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Properties
| Property Name | Value |
|---|
| TranscriptId | 112047 |
| Track | FilteredModels2 |
| ProteinId | 111961 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_17 | supercontig | scaffold_17:16298..18114 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6755 ID=mRNA_6755|Name=jgi.p|Nanoce1779_2|111961|organism=Nannochloropsis oceanica|type=mRNA|length=1090bp
CTTTTCCTTCAGTGCGCGAAGACCAAGCGCAGCAACGGGTTTTGTCCTTC
CTACCGCCAGCCACGCCTCTCTATGGACTAAATCTGCCATGCGTCCTTCT
GCATCCTACTTGCGGGTAGCCGAGACGCAGGAACAGGAGAAGCAGCAACC
ACTCTACCCAAGGAATACCAAGAGCAGCAGACGCAGCAGCAATTTGATCC
CCGTCCCAACTCAAAATCTTGGCCCCCAAAGTGGAGGCATGGAGAAAAAA
TTGGGGGACTCACTTATTAAGGGATTCAAGAAGGCTAGCGCCGTGGGCCT
GGCTGTGGTGCTAAGCGGCATCATCTTAGTGGGGAGCATGCCGGTGGTCT
CCCATGCTGCCTCCGCCTCACTAGCGGAATTAACGGCCGGCGCTTCCTCC
TCCTATAACAGCGTGGTGGCCAAGCTGGCTGCCTCGGGGTTCTTGCAGGC
CTTCTCCCTGGTGTTCGTCTCCGAGATTGGGGACAAGACCTTTTTCATCG
CCGGTTTGTTGGCCATGAAGACGTCGAGGCTCATTTCTTTCACCGGCTCG
ATGGCTGCGTTGTCAGTGATGACCATTATCTCAGTTTTGATCGGCCAGGT
GTTCCACGCTATCCCGTCGGGCCTGGCGGGCGGTTTCAAATTTGACCAGT
GGGTTGCTGTCCTAGCTTTTTCGTACTTTGGACTTAAGACGCTCAAGGAT
TCGTACGAAATGGCGGACGGTGACTCTTCTGGCATGGACGAAGAGCGGTC
CGAGGCCGAGAAGGCCGTCGAGGAGTCCAGCGCCCCGGAGCAGAGGACCC
CCTGGGGCACCATCCTCCAAATTTTCTCCCTTGTTTTCGCTGCTGAATTT
GGTGACCGTTCGTTTTTGTCAACGATTGCCTTGGGTGCTGCCCAGAACCC
TTTTTCTGTGGCCACAGGGGCGATTGGAGCGCATGCGACAGCTACGGGGA
TTGCAGTAGTCAGCGGGGCGTTCCTATCAAAGTACTTTTCTGAAAAGGTT
ATTGGCTTTGTCGGTGGCTCACTTTTTGTCATTTTTGCCGTGACCACCGC
TTTGGGCATTTTCTAAAGTTCACTTGCTAAGTTGAAGGGA back to topprotein sequence of jgi.p|Nanoce1779_2|111961 >mRNA_6755-protein ID=mRNA_6755-protein|Name=jgi.p|Nanoce1779_2|111961|organism=Nannochloropsis oceanica|type=polypeptide|length=326bp
MRPSASYLRVAETQEQEKQQPLYPRNTKSSRRSSNLIPVPTQNLGPQSGG
MEKKLGDSLIKGFKKASAVGLAVVLSGIILVGSMPVVSHAASASLAELTA
GASSSYNSVVAKLAASGFLQAFSLVFVSEIGDKTFFIAGLLAMKTSRLIS
FTGSMAALSVMTIISVLIGQVFHAIPSGLAGGFKFDQWVAVLAFSYFGLK
