAGGCGAACTTGAACGTTTGTACGCGGGCATGC
ACTCTATGGAGTCATCTTTGTCGTCGGGTGGAGGATTCCCCTTTGAGCGG
AGTCCTCCTTACGACGGTACGAATGGTGACGGCTTTACCCAACGAGCGCC
TTCCCAGGAGGAAGGGAGCATCGAGCATGAAGGCCAAGAGCAGGACCATC
AGTGGACAGGCCCACCACCACCCCCGTCCCAACCTCCTCCTCCACCACGA
CCAGCTTCGCGACAATATCTCCAGCAGCCGATCCTGCCACCATCACCCTC
GGCGTCGACTTTCATCCCAGCTTCTGGCGCTCAACAGCAGCAATGGCCCC
CTTCCCACACGAGTCCAGCGGGAGCAGAGGATGCAGACGTCTTGCTGCTG
CTGGAGGAAAGAGAAGTCTTGCGGGAACAACTCCGGCAACAGATTGCTGA
GAAGGGGGAGCTTGAGAGGCAGCATCGGGCAGACAAGGAACGACTTGCGG
TGGTAGAGGAGGCTTTGGACGAAAGCACGCGCATGTACAAGCATGCCAAA
GAAGCCGCACAGCAATGCTCAAATGATGCCAC back to top
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