TLKDSYEMADGDSSGMDEERSEAEKAVEESSAPEQRTPWGTILQIFSLVF
AAEFGDRSFLSTIALGAAQNPFSVATGAIGAHATATGIAVVSGAFLSKYF
SEKVIGFVGGSLFVIFAVTTALGIF* back to topmRNA from alignment at scaffold_17:16298..18114+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6755 ID=mRNA_6755|Name=jgi.p|Nanoce1779_2|111961|organism=Nannochloropsis oceanica|type=mRNA|length=1817bp|location=Sequence derived from alignment at scaffold_17:16298..18114+ (Nannochloropsis oceanica)
CTTTTCCTTCAGTGCGCGAAGACCAAGCGCAGCAACGGGTTTTGTCCTTC
CTACCGCCAGCCACGCCTCTCTATGTAAGTTTCTCTGTGTGCTTTTCCCC
AGCTAAAACGATCCTGGGGGATCGAGGACGATTTATAGCTCCCTTTCCCC
TCCCCTACATTTACCACCATTGCCACATTCAACCCCACGTGATCCTAACA
GGGACTAAATCTGCCATGCGTCCTTCTGCATCCTACTTGCGGGTAGCCGA
GGTGAGTTCTTGTGTATTCCCTGCGATCGGATGGTGGGAGGAGATCTGCG
ACCAATGCTAGCGAGAAGGGAATATTCTTGGGGCAAGCACAAAACAAGCA
AGCCGCTCCCGCTCCATGTCACATATCACATATAGGGTAGAGAATTTTCT
ACTTGCCGCGCCACTCACTTTGTCGTTTTCCCCTTCTATGAACAGACGCA
GGAACAGGAGAAGCAGCAACCACTCTACCCAAGGAATACCAAGAGCAGCA
GACGCAGCAGCAATTTGATCCCCGTCCCAACTCAAAATCTTGGCCCCCAA
AGTGGAGGCATGGAGAAAAAATTGGGGGACTCACTTATTAAGGGAGTAAG
TTTATGTCTGCTGGGAGAAATATATCAAAACATAAACATAAGTAGAAGAC
GAACGGGTTGGGGGTGTGCAACCGAGATGAGACCAATGAGCCACATGCAC
CCTAACATGGGCCCTTCTATCTCTTTCTCCCCTCTCCTTTCGAATTATAG
TTCAAGAAGGCTAGCGCCGTGGGCCTGGCTGTGGTGCTAAGCGGCATCAT
CTTAGTGGGGAGCATGCCGGTGGTCTCCCATGCTGCCTCCGCCTCACTAG
CGGAATTAACGGCCGGCGCTTCCTCCTCCTATAACAGCGTGGTGGCCAAG
CTGGCTGCCTCGGGGTTCTTGCAGGTAATTAGTAGTACTTAAGAGGCTGT
AGAAACGTGGACTGTGAGGAAATTTAGGGCAAGAATAACCCTCTTTCATT
CCCTCCCCTCCCCTCCCCCCCCAGGCCTTCTCCCTGGTGTTCGTCTCCGA
GATTGGGGACAAGACCTTTTTCATCGCCGGTTTGTTGGCCATGAAGACGT
CGAGGCTCATTTCTTTCACCGGCTCGATGGCTGCGTTGTCAGTGATGACC
ATTATCTCAGTTTTGATCGGCCAGGTGTTCCACGCTATCCCGTCGGGCCT
GGCGGGCGGTTTCAAATTTGACCAGTGGGTTGCTGTCCTAGCTTTTTCGT
ACTTTGGACTTAAGACGCTCAAGGTAGGCAGGATAGGATGCATGCGAGTC
TTCTCTTGGTCATTCCACCATAATTTCTTGCTCTTTGTGGCCGCTTCCCC
CCCCGAAAAAAGCTTTATACCACTCTTCTTGTTTCCCCATTCCTCTTTCA
TCTTCCCTCTTTCTGCCACGTCAGGATTCGTACGAAATGGCGGACGGTGA
CTCTTCTGGCATGGACGAAGAGCGGTCCGAGGCCGAGAAGGCCGTCGAGG
AGTCCAGCGCCCCGGAGCAGAGGACCCCCTGGGGCACCATCCTCCAAATT
TTCTCCCTTGTTTTCGCTGCTGAATTTGGTGACCGTTCGTTTTTGTCAAC
GATTGCCTTGGGTGCTGCCCAGAACCCTTTTTCTGTGGCCACAGGGGCGA
TTGGAGCGCATGCGACAGCTACGGGGATTGCAGTAGTCAGCGGGGCGTTC
CTATCAAAGTACTTTTCTGAAAAGGTTATTGGCTTTGTCGGTGGCTCACT
TTTTGTCATTTTTGCCGTGACCACCGCTTTGGGCATTTTCTAAAGTTCAC
TTGCTAAGTTGAAGGGA back to topCoding sequence (CDS) from alignment at scaffold_17:16298..18114+ >mRNA_6755 ID=mRNA_6755|Name=jgi.p|Nanoce1779_2|111961|organism=Nannochloropsis oceanica|type=CDS|length=4890bp|location=Sequence derived from alignment at scaffold_17:16298..18114+ (Nannochloropsis oceanica)
ATGCGTCCTTCTGCATCCTACTTGCGGGTAGCCGAGACGCAGGAACAGGA
GAAGCAGCAACCACTCTACCCAAGGAATACCAAGAGCAGCAGACGCAGCA
GCAATTTGATCCCCGTCCCAACTCAAAATCTTGGCCCCCAAAGTGGAGGC
ATGGAGAAAAAATTGGGGGACTCACTTATTAAGGGATTCAAGAAGGCTAG
CGCCGTGGGCCTGGCTGTGGTGCTAAGCGGCATCATCTTAGTGGGGAGCA
TGCCGGTGGTCTCCCATGCTGCCTCCGCCTCACTAGCGGAATTAACGGCC
GGCGCTTCCTCCTCCTATAACAGCGTGGTGGCCAAGCTGGCTGCCTCGGG
GTTCTTGCAGGCCTTCTCCCTGGTGTTCGTCTCCGAGATTGGGGACAAGA
CCTTTTTCATCGCCGGTTTGTTGGCCATGAAGACGTCGAGGCTCATTTCT
TTCACCGGCTCGATGGCTGCGTTGTCAGTGATGACCATTATCTCAGTTTT
GATCGGCCAGGTGTTCCACGCTATCCCGTCGGGCCTGGCGGGCGGTTTCA
AATTTGACCAGTGGGTTGCTGTCCTAGCTTTTTCGTACTTTGGACTTAAG
ACGCTCAAGGATTCGTACGAAATGGCGGACGGTGACTCTTCTGGCATGGA
CGAAGAGCGGTCCGAGGCCGAGAAGGCCGTCGAGGAGTCCAGCGCCCCGG
AGCAGAGGACCCCCTGGGGCACCATCCTCCAAATTTTCTCCCTTGTTTTC
GCTGCTGAATTTGGTGACCGTTCGTTTTTGTCAACGATTGCCTTGGGTGC
TGCCCAGAACCCTTTTTCTGTGGCCACAGGGGCGATTGGAGCGCATGCGA
CAGCTACGGGGATTGCAGTAGTCAGCGGGGCGTTCCTATCAAAGTACTTT
TCTGAAAAGGTTATTGGCTTTGTCGGTGGCTCACTTTTTGTCATTTTTGC
CGTGACCACCGCTTTGGGCATTTTCTAAATGCGTCCTTCTGCATCCTACT
TGCGGGTAGCCGAGACGCAGGAACAGGAGAAGCAGCAACCACTCTACCCA
AGGAATACCAAGAGCAGCAGACGCAGCAGCAATTTGATCCCCGTCCCAAC
TCAAAATCTTGGCCCCCAAAGTGGAGGCATGGAGAAAAAATTGGGGGACT
CACTTATTAAGGGATTCAAGAAGGCTAGCGCCGTGGGCCTGGCTGTGGTG
CTAAGCGGCATCATCTTAGTGGGGAGCATGCCGGTGGTCTCCCATGCTGC
CTCCGCCTCACTAGCGGAATTAACGGCCGGCGCTTCCTCCTCCTATAACA
GCGTGGTGGCCAAGCTGGCTGCCTCGGGGTTCTTGCAGGCCTTCTCCCTG
GTGTTCGTCTCCGAGATTGGGGACAAGACCTTTTTCATCGCCGGTTTGTT
GGCCATGAAGACGTCGAGGCTCATTTCTTTCACCGGCTCGATGGCTGCGT
TGTCAGTGATGACCATTATCTCAGTTTTGATCGGCCAGGTGTTCCACGCT
ATCCCGTCGGGCCTGGCGGGCGGTTTCAAATTTGACCAGTGGGTTGCTGT
CCTAGCTTTTTCGTACTTTGGACTTAAGACGCTCAAGGATTCGTACGAAA
TGGCGGACGGTGACTCTTCTGGCATGGACGAAGAGCGGTCCGAGGCCGAG
AAGGCCGTCGAGGAGTCCAGCGCCCCGGAGCAGAGGACCCCCTGGGGCAC
CATCCTCCAAATTTTCTCCCTTGTTTTCGCTGCTGAATTTGGTGACCGTT
CGTTTTTGTCAACGATTGCCTTGGGTGCTGCCCAGAACCCTTTTTCTGTG
GCCACAGGGGCGATTGGAGCGCATGCGACAGCTACGGGGATTGCAGTAGT
CAGCGGGGCGTTCCTATCAAAGTACTTTTCTGAAAAGGTTATTGGCTTTG
TCGGTGGCTCACTTTTTGTCATTTTTGCCGTGACCACCGCTTTGGGCATT
TTCTAAATGCGTCCTTCTGCATCCTACTTGCGGGTAGCCGAGACGCAGGA
ACAGGAGAAGCAGCAACCACTCTACCCAAGGAATACCAAGAGCAGCAGAC
GCAGCAGCAATTTGATCCCCGTCCCAACTCAAAATCTTGGCCCCCAAAGT
GGAGGCATGGAGAAAAAATTGGGGGACTCACTTATTAAGGGATTCAAGAA
GGCTAGCGCCGTGGGCCTGGCTGTGGTGCTAAGCGGCATCATCTTAGTGG
GGAGCATGCCGGTGGTCTCCCATGCTGCCTCCGCCTCACTAGCGGAATTA
ACGGCCGGCGCTTCCTCCTCCTATAACAGCGTGGTGGCCAAGCTGGCTGC
CTCGGGGTTCTTGCAGGCCTTCTCCCTGGTGTTCGTCTCCGAGATTGGGG
ACAAGACCTTTTTCATCGCCGGTTTGTTGGCCATGAAGACGTCGAGGCTC
ATTTCTTTCACCGGCTCGATGGCTGCGTTGTCAGTGATGACCATTATCTC
AGTTTTGATCGGCCAGGTGTTCCACGCTATCCCGTCGGGCCTGGCGGGCG
GTTTCAAATTTGACCAGTGGGTTGCTGTCCTAGCTTTTTCGTACTTTGGA
CTTAAGACGCTCAAGGATTCGTACGAAATGGCGGACGGTGACTCTTCTGG
CATGGACGAAGAGCGGTCCGAGGCCGAGAAGGCCGTCGAGGAGTCCAGCG
CCCCGGAGCAGAGGACCCCCTGGGGCACCATCCTCCAAATTTTCTCCCTT
GTTTTCGCTGCTGAATTTGGTGACCGTTCGTTTTTGTCAACGATTGCCTT
GGGTGCTGCCCAGAACCCTTTTTCTGTGGCCACAGGGGCGATTGGAGCGC
ATGCGACAGCTACGGGGATTGCAGTAGTCAGCGGGGCGTTCCTATCAAAG
TACTTTTCTGAAAAGGTTATTGGCTTTGTCGGTGGCTCACTTTTTGTCAT
TTTTGCCGTGACCACCGCTTTGGGCATTTTCTAAATGCGTCCTTCTGCAT
CCTACTTGCGGGTAGCCGAGACGCAGGAACAGGAGAAGCAGCAACCACTC
TACCCAAGGAATACCAAGAGCAGCAGACGCAGCAGCAATTTGATCCCCGT
CCCAACTCAAAATCTTGGCCCCCAAAGTGGAGGCATGGAGAAAAAATTGG
GGGACTCACTTATTAAGGGATTCAAGAAGGCTAGCGCCGTGGGCCTGGCT
GTGGTGCTAAGCGGCATCATCTTAGTGGGGAGCATGCCGGTGGTCTCCCA
TGCTGCCTCCGCCTCACTAGCGGAATTAACGGCCGGCGCTTCCTCCTCCT
ATAACAGCGTGGTGGCCAAGCTGGCTGCCTCGGGGTTCTTGCAGGCCTTC
TCCCTGGTGTTCGTCTCCGAGATTGGGGACAAGACCTTTTTCATCGCCGG
TTTGTTGGCCATGAAGACGTCGAGGCTCATTTCTTTCACCGGCTCGATGG
CTGCGTTGTCAGTGATGACCATTATCTCAGTTTTGATCGGCCAGGTGTTC
CACGCTATCCCGTCGGGCCTGGCGGGCGGTTTCAAATTTGACCAGTGGGT
TGCTGTCCTAGCTTTTTCGTACTTTGGACTTAAGACGCTCAAGGATTCGT
ACGAAATGGCGGACGGTGACTCTTCTGGCATGGACGAAGAGCGGTCCGAG
GCCGAGAAGGCCGTCGAGGAGTCCAGCGCCCCGGAGCAGAGGACCCCCTG
GGGCACCATCCTCCAAATTTTCTCCCTTGTTTTCGCTGCTGAATTTGGTG
ACCGTTCGTTTTTGTCAACGATTGCCTTGGGTGCTGCCCAGAACCCTTTT
TCTGTGGCCACAGGGGCGATTGGAGCGCATGCGACAGCTACGGGGATTGC
AGTAGTCAGCGGGGCGTTCCTATCAAAGTACTTTTCTGAAAAGGTTATTG
GCTTTGTCGGTGGCTCACTTTTTGTCATTTTTGCCGTGACCACCGCTTTG
GGCATTTTCTAAATGCGTCCTTCTGCATCCTACTTGCGGGTAGCCGAGAC
GCAGGAACAGGAGAAGCAGCAACCACTCTACCCAAGGAATACCAAGAGCA
GCAGACGCAGCAGCAATTTGATCCCCGTCCCAACTCAAAATCTTGGCCCC
CAAAGTGGAGGCATGGAGAAAAAATTGGGGGACTCACTTATTAAGGGATT
CAAGAAGGCTAGCGCCGTGGGCCTGGCTGTGGTGCTAAGCGGCATCATCT
TAGTGGGGAGCATGCCGGTGGTCTCCCATGCTGCCTCCGCCTCACTAGCG
GAATTAACGGCCGGCGCTTCCTCCTCCTATAACAGCGTGGTGGCCAAGCT
GGCTGCCTCGGGGTTCTTGCAGGCCTTCTCCCTGGTGTTCGTCTCCGAGA
TTGGGGACAAGACCTTTTTCATCGCCGGTTTGTTGGCCATGAAGACGTCG
AGGCTCATTTCTTTCACCGGCTCGATGGCTGCGTTGTCAGTGATGACCAT
TATCTCAGTTTTGATCGGCCAGGTGTTCCACGCTATCCCGTCGGGCCTGG
CGGGCGGTTTCAAATTTGACCAGTGGGTTGCTGTCCTAGCTTTTTCGTAC
TTTGGACTTAAGACGCTCAAGGATTCGTACGAAATGGCGGACGGTGACTC
TTCTGGCATGGACGAAGAGCGGTCCGAGGCCGAGAAGGCCGTCGAGGAGT
CCAGCGCCCCGGAGCAGAGGACCCCCTGGGGCACCATCCTCCAAATTTTC
TCCCTTGTTTTCGCTGCTGAATTTGGTGACCGTTCGTTTTTGTCAACGAT
TGCCTTGGGTGCTGCCCAGAACCCTTTTTCTGTGGCCACAGGGGCGATTG
GAGCGCATGCGACAGCTACGGGGATTGCAGTAGTCAGCGGGGCGTTCCTA
TCAAAGTACTTTTCTGAAAAGGTTATTGGCTTTGTCGGTGGCTCACTTTT
TGTCATTTTTGCCGTGACCACCGCTTTGGGCATTTTCTAA back to top
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